Personal tools

FFCP PHASE1:Mm9::chr1:134195147..134195177,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=213417|HGNC=|MCL_coexpression_id=1176|UniProt=Q91XA8|association_with_transcript=-25bp_to_ENSMUST00000046071,NM_144810,uc007con.1_5end|description=CAGE_peak_2_at_Klhdc8a_5end|id=chr1:134195147..134195177,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-07,23;CL:0000337,3.55e-07,23;CL:0002321,3.83e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.10e-11!71;UBERON:0003075!9.10e-11!71;UBERON:0007284!9.10e-11!71;UBERON:0004121!2.43e-10!102;UBERON:0000924!2.43e-10!102;UBERON:0006601!2.43e-10!102;UBERON:0000033!3.24e-08!63;UBERON:0000475!2.53e-07!200;UBERON:0001049!7.79e-07!52;UBERON:0005068!7.79e-07!52;UBERON:0006241!7.79e-07!52;UBERON:0007135!7.79e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.95e-12,92;UBERON:0001017,4.46e-09,73;UBERON:0004121,8.23e-09,95;UBERON:0000924,8.23e-09,95;UBERON:0006601,8.23e-09,95;UBERON:0002346,1.49e-08,64;UBERON:0003075,1.49e-08,64;UBERON:0007284,1.49e-08,64;UBERON:0000073,1.64e-08,54;UBERON:0001016,1.68e-08,75;UBERON:0002369,2.25e-08,7;UBERON:0006858,2.25e-08,7;UBERON:0003076,1.03e-07,12;UBERON:0003057,1.03e-07,12;UBERON:0001049,2.22e-07,52;UBERON:0005068,2.22e-07,52;UBERON:0006241,2.22e-07,52;UBERON:0007135,2.22e-07,52|phase1_expression=0.320297694209588,1.74487703819681,3.18499467572675,0,0,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,1.27993938234725,1.60586496747019,1.72269589234506,1.7230479846363,3.01659725760245,0.190023419456374,0.504060259519861,1.10865255327652,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,1.56478268869608,15.6978112593922,29.8773208518882,20.2207095037255,5.45947044338914,12.9377307928474,0,0,0,1.02903774414379,0.573066879877513,2.06268836910977,5.26022798234954,4.7609188134483,3.1691570175309,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0.898800331555214,5.37905627450176,0.311068836925433,0.135005938331691,0,3.42781181284564,1.76694832761291,0.61245399607477,0.287536413054709,0.919218786610021,9.91042928994498,3.70293280447044,3.22573719838111,2.90149833006426,2.8361169516747,3.12548022334056,4.4669279840221,2.8138130501584,6.41752640662602,3.83017161115768,2.70506193518296,2.23679334990361,0.075726193333184,0.226714680320357,0.289864488701678,0.860423876981386,0,0.539703191637817,1.94932925234301,0,0.421333260395256,3.91989741929533,5.45550609666024,4.24007489412408,0,2.56652954828636,5.09610479413291,7.11066703153331,5.62876706629157,4.30711771307668,5.56076889516262,0.79928715803342,0.258937883647172,64.8692147713284,7.63335437770998,17.0500667854799,21.4472412448134,23.3620092856565,20.4604350416126,51.6489690364966,0.741584903203122,0.144599356919912,0,0,0,0,0,1.75668478206928,3.77004072264219,0.510914110417183,0,0.599902730993408,0,5.09288173976397,0.457500602818626,1.13088916901578,2.60736480288415,2.04572365864264,4.36354893575076,5.02947915510049,0,0,0,1.68353484709179,0.130120442962704,2.06911893990126,0.900310649026746,2.86339153887859,4.28629944653366,3.45907044769094,3.93547243150861,1.81092359517311,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.462801338662135,0,0.804820204198858,0.116765342367169,0.822799249567402,2.62667942526552,4.2155780963845,3.94739966048397,3.73235195994786,3.22095405024892,0.841159794256509,1.3377599609307,0,0.528901133327089,0.213288250535234,0,0,0.201683524623343,0,0.570676878337677,0.474529061544512,0.658795818896044,0.754005626400808,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.569003702859245,0.571242563048644,1.1270773567308,0.203651327845314,0.387904974335251,1.26244475802573,2.40298841072178,3.98547399544926,4.39596437955849,4.19550357334122,0.296452627087149,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0.863088412352432,0.486405680325106,1.37280706594041,7.18841032636773,2.60498663367952,3.12037673114561,2.02063102357689,1.4351793081753,1.4473305640901,1.66277871149944,0,0.162964976442026,0,1.17345124144251,0.502518772325447,0.714130922658041,4.09780660501378,1.26108115284953,0.664394068946325,1.75400245523236,1.80249646187312,1.55416483679306,2.4590339958857,0,0,0,0.275936746304732,5.9403718295483,3.7507739709505,3.77050374366353,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,0,0,0.494910368917606,3.98235415019888,0,0.604647113929502,0.565815239267694,0.590603785761546,2.45948118355142,0.516856586336442,0.363533729477506,1.06949213515416,0.316036757935816,4.21674434299995,3.09406629744561,0,0,0.517434735131018,0.643011105094777,0,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0.42366414172764,0,0.65954501176592,0.161464426695906,0.301564624640779,0.238744688006273,0.984845398470368,0,2.59595422814714,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.495920734352016,1.83229159388821,1.29614973291793,1.86401793926078,1.12738587736838,0,0.330916980914195,0.388902376688095,2.45403664607689,2.53434188236167,0.821500670520278,0.781226309063701,0.629156066554265,0.241584120826006,0,0.316011120628178,0,0.205421914329655,0.77952493786677,0,0.596044064343795,0.480781798079875,0.590758108698309,0.302899349844443,0.685861259894999,0.201652370273681,0.584747284438515,0.769694733122636,0.350630706544707,1.58711268530648,0.221985953374065,0.0897138566094757,0.167884616364078,0.965947970160952,0.187682475451182,0,1.71494703263253,0,2.25900737046827,2.30162618253588,2.86447756719698,1.71853182343688,0.685082519770642,0,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0.207574695168353,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,0.551530525350042,0.888986911206461,0.824140228955577,0.962757628775446,0.505394423527595,0.50695859978048,0.565879024158229,0.468207537349412,0.320125762024346,0.746661096422973,0,0.811190281613988,0.77163688185482,0,0.441596760403192,0.685738504770831,0.354951612318675,0,0.726732083161643,0.752875043322645,0.676916863133412,0.548783918618318,0.526139422875686,0.407412341537585,0,0.237270036248348,0.492522411877817,0.409231043169689,0.154936841185966,0.771626443924566,2.49810577937946,0.467863216890817,1.07435527024149,0.191288332068843,0,0|short_description=p2@Klhdc8a}}
|EntrezGene=213417
|HGNC=
|MCL_coexpression_id=1176
|UniProt=Q91XA8
|association_with_transcript=-25bp_to_ENSMUST00000046071,NM_144810,uc007con.1_5end
|description=CAGE_peak_2_at_Klhdc8a_5end
|id=chr1:134195147..134195177,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-07,23;CL:0000337,3.55e-07,23;CL:0002321,3.83e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.10e-11!71;UBERON:0003075!9.10e-11!71;UBERON:0007284!9.10e-11!71;UBERON:0004121!2.43e-10!102;UBERON:0000924!2.43e-10!102;UBERON:0006601!2.43e-10!102;UBERON:0000033!3.24e-08!63;UBERON:0000475!2.53e-07!200;UBERON:0001049!7.79e-07!52;UBERON:0005068!7.79e-07!52;UBERON:0006241!7.79e-07!52;UBERON:0007135!7.79e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.95e-12,92;UBERON:0001017,4.46e-09,73;UBERON:0004121,8.23e-09,95;UBERON:0000924,8.23e-09,95;UBERON:0006601,8.23e-09,95;UBERON:0002346,1.49e-08,64;UBERON:0003075,1.49e-08,64;UBERON:0007284,1.49e-08,64;UBERON:0000073,1.64e-08,54;UBERON:0001016,1.68e-08,75;UBERON:0002369,2.25e-08,7;UBERON:0006858,2.25e-08,7;UBERON:0003076,1.03e-07,12;UBERON:0003057,1.03e-07,12;UBERON:0001049,2.22e-07,52;UBERON:0005068,2.22e-07,52;UBERON:0006241,2.22e-07,52;UBERON:0007135,2.22e-07,52
|phase1_expression=0.320297694209588,1.74487703819681,3.18499467572675,0,0,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0,1.27993938234725,1.60586496747019,1.72269589234506,1.7230479846363,3.01659725760245,0.190023419456374,0.504060259519861,1.10865255327652,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.202753862439029,0.367093504323363,1.56478268869608,15.6978112593922,29.8773208518882,20.2207095037255,5.45947044338914,12.9377307928474,0,0,0,1.02903774414379,0.573066879877513,2.06268836910977,5.26022798234954,4.7609188134483,3.1691570175309,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0.898800331555214,5.37905627450176,0.311068836925433,0.135005938331691,0,3.42781181284564,1.76694832761291,0.61245399607477,0.287536413054709,0.919218786610021,9.91042928994498,3.70293280447044,3.22573719838111,2.90149833006426,2.8361169516747,3.12548022334056,4.4669279840221,2.8138130501584,6.41752640662602,3.83017161115768,2.70506193518296,2.23679334990361,0.075726193333184,0.226714680320357,0.289864488701678,0.860423876981386,0,0.539703191637817,1.94932925234301,0,0.421333260395256,3.91989741929533,5.45550609666024,4.24007489412408,0,2.56652954828636,5.09610479413291,7.11066703153331,5.62876706629157,4.30711771307668,5.56076889516262,0.79928715803342,0.258937883647172,64.8692147713284,7.63335437770998,17.0500667854799,21.4472412448134,23.3620092856565,20.4604350416126,51.6489690364966,0.741584903203122,0.144599356919912,0,0,0,0,0,1.75668478206928,3.77004072264219,0.510914110417183,0,0.599902730993408,0,5.09288173976397,0.457500602818626,1.13088916901578,2.60736480288415,2.04572365864264,4.36354893575076,5.02947915510049,0,0,0,1.68353484709179,0.130120442962704,2.06911893990126,0.900310649026746,2.86339153887859,4.28629944653366,3.45907044769094,3.93547243150861,1.81092359517311,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.462801338662135,0,0.804820204198858,0.116765342367169,0.822799249567402,2.62667942526552,4.2155780963845,3.94739966048397,3.73235195994786,3.22095405024892,0.841159794256509,1.3377599609307,0,0.528901133327089,0.213288250535234,0,0,0.201683524623343,0,0.570676878337677,0.474529061544512,0.658795818896044,0.754005626400808,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.569003702859245,0.571242563048644,1.1270773567308,0.203651327845314,0.387904974335251,1.26244475802573,2.40298841072178,3.98547399544926,4.39596437955849,4.19550357334122,0.296452627087149,0,0.393117990226406,0.224862112384854,0.202860121388503,0,0.50925170356284,0.863088412352432,0.486405680325106,1.37280706594041,7.18841032636773,2.60498663367952,3.12037673114561,2.02063102357689,1.4351793081753,1.4473305640901,1.66277871149944,0,0.162964976442026,0,1.17345124144251,0.502518772325447,0.714130922658041,4.09780660501378,1.26108115284953,0.664394068946325,1.75400245523236,1.80249646187312,1.55416483679306,2.4590339958857,0,0,0,0.275936746304732,5.9403718295483,3.7507739709505,3.77050374366353,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,0,0,0.494910368917606,3.98235415019888,0,0.604647113929502,0.565815239267694,0.590603785761546,2.45948118355142,0.516856586336442,0.363533729477506,1.06949213515416,0.316036757935816,4.21674434299995,3.09406629744561,0,0,0.517434735131018,0.643011105094777,0,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,0.42366414172764,0,0.65954501176592,0.161464426695906,0.301564624640779,0.238744688006273,0.984845398470368,0,2.59595422814714,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.495920734352016,1.83229159388821,1.29614973291793,1.86401793926078,1.12738587736838,0,0.330916980914195,0.388902376688095,2.45403664607689,2.53434188236167,0.821500670520278,0.781226309063701,0.629156066554265,0.241584120826006,0,0.316011120628178,0,0.205421914329655,0.77952493786677,0,0.596044064343795,0.480781798079875,0.590758108698309,0.302899349844443,0.685861259894999,0.201652370273681,0.584747284438515,0.769694733122636,0.350630706544707,1.58711268530648,0.221985953374065,0.0897138566094757,0.167884616364078,0.965947970160952,0.187682475451182,0,1.71494703263253,0,2.25900737046827,2.30162618253588,2.86447756719698,1.71853182343688,0.685082519770642,0,1.35004500046361,0.45032120322422,0.453142408984205,1.55328093525546,0.207574695168353,0.399024873401031,0.341467211508268,0.486213434136588,0.628839487883947,0.551530525350042,0.888986911206461,0.824140228955577,0.962757628775446,0.505394423527595,0.50695859978048,0.565879024158229,0.468207537349412,0.320125762024346,0.746661096422973,0,0.811190281613988,0.77163688185482,0,0.441596760403192,0.685738504770831,0.354951612318675,0,0.726732083161643,0.752875043322645,0.676916863133412,0.548783918618318,0.526139422875686,0.407412341537585,0,0.237270036248348,0.492522411877817,0.409231043169689,0.154936841185966,0.771626443924566,2.49810577937946,0.467863216890817,1.07435527024149,0.191288332068843,0,0
|short_description=p2@Klhdc8a
}}

Revision as of 18:50, 13 September 2013

Short description:p2@Klhdc8a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Klhdc8a_5end
Coexpression cluster:MCL_coexpression_mm9:1176
Association with transcript: -25bp_to_ENSMUST00000046071, NM_144810, uc007con.1_5end
EntrezGene:Klhdc8a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Klhdc8a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C320.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D764.87
adrenal gland, embryo E14.CNhs11038.406-44C57.63
adrenal gland, embryo E16.CNhs11004.1254-43D617.05
adrenal gland, embryo E17.CNhs11043.1263-45I121.45
adrenal gland, embryo E18.CNhs11026.1262-18F523.36
adrenal gland, neonate N00.CNhs11191.1311-23C120.46
adrenal gland, neonate N25.CNhs11223.1377-27I351.65
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C64.29
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G14.22
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D52.40
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H14.20
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.55e-0723
neuroblast (sensu Vertebrata)3.55e-0723
embryonic cell3.83e-0770







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:134195147..134195177,%2B&oldid=2963707"