FFCP PHASE1:Mm9::chr3:20098030..20098070,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=32|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:20098030..20098070,+|id=chr3:20098030..20098070,+|ontology_enrichment_celltype=CL:0000680!2.92e-11!6;CL:0000183!2.92e-11!6;CL:0000187!2.92e-11!6;CL:0000056!2.92e-11!6;CL:0000222!1.59e-09!7;CL:0000355!3.25e-07!9;CL:0002494!9.73e-07!3;CL:0000737!9.73e-07!3;CL:0000746!9.73e-07!3;CL:0000513!9.73e-07!3|ontology_enrichment_celltype_v019_2=CL:0002494,1.04e-13,3;CL:0000737,1.04e-13,3;CL:0000746,1.04e-13,3;CL:0000513,1.04e-13,3;CL:0000680,2.54e-07,6;CL:0000187,2.54e-07,6;CL:0000056,2.54e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!2.56e-20!17;UBERON:0002048!1.94e-18!14;UBERON:0000117!1.94e-18!14;UBERON:0000171!1.94e-18!14;UBERON:0000170!1.94e-18!14;UBERON:0005597!1.94e-18!14;UBERON:0000118!1.94e-18!14;UBERON:0005178!1.24e-14!17;UBERON:0005181!1.24e-14!17;UBERON:0002224!1.24e-14!17;UBERON:0000915!1.24e-14!17;UBERON:0008947!1.24e-14!17;UBERON:0003258!1.24e-14!17;UBERON:0005157!4.74e-13!27;UBERON:0000383!1.62e-08!10;UBERON:0000947!9.49e-08!4;UBERON:0001637!9.49e-08!4;UBERON:0003509!9.49e-08!4;UBERON:0004573!9.49e-08!4;UBERON:0004571!9.49e-08!4;UBERON:0010191!9.49e-08!4;UBERON:0004572!9.49e-08!4;UBERON:0001134!3.25e-07!9;UBERON:0002036!3.25e-07!9;UBERON:0002385!3.25e-07!9;UBERON:0000486!3.25e-07!9;UBERON:0001015!3.25e-07!9;UBERON:0004290!3.25e-07!9;UBERON:0003082!3.25e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.04e-34,14;UBERON:0000117,5.04e-34,14;UBERON:0000171,5.04e-34,14;UBERON:0000170,5.04e-34,14;UBERON:0005597,5.04e-34,14;UBERON:0000118,5.04e-34,14;UBERON:0005153,4.94e-28,17;UBERON:0005178,4.94e-28,17;UBERON:0005181,4.94e-28,17;UBERON:0002224,4.94e-28,17;UBERON:0000915,4.94e-28,17;UBERON:0008947,4.94e-28,17;UBERON:0003258,4.94e-28,17;UBERON:0005157,7.84e-24,20;UBERON:0000065,1.40e-11,41;UBERON:0001004,2.66e-11,42;UBERON:0002100,1.67e-08,90;UBERON:0009569,4.17e-07,66;UBERON:0005911,8.76e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,3.72493471920384,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8798169934987,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,1.17080188714679,0.630540576424764,1.10732344824387,2.39182152986231,5.57135270033509,16.7504432409919,9.9807850421243,0,0,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0.467863216890817,0,0,0,0|short_description=p@chr3:20098030..20098070,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=32 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:20098030..20098070,+ | |||
|id=chr3:20098030..20098070,+ | |||
|ontology_enrichment_celltype=CL:0000680!2.92e-11!6;CL:0000183!2.92e-11!6;CL:0000187!2.92e-11!6;CL:0000056!2.92e-11!6;CL:0000222!1.59e-09!7;CL:0000355!3.25e-07!9;CL:0002494!9.73e-07!3;CL:0000737!9.73e-07!3;CL:0000746!9.73e-07!3;CL:0000513!9.73e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.04e-13,3;CL:0000737,1.04e-13,3;CL:0000746,1.04e-13,3;CL:0000513,1.04e-13,3;CL:0000680,2.54e-07,6;CL:0000187,2.54e-07,6;CL:0000056,2.54e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!2.56e-20!17;UBERON:0002048!1.94e-18!14;UBERON:0000117!1.94e-18!14;UBERON:0000171!1.94e-18!14;UBERON:0000170!1.94e-18!14;UBERON:0005597!1.94e-18!14;UBERON:0000118!1.94e-18!14;UBERON:0005178!1.24e-14!17;UBERON:0005181!1.24e-14!17;UBERON:0002224!1.24e-14!17;UBERON:0000915!1.24e-14!17;UBERON:0008947!1.24e-14!17;UBERON:0003258!1.24e-14!17;UBERON:0005157!4.74e-13!27;UBERON:0000383!1.62e-08!10;UBERON:0000947!9.49e-08!4;UBERON:0001637!9.49e-08!4;UBERON:0003509!9.49e-08!4;UBERON:0004573!9.49e-08!4;UBERON:0004571!9.49e-08!4;UBERON:0010191!9.49e-08!4;UBERON:0004572!9.49e-08!4;UBERON:0001134!3.25e-07!9;UBERON:0002036!3.25e-07!9;UBERON:0002385!3.25e-07!9;UBERON:0000486!3.25e-07!9;UBERON:0001015!3.25e-07!9;UBERON:0004290!3.25e-07!9;UBERON:0003082!3.25e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.04e-34,14;UBERON:0000117,5.04e-34,14;UBERON:0000171,5.04e-34,14;UBERON:0000170,5.04e-34,14;UBERON:0005597,5.04e-34,14;UBERON:0000118,5.04e-34,14;UBERON:0005153,4.94e-28,17;UBERON:0005178,4.94e-28,17;UBERON:0005181,4.94e-28,17;UBERON:0002224,4.94e-28,17;UBERON:0000915,4.94e-28,17;UBERON:0008947,4.94e-28,17;UBERON:0003258,4.94e-28,17;UBERON:0005157,7.84e-24,20;UBERON:0000065,1.40e-11,41;UBERON:0001004,2.66e-11,42;UBERON:0002100,1.67e-08,90;UBERON:0009569,4.17e-07,66;UBERON:0005911,8.76e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,3.72493471920384,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8798169934987,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,1.17080188714679,0.630540576424764,1.10732344824387,2.39182152986231,5.57135270033509,16.7504432409919,9.9807850421243,0,0,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0.170870880797853,0,0,0,0,0.228778173206523,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.282328141245992,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr3:20098030..20098070,+ | |||
}} |
Revision as of 01:58, 14 September 2013
Short description: | p@chr3:20098030..20098070, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:20098030..20098070, + |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.04e-13 | 3 |
striated muscle cell | 1.04e-13 | 3 |
cardiac muscle cell | 1.04e-13 | 3 |
cardiac muscle myoblast | 1.04e-13 | 3 |
muscle precursor cell | 2.54e-07 | 6 |
muscle cell | 2.54e-07 | 6 |
myoblast | 2.54e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung | 5.04e-34 | 14 |
respiratory tube | 5.04e-34 | 14 |
respiration organ | 5.04e-34 | 14 |
pair of lungs | 5.04e-34 | 14 |
lung primordium | 5.04e-34 | 14 |
lung bud | 5.04e-34 | 14 |
epithelial bud | 4.94e-28 | 17 |
thoracic cavity element | 4.94e-28 | 17 |
thoracic segment organ | 4.94e-28 | 17 |
thoracic cavity | 4.94e-28 | 17 |
thoracic segment of trunk | 4.94e-28 | 17 |
respiratory primordium | 4.94e-28 | 17 |
endoderm of foregut | 4.94e-28 | 17 |
epithelial fold | 7.84e-24 | 20 |
respiratory tract | 1.40e-11 | 41 |
respiratory system | 2.66e-11 | 42 |
trunk | 1.67e-08 | 90 |
subdivision of trunk | 4.17e-07 | 66 |
endo-epithelium | 8.76e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.