FFCP PHASE1:Hg19::chr4:87928626..87928670,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000839!9.47e-27!70;CL:0000557!1.50e-26!71;CL:0000763!3.88e-25!112;CL:0000049!3.88e-25!112;CL:0002031!3.57e-23!124;CL:0000766!2.80e-22!76;CL:0002032!6.64e-22!165;CL:0000837!6.64e-22!165;CL:0002009!7.90e-21!65;CL:0000037!1.49e-20!172;CL:0000566!1.49e-20!172;CL:0000738!2.07e-19!140;CL:0000988!8.32e-19!182;CL:0002057!4.39e-18!42;CL:0002194!8.56e-18!63;CL:0000576!8.56e-18!63;CL:0000040!8.56e-18!63;CL:0000559!8.56e-18!63;CL:0000860!1.49e-16!45;CL:0002087!2.86e-13!119;CL:0000134!2.13e-10!358;CL:0002274!2.14e-10!5;CL:0000457!2.14e-10!5;CL:0002191!2.14e-10!5;CL:0000097!2.14e-10!5;CL:0000831!2.14e-10!5;CL:0002028!2.14e-10!5;CL:0002320!5.93e-10!365;CL:0000048!1.65e-09!430;CL:0000723!3.47e-09!436;CL:0000034!8.99e-09!444;CL:0000219!2.14e-08!390;CL:0000163!2.70e-08!9;CL:0000840!6.96e-08!5;CL:0001029!6.96e-08!5;CL:0000990!1.20e-07!8;CL:0001014!3.68e-07!2;CL:0001016!3.68e-07!2 | |ontology_enrichment_celltype=CL:0000839!9.47e-27!70;CL:0000557!1.50e-26!71;CL:0000763!3.88e-25!112;CL:0000049!3.88e-25!112;CL:0002031!3.57e-23!124;CL:0000766!2.80e-22!76;CL:0002032!6.64e-22!165;CL:0000837!6.64e-22!165;CL:0002009!7.90e-21!65;CL:0000037!1.49e-20!172;CL:0000566!1.49e-20!172;CL:0000738!2.07e-19!140;CL:0000988!8.32e-19!182;CL:0002057!4.39e-18!42;CL:0002194!8.56e-18!63;CL:0000576!8.56e-18!63;CL:0000040!8.56e-18!63;CL:0000559!8.56e-18!63;CL:0000860!1.49e-16!45;CL:0002087!2.86e-13!119;CL:0000134!2.13e-10!358;CL:0002274!2.14e-10!5;CL:0000457!2.14e-10!5;CL:0002191!2.14e-10!5;CL:0000097!2.14e-10!5;CL:0000831!2.14e-10!5;CL:0002028!2.14e-10!5;CL:0002320!5.93e-10!365;CL:0000048!1.65e-09!430;CL:0000723!3.47e-09!436;CL:0000034!8.99e-09!444;CL:0000219!2.14e-08!390;CL:0000163!2.70e-08!9;CL:0000840!6.96e-08!5;CL:0001029!6.96e-08!5;CL:0000990!1.20e-07!8;CL:0001014!3.68e-07!2;CL:0001016!3.68e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;8.28e-19;5!CL:0000860;7.75e-15;33!CL:0002057;7.75e-15;33!CL:0000473;1.45e-13;39!CL:0000234;1.45e-13;39!CL:0001014;2.90e-12;2!CL:0001016;2.90e-12;2!CL:0000163;6.70e-11;9!CL:0000576;5.19e-09;48!CL:0000766;9.90e-08;69 | |ontology_enrichment_celltype_v019=CL:0000097;8.28e-19;5!CL:0000860;7.75e-15;33!CL:0002057;7.75e-15;33!CL:0000473;1.45e-13;39!CL:0000234;1.45e-13;39!CL:0001014;2.90e-12;2!CL:0001016;2.90e-12;2!CL:0000163;6.70e-11;9!CL:0000576;5.19e-09;48!CL:0000766;9.90e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.59e-20,67;CL:0000097,7.92e-19,5;CL:0002028,7.92e-19,5;CL:0000839,5.29e-16,66;CL:0000766,1.11e-14,72;CL:0000860,3.00e-13,42;CL:0002057,3.00e-13,42;CL:0002009,9.20e-13,61;CL:0000763,9.49e-13,108;CL:0000049,9.49e-13,108;CL:0001014,2.32e-12,2;CL:0001016,2.32e-12,2;CL:0000473,1.28e-11,48;CL:0000234,1.28e-11,48;CL:0002031,1.84e-11,120;CL:0000163,6.54e-11,9;CL:0000738,4.28e-10,136;CL:0002194,2.51e-09,59;CL:0000576,2.51e-09,59;CL:0000040,2.51e-09,59;CL:0000559,2.51e-09,59;CL:0002032,1.72e-08,161;CL:0000837,1.72e-08,161;CL:0000037,3.99e-08,168;CL:0000988,1.07e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-10;42 | |ontology_enrichment_development_v019=CL:0002057;2.00e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!9.14e-24!86;UBERON:0002371!1.09e-22!80;UBERON:0004765!1.92e-20!101;UBERON:0001434!1.92e-20!101;UBERON:0002390!3.87e-16!102;UBERON:0003061!3.87e-16!102;UBERON:0002405!9.84e-15!115;UBERON:0002193!5.04e-14!112;UBERON:0002204!9.67e-13!167;UBERON:0003081!2.16e-09!216;UBERON:0002384!2.39e-09!375 | |ontology_enrichment_uberon=UBERON:0001474!9.14e-24!86;UBERON:0002371!1.09e-22!80;UBERON:0004765!1.92e-20!101;UBERON:0001434!1.92e-20!101;UBERON:0002390!3.87e-16!102;UBERON:0003061!3.87e-16!102;UBERON:0002405!9.84e-15!115;UBERON:0002193!5.04e-14!112;UBERON:0002204!9.67e-13!167;UBERON:0003081!2.16e-09!216;UBERON:0002384!2.39e-09!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.09e-18,76;UBERON:0001474,8.52e-17,82;UBERON:0004765,2.63e-15,90;UBERON:0002405,8.19e-15,93;UBERON:0002390,4.68e-14,98;UBERON:0003061,4.68e-14,98;UBERON:0001434,8.96e-14,100;UBERON:0002193,9.49e-13,108;UBERON:0002204,3.55e-08,167 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0.242584061187816,0.464858073811369,0,1.23882548358041,0.863077176966451,0.512321413058201,0.236482229888585,0.344745680736619,1.29096936716765,4.06279459783025,0.564727018627814,0.272906150057846,0.224723484445085,0,0.962787081228281,0,0,0.199463657621632,0,0,0,0,2.00998932205395,1.0429658368404,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.985326475791887,0,5.39053100406007,0.720599767084807,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:87928626..87928670,- | |short_description=p@chr4:87928626..87928670,- | ||
}} | }} |
Revision as of 04:17, 19 November 2012
Short description: | p@chr4:87928626..87928670, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:87928626..87928670, - |
Coexpression cluster: | C728_Mast_CD14_Basophils_chorionic_immature_Monocytederived_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.59e-20 | 67 |
mast cell | 7.92e-19 | 5 |
basophil mast progenitor cell | 7.92e-19 | 5 |
myeloid lineage restricted progenitor cell | 5.29e-16 | 66 |
myeloid leukocyte | 1.11e-14 | 72 |
classical monocyte | 3.00e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.00e-13 | 42 |
macrophage dendritic cell progenitor | 9.20e-13 | 61 |
myeloid cell | 9.49e-13 | 108 |
common myeloid progenitor | 9.49e-13 | 108 |
CD1a-positive Langerhans cell | 2.32e-12 | 2 |
immature CD1a-positive Langerhans cell | 2.32e-12 | 2 |
defensive cell | 1.28e-11 | 48 |
phagocyte | 1.28e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 1.84e-11 | 120 |
endocrine cell | 6.54e-11 | 9 |
leukocyte | 4.28e-10 | 136 |
monopoietic cell | 2.51e-09 | 59 |
monocyte | 2.51e-09 | 59 |
monoblast | 2.51e-09 | 59 |
promonocyte | 2.51e-09 | 59 |
hematopoietic oligopotent progenitor cell | 1.72e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-08 | 161 |
hematopoietic stem cell | 3.99e-08 | 168 |
hematopoietic cell | 1.07e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.09e-18 | 76 |
bone element | 8.52e-17 | 82 |
skeletal element | 2.63e-15 | 90 |
immune system | 8.19e-15 | 93 |
hematopoietic system | 4.68e-14 | 98 |
blood island | 4.68e-14 | 98 |
skeletal system | 8.96e-14 | 100 |
hemolymphoid system | 9.49e-13 | 108 |
musculoskeletal system | 3.55e-08 | 167 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.