FFCP PHASE1:Mm9::chr1:99873787..99873804,-: Difference between revisions
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|id=chr1:99873787..99873804,- | |id=chr1:99873787..99873804,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.49e-16!114;UBERON:0004111!3.98e-16!122;UBERON:0004535!1.89e-15!23;UBERON:0001009!1.89e-15!23;UBERON:0007100!6.65e-13!18;UBERON:0000948!6.65e-13!18;UBERON:0005498!6.65e-13!18;UBERON:0004140!6.65e-13!18;UBERON:0009881!6.65e-13!18;UBERON:0004141!6.65e-13!18;UBERON:0003084!6.65e-13!18;UBERON:0007005!6.65e-13!18;UBERON:0004139!6.65e-13!18;UBERON:0004291!6.65e-13!18;UBERON:0004872!1.41e-09!33;UBERON:0000468!1.14e-07!333;UBERON:0003914!1.72e-07!47;UBERON:0004121!1.84e-07!102;UBERON:0000924!1.84e-07!102;UBERON:0006601!1.84e-07!102;UBERON:0000073!3.32e-07!75;UBERON:0001016!3.32e-07!75;UBERON:0000956!3.45e-07!21;UBERON:0001869!3.45e-07!21;UBERON:0000203!3.45e-07!21;UBERON:0000479!4.53e-07!349;UBERON:0001017!7.05e-07!73;UBERON:0005743!7.05e-07!73 | |ontology_enrichment_uberon=UBERON:0000025!3.49e-16!114;UBERON:0004111!3.98e-16!122;UBERON:0004535!1.89e-15!23;UBERON:0001009!1.89e-15!23;UBERON:0007100!6.65e-13!18;UBERON:0000948!6.65e-13!18;UBERON:0005498!6.65e-13!18;UBERON:0004140!6.65e-13!18;UBERON:0009881!6.65e-13!18;UBERON:0004141!6.65e-13!18;UBERON:0003084!6.65e-13!18;UBERON:0007005!6.65e-13!18;UBERON:0004139!6.65e-13!18;UBERON:0004291!6.65e-13!18;UBERON:0004872!1.41e-09!33;UBERON:0000468!1.14e-07!333;UBERON:0003914!1.72e-07!47;UBERON:0004121!1.84e-07!102;UBERON:0000924!1.84e-07!102;UBERON:0006601!1.84e-07!102;UBERON:0000073!3.32e-07!75;UBERON:0001016!3.32e-07!75;UBERON:0000956!3.45e-07!21;UBERON:0001869!3.45e-07!21;UBERON:0000203!3.45e-07!21;UBERON:0000479!4.53e-07!349;UBERON:0001017!7.05e-07!73;UBERON:0005743!7.05e-07!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.33e-16,23;UBERON:0001009,8.33e-16,23;UBERON:0000025,8.83e-16,114;UBERON:0004111,9.96e-16,122;UBERON:0007100,3.41e-13,18;UBERON:0000948,3.41e-13,18;UBERON:0005498,3.41e-13,18;UBERON:0004140,3.41e-13,18;UBERON:0009881,3.41e-13,18;UBERON:0004141,3.41e-13,18;UBERON:0003084,3.41e-13,18;UBERON:0007005,3.41e-13,18;UBERON:0004139,3.41e-13,18;UBERON:0004291,3.41e-13,18;UBERON:0010314,9.60e-13,92;UBERON:0004872,1.54e-09,33;UBERON:0000956,2.47e-07,21;UBERON:0001869,2.47e-07,21;UBERON:0000203,2.47e-07,21;UBERON:0001016,3.60e-07,75;UBERON:0003914,4.14e-07,47;UBERON:0002619,7.65e-07,17;UBERON:0001017,7.74e-07,73;UBERON:0005178,7.91e-07,17;UBERON:0005181,7.91e-07,17;UBERON:0002224,7.91e-07,17;UBERON:0000915,7.91e-07,17;UBERON:0008947,7.91e-07,17;UBERON:0003258,7.91e-07,17 | |||
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| ||
|short_description=p5@Pam | |short_description=p5@Pam | ||
}} | }} |
Revision as of 00:54, 15 November 2012
Short description: | p5@Pam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pam_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 8bp_to_ENSMUST00000167040_5end |
EntrezGene: | Pam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 8.33e-16 | 23 |
circulatory system | 8.33e-16 | 23 |
tube | 8.83e-16 | 114 |
anatomical conduit | 9.96e-16 | 122 |
primary circulatory organ | 3.41e-13 | 18 |
heart | 3.41e-13 | 18 |
primitive heart tube | 3.41e-13 | 18 |
primary heart field | 3.41e-13 | 18 |
anterior lateral plate mesoderm | 3.41e-13 | 18 |
heart tube | 3.41e-13 | 18 |
heart primordium | 3.41e-13 | 18 |
cardiac mesoderm | 3.41e-13 | 18 |
cardiogenic plate | 3.41e-13 | 18 |
heart rudiment | 3.41e-13 | 18 |
structure with developmental contribution from neural crest | 9.60e-13 | 92 |
splanchnic layer of lateral plate mesoderm | 1.54e-09 | 33 |
cerebral cortex | 2.47e-07 | 21 |
cerebral hemisphere | 2.47e-07 | 21 |
pallium | 2.47e-07 | 21 |
nervous system | 3.60e-07 | 75 |
epithelial tube | 4.14e-07 | 47 |
regional part of cerebral cortex | 7.65e-07 | 17 |
central nervous system | 7.74e-07 | 73 |
thoracic cavity element | 7.91e-07 | 17 |
thoracic segment organ | 7.91e-07 | 17 |
thoracic cavity | 7.91e-07 | 17 |
thoracic segment of trunk | 7.91e-07 | 17 |
respiratory primordium | 7.91e-07 | 17 |
endoderm of foregut | 7.91e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.