FFCP PHASE1:Hg19::chr13:28543388..28543406,-: Difference between revisions
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| ||
|short_description=p3@CDX2 | |short_description=p3@CDX2 | ||
}} | }} |
Revision as of 11:11, 20 November 2012
Short description: | p3@CDX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CDX2_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | -71bp_to_NM_001265, uc001urv.2_5end |
EntrezGene: | CDX2 |
HGNC: | 1806 |
UniProt: | Q99626 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.08e-21 | 4 |
epithelial cell of large intestine | 1.24e-19 | 2 |
epithelial cell of alimentary canal | 1.40e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.38e-83 | 17 |
gastrointestinal system | 2.48e-66 | 25 |
large intestine | 2.22e-52 | 11 |
lower digestive tract | 1.31e-45 | 5 |
rectum | 4.57e-37 | 4 |
colon | 1.86e-36 | 9 |
small intestine | 3.20e-29 | 4 |
intestinal mucosa | 1.08e-21 | 4 |
wall of intestine | 1.08e-21 | 4 |
gastrointestinal system mucosa | 1.08e-21 | 4 |
gastrointestinal system epithelium | 1.08e-21 | 4 |
intestinal epithelium | 1.08e-21 | 4 |
subdivision of digestive tract | 1.74e-19 | 118 |
hindgut | 5.15e-17 | 19 |
digestive system | 2.27e-15 | 145 |
digestive tract | 2.27e-15 | 145 |
primitive gut | 2.27e-15 | 145 |
endoderm-derived structure | 1.12e-13 | 160 |
endoderm | 1.12e-13 | 160 |
presumptive endoderm | 1.12e-13 | 160 |
duodenum | 6.97e-13 | 2 |
epithelium of mucosa | 3.90e-11 | 8 |
vermiform appendix | 2.50e-10 | 1 |
caecum | 2.50e-10 | 1 |
midgut | 2.50e-10 | 1 |
hepatopancreatic ampulla | 3.61e-10 | 1 |
extrahepatic bile duct | 3.61e-10 | 1 |
common bile duct | 3.61e-10 | 1 |
duodenal papilla | 3.61e-10 | 1 |
organ system subdivision | 3.63e-10 | 223 |
simple columnar epithelium | 5.92e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.46e-16 | 14 |
adenocarcinoma | 7.11e-09 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.