FFCP PHASE1:Mm9::chr9:96531044..96531064,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=142|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:96531044..96531064,-|id=chr9:96531044..96531064,-|ontology_enrichment_celltype=CL:0000791!3.78e-12!9;CL:0000789!3.78e-12!9;CL:0002420!3.78e-12!9;CL:0002419!3.78e-12!9;CL:0000790!3.78e-12!9;CL:0000624!3.22e-10!8;CL:0000084!9.87e-10!11;CL:0000827!9.87e-10!11;CL:0000893!1.16e-09!6;CL:0002489!1.16e-09!6;CL:0000898!1.16e-09!6;CL:0000809!1.16e-09!6;CL:0000810!1.16e-09!6;CL:0000895!1.16e-09!6;CL:0000808!1.16e-09!6;CL:0000894!1.16e-09!6;CL:0000806!1.16e-09!6;CL:0000807!1.16e-09!6;CL:0000805!1.16e-09!6;CL:0002425!1.16e-09!6;CL:0002436!1.16e-09!6;CL:0002427!1.16e-09!6;CL:0002428!1.16e-09!6;CL:0002429!1.16e-09!6;CL:0002433!1.16e-09!6;CL:0002431!1.16e-09!6;CL:0002432!1.16e-09!6;CL:0000988!1.82e-09!32;CL:0002032!1.82e-09!32;CL:0000037!1.82e-09!32;CL:0000566!1.82e-09!32;CL:0000837!1.82e-09!32;CL:0000838!7.94e-09!12;CL:0000542!4.63e-08!13;CL:0000051!4.63e-08!13|ontology_enrichment_celltype_v019_2=CL:0000624,2.62e-11,8;CL:0000815,8.99e-11,1;CL:0000792,8.99e-11,1;CL:0000355,1.54e-10,9;CL:0000791,4.00e-10,9;CL:0000789,4.00e-10,9;CL:0002420,4.00e-10,9;CL:0002419,4.00e-10,9;CL:0000790,4.00e-10,9;CL:0000084,2.14e-08,11;CL:0000827,2.14e-08,11;CL:0000838,9.57e-08,12;CL:0000893,2.94e-07,6;CL:0002489,2.94e-07,6;CL:0000898,2.94e-07,6;CL:0000809,2.94e-07,6;CL:0000810,2.94e-07,6;CL:0000895,2.94e-07,6;CL:0000808,2.94e-07,6;CL:0000894,2.94e-07,6;CL:0000806,2.94e-07,6;CL:0000807,2.94e-07,6;CL:0000805,2.94e-07,6;CL:0002425,2.94e-07,6;CL:0002436,2.94e-07,6;CL:0002427,2.94e-07,6;CL:0002428,2.94e-07,6;CL:0002429,2.94e-07,6;CL:0002433,2.94e-07,6;CL:0002431,2.94e-07,6;CL:0002432,2.94e-07,6;CL:0000542,3.41e-07,13;CL:0000051,3.41e-07,13|ontology_enrichment_disease=DOID:0060100!1.45e-08!3;DOID:4045!1.45e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.62e-30,3;DOID:4045,3.62e-30,3;DOID:0050686,1.79e-15,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.54e-10,9;UBERON:0002036,1.54e-10,9;UBERON:0002385,1.54e-10,9;UBERON:0000486,1.54e-10,9;UBERON:0007503,1.54e-10,9;UBERON:0001015,1.54e-10,9;UBERON:0002329,1.54e-10,9;UBERON:0003082,1.54e-10,9;UBERON:0003059,1.54e-10,9;UBERON:0007282,1.54e-10,9;UBERON:0004290,1.54e-10,9;UBERON:0009618,1.54e-10,9;UBERON:0000383,1.51e-09,10;UBERON:0007524,9.84e-09,11;UBERON:0003077,9.84e-09,11;UBERON:0007285,9.84e-09,11|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,1.80772652818207,0.985521055061667,1.87251621057595,0.171217968225505,0,1.36960583944965,0.174840804837995,0,0,0,0,0.137114433605739,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,12.9744805528441,10.9386948233332,10.470474879476,4.70585190424811,30.0540013381716,12.62326917881,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0.679913719975421,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:96531044..96531064,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=142 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:96531044..96531064,- | |||
|id=chr9:96531044..96531064,- | |||
|ontology_enrichment_celltype=CL:0000791!3.78e-12!9;CL:0000789!3.78e-12!9;CL:0002420!3.78e-12!9;CL:0002419!3.78e-12!9;CL:0000790!3.78e-12!9;CL:0000624!3.22e-10!8;CL:0000084!9.87e-10!11;CL:0000827!9.87e-10!11;CL:0000893!1.16e-09!6;CL:0002489!1.16e-09!6;CL:0000898!1.16e-09!6;CL:0000809!1.16e-09!6;CL:0000810!1.16e-09!6;CL:0000895!1.16e-09!6;CL:0000808!1.16e-09!6;CL:0000894!1.16e-09!6;CL:0000806!1.16e-09!6;CL:0000807!1.16e-09!6;CL:0000805!1.16e-09!6;CL:0002425!1.16e-09!6;CL:0002436!1.16e-09!6;CL:0002427!1.16e-09!6;CL:0002428!1.16e-09!6;CL:0002429!1.16e-09!6;CL:0002433!1.16e-09!6;CL:0002431!1.16e-09!6;CL:0002432!1.16e-09!6;CL:0000988!1.82e-09!32;CL:0002032!1.82e-09!32;CL:0000037!1.82e-09!32;CL:0000566!1.82e-09!32;CL:0000837!1.82e-09!32;CL:0000838!7.94e-09!12;CL:0000542!4.63e-08!13;CL:0000051!4.63e-08!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.62e-11,8;CL:0000815,8.99e-11,1;CL:0000792,8.99e-11,1;CL:0000355,1.54e-10,9;CL:0000791,4.00e-10,9;CL:0000789,4.00e-10,9;CL:0002420,4.00e-10,9;CL:0002419,4.00e-10,9;CL:0000790,4.00e-10,9;CL:0000084,2.14e-08,11;CL:0000827,2.14e-08,11;CL:0000838,9.57e-08,12;CL:0000893,2.94e-07,6;CL:0002489,2.94e-07,6;CL:0000898,2.94e-07,6;CL:0000809,2.94e-07,6;CL:0000810,2.94e-07,6;CL:0000895,2.94e-07,6;CL:0000808,2.94e-07,6;CL:0000894,2.94e-07,6;CL:0000806,2.94e-07,6;CL:0000807,2.94e-07,6;CL:0000805,2.94e-07,6;CL:0002425,2.94e-07,6;CL:0002436,2.94e-07,6;CL:0002427,2.94e-07,6;CL:0002428,2.94e-07,6;CL:0002429,2.94e-07,6;CL:0002433,2.94e-07,6;CL:0002431,2.94e-07,6;CL:0002432,2.94e-07,6;CL:0000542,3.41e-07,13;CL:0000051,3.41e-07,13 | |||
|ontology_enrichment_disease=DOID:0060100!1.45e-08!3;DOID:4045!1.45e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.62e-30,3;DOID:4045,3.62e-30,3;DOID:0050686,1.79e-15,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.54e-10,9;UBERON:0002036,1.54e-10,9;UBERON:0002385,1.54e-10,9;UBERON:0000486,1.54e-10,9;UBERON:0007503,1.54e-10,9;UBERON:0001015,1.54e-10,9;UBERON:0002329,1.54e-10,9;UBERON:0003082,1.54e-10,9;UBERON:0003059,1.54e-10,9;UBERON:0007282,1.54e-10,9;UBERON:0004290,1.54e-10,9;UBERON:0009618,1.54e-10,9;UBERON:0000383,1.51e-09,10;UBERON:0007524,9.84e-09,11;UBERON:0003077,9.84e-09,11;UBERON:0007285,9.84e-09,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,1.80772652818207,0.985521055061667,1.87251621057595,0.171217968225505,0,1.36960583944965,0.174840804837995,0,0,0,0,0.137114433605739,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,12.9744805528441,10.9386948233332,10.470474879476,4.70585190424811,30.0540013381716,12.62326917881,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0.679913719975421,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:96531044..96531064,- | |||
}} |
Revision as of 19:02, 14 September 2013
Short description: | p@chr9:96531044..96531064, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:96531044..96531064, - |
Coexpression cluster: | MCL_coexpression_mm9:142 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.54e-10 | 9 |
striated muscle tissue | 1.54e-10 | 9 |
muscle tissue | 1.54e-10 | 9 |
multilaminar epithelium | 1.54e-10 | 9 |
epithelial vesicle | 1.54e-10 | 9 |
musculature | 1.54e-10 | 9 |
somite | 1.54e-10 | 9 |
myotome | 1.54e-10 | 9 |
presomitic mesoderm | 1.54e-10 | 9 |
presumptive segmental plate | 1.54e-10 | 9 |
dermomyotome | 1.54e-10 | 9 |
trunk paraxial mesoderm | 1.54e-10 | 9 |
musculature of body | 1.51e-09 | 10 |
dense mesenchyme tissue | 9.84e-09 | 11 |
paraxial mesoderm | 9.84e-09 | 11 |
presumptive paraxial mesoderm | 9.84e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.62e-30 | 3 |
muscle cancer | 3.62e-30 | 3 |
organ system cancer | 1.79e-15 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.