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FFCP PHASE1:Mm9::chr2:90894276..90894289,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19182|HGNC=|MCL_coexpression_id=0|UniProt=A2AGN7|association_with_transcript=19bp_to_ENSMUST00000111441_5end|description=CAGE_peak_4_at_Psmc3_5end|id=chr2:90894276..90894289,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.65e-09!75;UBERON:0001016!4.65e-09!75;UBERON:0001017!5.26e-09!73;UBERON:0005743!5.26e-09!73;UBERON:0001049!1.50e-07!52;UBERON:0005068!1.50e-07!52;UBERON:0006241!1.50e-07!52;UBERON:0007135!1.50e-07!52;UBERON:0002619!2.10e-07!17;UBERON:0000955!4.05e-07!50;UBERON:0006238!4.05e-07!50;UBERON:0002021!4.80e-07!10;UBERON:0000411!4.80e-07!10;UBERON:0001950!4.80e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.34e-09,75;UBERON:0001017,3.82e-09,73;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0000073,1.18e-07,54;UBERON:0004121,1.49e-07,95;UBERON:0000924,1.49e-07,95;UBERON:0006601,1.49e-07,95;UBERON:0002346,2.22e-07,64;UBERON:0003075,2.22e-07,64;UBERON:0007284,2.22e-07,64;UBERON:0002021,2.36e-07,10;UBERON:0000411,2.36e-07,10;UBERON:0001950,2.36e-07,10;UBERON:0002619,3.05e-07,17;UBERON:0010371,3.81e-07,73;UBERON:0000955,7.54e-07,47;UBERON:0006238,7.54e-07,47|phase1_expression=2.88267924788629,1.74487703819681,0.454999239389536,0.30246421130683,0,0.503637815735669,0.934450562382103,0.387369970324729,2.25261955442667,2.34064526321993,0.34243593645101,0.398860794976682,0.684802919724823,0.262261207256992,0,1.41732687172878,2.09868563438444,0,0.274228867211478,0,24.8326407241124,1.09220046320974,0.522399578277871,0.95995453676044,0.91763712426868,0,0,1.07735616342945,0.190023419456374,0.252030129759931,2.21730510655305,2.54012269383853,1.84519436275371,0,0.288851619751275,0.831173226792462,0.408338712524738,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,3.65100772129174,2.83855407414641,16.8863011988747,0.782391344348039,1.96222640742402,10.5449367712546,12.2490836416799,2.37976916763116,2.87505128729943,0.335565212115473,1.45072428402269,0.336093799142464,3.34437266846731,3.43840127926508,3.09403255366465,1.41621522601718,0.528990979272033,1.90149421051854,3.04960078862219,1.77858959222228,0.899899717281399,0.988866362566974,0.7104801149461,1.79760066311043,1.92109152660777,0.725827286159344,1.08004750665353,0.420649922702764,1.99955689082663,2.65042249141936,0.979926393719632,0.766763768145891,1.83843757322004,1.10115880999389,2.17068474744819,2.4577045320999,0.659431438650969,1.37231465403614,0.52091337055676,2.79182999001381,0.56276261003168,1.68078072554491,2.65165726926301,1.28134512719193,1.4911955666024,2.12033341332915,1.058001841495,1.44932244350839,4.30211938490693,4.0798280022465,3.2382191498269,3.24888208723835,2.24013443548668,3.08977724289854,1.87473354835864,1.55871602761721,2.12003744706204,1.12674735821344,2.56652954828636,5.09610479413291,0,4.11332977921307,2.28023878927589,2.02209778005913,4.79572294820052,0,0,0.867426633830679,1.21786191324856,1.84492397804847,0.753613202763113,1.29347577849275,0.502666365318702,0.247194967734374,0.86759614151947,0,1.94120219936891,0.662524555381181,0.969750506270444,1.86391761218122,1.17112318804619,1.46612694769419,1.02182822083437,1.1981512450592,0.599902730993408,1.39777249780371,2.24685959107234,2.74500361691176,2.26177833803156,4.69325664519146,6.64860189058859,3.32460871295296,5.353961681236,0.712875546952214,1.36847667671102,0.505445516867349,1.05220927943237,2.21204753036596,1.83921683546778,1.62055916824814,1.35634336052144,1.2246569847239,0.768682321709099,1.40552586839593,1.55222022443409,1.72454394346274,2.08016688184601,1.40760899331159,2.41115305670332,1.94633074457919,1.39300866608867,0.61734640922383,1.59227413454795,0.702213187313235,1.54408744268829,0.852490498186778,2.07125772535502,0.938104239924385,1.08037236876609,1.65721314909647,1.57411385397923,0.771335564436891,0.930135779001631,0.804820204198858,1.5179494507732,2.13927804887525,1.31333971263276,0.648550476366846,0.730999937126662,1.09775057645525,0.939444931322602,7.78072809687271,1.74937841044784,0.330418782983798,0.264450566663544,1.49301775374664,0.464473343720877,0.515469845288373,0,0.444756087689741,0.190225626112559,0,1.15289268306808,0.251335208800269,0.994782360205754,0.779856348476481,0.898819408654221,0.432276099749388,1.39398891278057,0.948339504765408,1.71372768914593,1.1270773567308,0.814605311381257,1.55161989734101,1.40271639780637,1.3279672796094,1.62371162777562,1.09899109488962,2.09775178667061,0.592905254174298,0.667380422864376,0.982794975566015,1.57403478669398,1.01430060694251,0.964708639009667,0.763877555344259,1.15078454980324,1.45921704097532,1.64736847912849,1.43768206527355,1.48856379067401,4.68056509671841,2.77836765741823,3.04975602987251,2.8946611281802,0.184753190166605,1.32643988239339,0.325929952884052,1.86719594352707,0.938760993154008,0.670025029767263,0.238043640886014,0,0.9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|EntrezGene=19182
|HGNC=
|MCL_coexpression_id=0
|UniProt=A2AGN7
|association_with_transcript=19bp_to_ENSMUST00000111441_5end
|description=CAGE_peak_4_at_Psmc3_5end
|id=chr2:90894276..90894289,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.65e-09!75;UBERON:0001016!4.65e-09!75;UBERON:0001017!5.26e-09!73;UBERON:0005743!5.26e-09!73;UBERON:0001049!1.50e-07!52;UBERON:0005068!1.50e-07!52;UBERON:0006241!1.50e-07!52;UBERON:0007135!1.50e-07!52;UBERON:0002619!2.10e-07!17;UBERON:0000955!4.05e-07!50;UBERON:0006238!4.05e-07!50;UBERON:0002021!4.80e-07!10;UBERON:0000411!4.80e-07!10;UBERON:0001950!4.80e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.34e-09,75;UBERON:0001017,3.82e-09,73;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0000073,1.18e-07,54;UBERON:0004121,1.49e-07,95;UBERON:0000924,1.49e-07,95;UBERON:0006601,1.49e-07,95;UBERON:0002346,2.22e-07,64;UBERON:0003075,2.22e-07,64;UBERON:0007284,2.22e-07,64;UBERON:0002021,2.36e-07,10;UBERON:0000411,2.36e-07,10;UBERON:0001950,2.36e-07,10;UBERON:0002619,3.05e-07,17;UBERON:0010371,3.81e-07,73;UBERON:0000955,7.54e-07,47;UBERON:0006238,7.54e-07,47
|phase1_expression=2.88267924788629,1.74487703819681,0.454999239389536,0.30246421130683,0,0.503637815735669,0.934450562382103,0.387369970324729,2.25261955442667,2.34064526321993,0.34243593645101,0.398860794976682,0.684802919724823,0.262261207256992,0,1.41732687172878,2.09868563438444,0,0.274228867211478,0,24.8326407241124,1.09220046320974,0.522399578277871,0.95995453676044,0.91763712426868,0,0,1.07735616342945,0.190023419456374,0.252030129759931,2.21730510655305,2.54012269383853,1.84519436275371,0,0.288851619751275,0.831173226792462,0.408338712524738,0.837063261473815,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,3.65100772129174,2.83855407414641,16.8863011988747,0.782391344348039,1.96222640742402,10.5449367712546,12.2490836416799,2.37976916763116,2.87505128729943,0.335565212115473,1.45072428402269,0.336093799142464,3.34437266846731,3.43840127926508,3.09403255366465,1.41621522601718,0.528990979272033,1.90149421051854,3.04960078862219,1.77858959222228,0.899899717281399,0.988866362566974,0.7104801149461,1.79760066311043,1.92109152660777,0.725827286159344,1.08004750665353,0.420649922702764,1.99955689082663,2.65042249141936,0.979926393719632,0.766763768145891,1.83843757322004,1.10115880999389,2.17068474744819,2.4577045320999,0.659431438650969,1.37231465403614,0.52091337055676,2.79182999001381,0.56276261003168,1.68078072554491,2.65165726926301,1.28134512719193,1.4911955666024,2.12033341332915,1.058001841495,1.44932244350839,4.30211938490693,4.0798280022465,3.2382191498269,3.24888208723835,2.24013443548668,3.08977724289854,1.87473354835864,1.55871602761721,2.12003744706204,1.12674735821344,2.56652954828636,5.09610479413291,0,4.11332977921307,2.28023878927589,2.02209778005913,4.79572294820052,0,0,0.867426633830679,1.21786191324856,1.84492397804847,0.753613202763113,1.29347577849275,0.502666365318702,0.247194967734374,0.86759614151947,0,1.94120219936891,0.662524555381181,0.969750506270444,1.86391761218122,1.17112318804619,1.46612694769419,1.02182822083437,1.1981512450592,0.599902730993408,1.39777249780371,2.24685959107234,2.74500361691176,2.26177833803156,4.69325664519146,6.64860189058859,3.32460871295296,5.353961681236,0.712875546952214,1.36847667671102,0.505445516867349,1.05220927943237,2.21204753036596,1.83921683546778,1.62055916824814,1.35634336052144,1.2246569847239,0.768682321709099,1.40552586839593,1.55222022443409,1.72454394346274,2.08016688184601,1.40760899331159,2.41115305670332,1.94633074457919,1.39300866608867,0.61734640922383,1.59227413454795,0.702213187313235,1.54408744268829,0.852490498186778,2.07125772535502,0.938104239924385,1.08037236876609,1.65721314909647,1.57411385397923,0.771335564436891,0.930135779001631,0.804820204198858,1.5179494507732,2.13927804887525,1.31333971263276,0.648550476366846,0.730999937126662,1.09775057645525,0.939444931322602,7.78072809687271,1.74937841044784,0.330418782983798,0.264450566663544,1.49301775374664,0.464473343720877,0.515469845288373,0,0.444756087689741,0.190225626112559,0,1.15289268306808,0.251335208800269,0.994782360205754,0.779856348476481,0.898819408654221,0.432276099749388,1.39398891278057,0.948339504765408,1.71372768914593,1.1270773567308,0.814605311381257,1.55161989734101,1.40271639780637,1.3279672796094,1.62371162777562,1.09899109488962,2.09775178667061,0.592905254174298,0.667380422864376,0.982794975566015,1.57403478669398,1.01430060694251,0.964708639009667,0.763877555344259,1.15078454980324,1.45921704097532,1.64736847912849,1.43768206527355,1.48856379067401,4.68056509671841,2.77836765741823,3.04975602987251,2.8946611281802,0.184753190166605,1.32643988239339,0.325929952884052,1.86719594352707,0.938760993154008,0.670025029767263,0.238043640886014,0,0.945810864637146,1.10732344824387,0.797273843287435,0.983179888294428,0.345369963731791,0.433947175744535,1.50791283939272,0,0.983528546038072,0.275936746304732,2.40825884981688,4.10240903072711,0.327869890753351,2.52470927204373,1.57754109708128,1.95219372148319,0.430846795465598,1.19484398976276,1.11399337041197,0.849229592366497,1.61924280669958,2.92255857911312,1.18586333383957,3.85585579706168,0.283880170416537,1.24645922567079,0.325773918707152,0,1.32745138339963,2.42780636154981,3.02323556964751,1.88605079755898,1.47650946440386,0.307435147943927,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0,1.62054984628179,1.29358683782755,0.428674070063185,1.24138163549592,2.85390108163313,2.13913726782757,2.43571959291679,0.23467170806371,1.0591603543191,1.10264199027481,1.31909002353184,1.29171541356724,1.56813604813205,2.02932984805332,1.64140899745061,0.291480836629851,3.8939313422207,1.19609616558497,0,1.48155621895769,1.31857919903284,1.6403307326523,1.14389086603261,0.849892149969277,1.11961161858926,1.52019971184866,0.954670618015114,0.632671987162271,0.813277868507395,0.756037385752609,1.67270636811575,1.09181281873089,0.944050424693745,1.23980183588004,1.04702376793612,0.388844919875379,0,174.744810992099,1.49516546043979,2.15096037594227,1.16670713006429,1.80823752868824,1.68956125490778,0.58678619322877,2.604087696879,5.34782656571125,66.4356332271517,104.842922277863,1.26404448251271,1.21635129174099,0.924398614483445,1.55904987573354,0.358053391334963,0.993406773906324,1.32214994471966,1.03382669022204,1.21159739937777,0.990688486514998,1.71404514732629,1.07203668813728,0.962118416403295,0.701261413089414,0.453460767230423,1.10992976687032,4.30626511725483,3.69346156000973,0.965947970160952,1.31377732815827,0.183151624267265,0.643105137237198,1.50471631210609,4.51801474093653,6.90487854760765,5.15605962095457,6.53042092906013,4.7955776383945,3.0215755895588,10.1253375034771,3.15224842256954,3.62513927187364,3.62432218226274,1.45302286617847,0.798049746802062,2.56100408631201,1.45864030240976,3.14419743941973,1.2869045591501,1.77797382241292,1.85431551515005,0.320919209591815,1.01078884705519,1.2673964994512,1.13175804831646,1.12369808963859,1.85672941974121,1.55075766180156,1.90517476513229,2.20180219295225,1.35036454324594,0.824171801606613,2.20798380201596,2.05721551431249,1.59728225543404,0.715308569841963,1.0174249164263,2.07040636913727,1.18460451048347,2.0122077016005,2.63069711437843,2.17286582153379,2.24456908663095,0.830445126869219,1.0835493061312,1.22769312950907,1.54936841185966,1.54325288784913,0.249810577937946,1.16965804222704,1.07435527024149,1.53030665655075,1.32354851471709,1.15933917810211
|short_description=p4@Psmc3
}}

Revision as of 00:50, 14 September 2013

Short description:p4@Psmc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Psmc3_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 19bp_to_ENSMUST00000111441_5end
EntrezGene:Psmc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Psmc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5174.74
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D95.35
testis, neonate N20.CNhs11110.839-18H366.44
testis, neonate N30.CNhs11130.1391-42E2104.84
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system3.34e-0975
central nervous system3.82e-0973
neural tube1.09e-0752
neural rod1.09e-0752
future spinal cord1.09e-0752
neural keel1.09e-0752
regional part of nervous system1.18e-0754
ectoderm-derived structure1.49e-0795
ectoderm1.49e-0795
presumptive ectoderm1.49e-0795
neurectoderm2.22e-0764
neural plate2.22e-0764
presumptive neural plate2.22e-0764
occipital lobe2.36e-0710
visual cortex2.36e-0710
neocortex2.36e-0710
regional part of cerebral cortex3.05e-0717
ecto-epithelium3.81e-0773
brain7.54e-0747
future brain7.54e-0747







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