FFCP PHASE1:Hg19::chr1:149822620..149822635,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002032!1.42e-21!165;CL:0000837!1.42e-21!165;CL:0000037!2.06e-21!172;CL:0000566!2.06e-21!172;CL:0000988!5.43e-20!182;CL:0002057!1.09e-18!42;CL:0000860!1.36e-18!45;CL:0002031!2.89e-18!124;CL:0000738!6.40e-18!140;CL:0000763!2.29e-17!112;CL:0000049!2.29e-17!112;CL:0000557!2.63e-14!71;CL:0000839!4.35e-14!70;CL:0002087!4.93e-14!119;CL:0002009!3.83e-13!65;CL:0000766!5.92e-13!76;CL:0000003!1.66e-12!722;CL:0002194!3.81e-12!63;CL:0000576!3.81e-12!63;CL:0000040!3.81e-12!63;CL:0000559!3.81e-12!63;CL:0000012!7.07e-10!682;CL:0000063!3.32e-09!578;CL:0000548!7.77e-09!679;CL:0000004!7.77e-09!679;CL:0000255!7.77e-09!679;CL:0000219!9.94e-09!390;CL:0000134!2.09e-07!358;CL:0000144!4.05e-07!625;CL:0002320!8.00e-07!365;CL:0002371!8.47e-07!591 | |ontology_enrichment_celltype=CL:0002032!1.42e-21!165;CL:0000837!1.42e-21!165;CL:0000037!2.06e-21!172;CL:0000566!2.06e-21!172;CL:0000988!5.43e-20!182;CL:0002057!1.09e-18!42;CL:0000860!1.36e-18!45;CL:0002031!2.89e-18!124;CL:0000738!6.40e-18!140;CL:0000763!2.29e-17!112;CL:0000049!2.29e-17!112;CL:0000557!2.63e-14!71;CL:0000839!4.35e-14!70;CL:0002087!4.93e-14!119;CL:0002009!3.83e-13!65;CL:0000766!5.92e-13!76;CL:0000003!1.66e-12!722;CL:0002194!3.81e-12!63;CL:0000576!3.81e-12!63;CL:0000040!3.81e-12!63;CL:0000559!3.81e-12!63;CL:0000012!7.07e-10!682;CL:0000063!3.32e-09!578;CL:0000548!7.77e-09!679;CL:0000004!7.77e-09!679;CL:0000255!7.77e-09!679;CL:0000219!9.94e-09!390;CL:0000134!2.09e-07!358;CL:0000144!4.05e-07!625;CL:0002320!8.00e-07!365;CL:0002371!8.47e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.16e-22;33!CL:0002057;6.16e-22;33!CL:0000473;1.63e-17;39!CL:0000234;1.63e-17;39!CL:0000576;7.06e-14;48!CL:0000766;1.41e-10;69 | |ontology_enrichment_celltype_v019=CL:0000860;6.16e-22;33!CL:0002057;6.16e-22;33!CL:0000473;1.63e-17;39!CL:0000234;1.63e-17;39!CL:0000576;7.06e-14;48!CL:0000766;1.41e-10;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.24e-27,42;CL:0002057,4.24e-27,42;CL:0000473,2.35e-26,48;CL:0000234,2.35e-26,48;CL:0000738,1.02e-22,136;CL:0000037,1.94e-22,168;CL:0002031,1.04e-21,120;CL:0002032,1.18e-21,161;CL:0000837,1.18e-21,161;CL:0000557,2.33e-21,67;CL:0000839,4.91e-21,66;CL:0000763,1.47e-20,108;CL:0000049,1.47e-20,108;CL:0000766,2.33e-20,72;CL:0000988,2.59e-20,177;CL:0002009,3.11e-19,61;CL:0002194,1.01e-17,59;CL:0000576,1.01e-17,59;CL:0000040,1.01e-17,59;CL:0000559,1.01e-17,59;CL:0002087,4.89e-16,115;CL:0000134,9.63e-08,354;CL:0000034,1.29e-07,441;CL:0002320,5.13e-07,361;CL:0000048,6.24e-07,427;CL:0000723,7.64e-07,433;CL:0000219,8.09e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-19;42!CL:0000049;3.88e-07;108 | |ontology_enrichment_development_v019=CL:0002057;1.55e-19;42!CL:0000049;3.88e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.27e-14!80;UBERON:0001474!5.50e-13!86;UBERON:0004765!1.51e-11!101;UBERON:0001434!1.51e-11!101;UBERON:0002390!9.12e-10!102;UBERON:0003061!9.12e-10!102;UBERON:0002193!3.44e-08!112;UBERON:0001737!1.22e-07!9;UBERON:0002405!2.35e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!4.27e-14!80;UBERON:0001474!5.50e-13!86;UBERON:0004765!1.51e-11!101;UBERON:0001434!1.51e-11!101;UBERON:0002390!9.12e-10!102;UBERON:0003061!9.12e-10!102;UBERON:0002193!3.44e-08!112;UBERON:0001737!1.22e-07!9;UBERON:0002405!2.35e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.65e-10;9!UBERON:0001557;1.65e-10;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.65e-10;9!UBERON:0001557;1.65e-10;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.85e-20,76;UBERON:0001474,8.89e-18,82;UBERON:0004765,4.41e-17,90;UBERON:0002405,3.49e-16,93;UBERON:0001434,5.15e-14,100;UBERON:0002390,9.52e-14,98;UBERON:0003061,9.52e-14,98;UBERON:0002193,2.16e-12,108;UBERON:0001737,1.67e-10,9;UBERON:0002204,5.49e-07,167 | |||
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| ||
|short_description=p1@HIST2H2AA3,p1@HIST2H2AA4 | |short_description=p1@HIST2H2AA3,p1@HIST2H2AA4 | ||
}} | }} |
Revision as of 23:17, 20 November 2012
Short description: | p1@HIST2H2AA3, p1@HIST2H2AA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HIST2H2AA3_5end, CAGE_peak_1_at_HIST2H2AA4_5end |
Coexpression cluster: | C600_Reticulocytes_CD34_HES3GFP_Hep2_Mesenchymal_iPS_CD4 |
Association with transcript: | 0bp_to_NM_001040874, NM_003516, uc001esx.2_5end |
EntrezGene: | 723790,8337 |
HGNC: | 4736&submit=Submit 29668, 4736 |
UniProt: | Q6FI13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.24e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.24e-27 | 42 |
defensive cell | 2.35e-26 | 48 |
phagocyte | 2.35e-26 | 48 |
leukocyte | 1.02e-22 | 136 |
hematopoietic stem cell | 1.94e-22 | 168 |
hematopoietic lineage restricted progenitor cell | 1.04e-21 | 120 |
hematopoietic oligopotent progenitor cell | 1.18e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-21 | 161 |
granulocyte monocyte progenitor cell | 2.33e-21 | 67 |
myeloid lineage restricted progenitor cell | 4.91e-21 | 66 |
myeloid cell | 1.47e-20 | 108 |
common myeloid progenitor | 1.47e-20 | 108 |
myeloid leukocyte | 2.33e-20 | 72 |
hematopoietic cell | 2.59e-20 | 177 |
macrophage dendritic cell progenitor | 3.11e-19 | 61 |
monopoietic cell | 1.01e-17 | 59 |
monocyte | 1.01e-17 | 59 |
monoblast | 1.01e-17 | 59 |
promonocyte | 1.01e-17 | 59 |
nongranular leukocyte | 4.89e-16 | 115 |
mesenchymal cell | 9.63e-08 | 354 |
stem cell | 1.29e-07 | 441 |
connective tissue cell | 5.13e-07 | 361 |
multi fate stem cell | 6.24e-07 | 427 |
somatic stem cell | 7.64e-07 | 433 |
motile cell | 8.09e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.85e-20 | 76 |
bone element | 8.89e-18 | 82 |
skeletal element | 4.41e-17 | 90 |
immune system | 3.49e-16 | 93 |
skeletal system | 5.15e-14 | 100 |
hematopoietic system | 9.52e-14 | 98 |
blood island | 9.52e-14 | 98 |
hemolymphoid system | 2.16e-12 | 108 |
larynx | 1.67e-10 | 9 |
musculoskeletal system | 5.49e-07 | 167 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.