FFCP PHASE1:Mm9::chrX:133365756..133365765,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18823|HGNC=|MCL_coexpression_id=212|UniProt=|association_with_transcript=55bp_to_ENSMUST00000125644_5end|description=CAGE_peak_14_at_Plp1_5end|id=chrX:133365756..133365765,+|ontology_enrichment_celltype=CL:0002610!5.12e-09!3|ontology_enrichment_celltype_v019_2=CL:0002610,4.26e-26,3;CL:0002614,1.09e-12,3;CL:0000117,1.71e-09,23;CL:0000337,1.71e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.84e-25!75;UBERON:0001016!1.84e-25!75;UBERON:0001017!1.25e-22!73;UBERON:0005743!1.25e-22!73;UBERON:0000955!5.27e-21!50;UBERON:0006238!5.27e-21!50;UBERON:0001049!9.10e-20!52;UBERON:0005068!9.10e-20!52;UBERON:0006241!9.10e-20!52;UBERON:0007135!9.10e-20!52;UBERON:0002616!1.79e-19!49;UBERON:0004121!2.01e-18!102;UBERON:0000924!2.01e-18!102;UBERON:0006601!2.01e-18!102;UBERON:0000033!3.28e-17!63;UBERON:0002346!1.69e-14!71;UBERON:0003075!1.69e-14!71;UBERON:0007284!1.69e-14!71;UBERON:0002020!4.58e-14!34;UBERON:0002021!1.96e-12!10;UBERON:0000411!1.96e-12!10;UBERON:0001950!1.96e-12!10;UBERON:0007811!2.44e-12!86;UBERON:0003080!1.31e-11!40;UBERON:0002298!2.41e-11!6;UBERON:0000153!7.98e-11!94;UBERON:0002791!9.64e-11!29;UBERON:0003528!9.64e-11!29;UBERON:0001893!9.64e-11!29;UBERON:0002780!2.45e-10!39;UBERON:0001890!2.45e-10!39;UBERON:0006240!2.45e-10!39;UBERON:0003056!3.59e-10!49;UBERON:0003076!7.42e-10!12;UBERON:0003057!7.42e-10!12;UBERON:0004684!5.12e-09!3;UBERON:0002275!5.12e-09!3;UBERON:0002619!9.40e-09!17;UBERON:0000956!1.67e-08!21;UBERON:0001869!1.67e-08!21;UBERON:0000203!1.67e-08!21;UBERON:0002240!5.10e-07!6;UBERON:0005174!5.10e-07!6;UBERON:0001137!5.10e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.26e-26,3;UBERON:0002275,4.26e-26,3;UBERON:0000073,9.72e-13,54;UBERON:0002038,1.09e-12,3;UBERON:0009663,1.09e-12,3;UBERON:0009661,1.09e-12,3;UBERON:0000125,1.09e-12,3;UBERON:0002308,1.09e-12,3;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002950,9.37e-10,4;UBERON:0001891,9.37e-10,4;UBERON:0009616,9.37e-10,4;UBERON:0010286,9.37e-10,4;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0001049,3.99e-08,52;UBERON:0005068,3.99e-08,52;UBERON:0006241,3.99e-08,52;UBERON:0007135,3.99e-08,52;UBERON:0002616,7.31e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.441737081903227,0,0,0,1.10115880999389,1.27687338085188,1.0752457327937,0,0,0,1.11673199600552,0,2.44477196442896,0,0.142371680799103,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,0,0,0,0,0,0.449371918214468,0.915001205637253,0,0.173824320192276,0,0.41557608911912,2.27137768294861,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,3.8679856575427,0,0,0,0,0,0,0,0.283076530788832,0,0.584511715822624,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.76195141904306,0.572895513439397,0.68741272937475,1.37016503954128,0,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p14@Plp1}} | ||
|EntrezGene=18823 | |||
|HGNC= | |||
|MCL_coexpression_id=212 | |||
|UniProt= | |||
|association_with_transcript=55bp_to_ENSMUST00000125644_5end | |||
|description=CAGE_peak_14_at_Plp1_5end | |||
|id=chrX:133365756..133365765,+ | |||
|ontology_enrichment_celltype=CL:0002610!5.12e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.26e-26,3;CL:0002614,1.09e-12,3;CL:0000117,1.71e-09,23;CL:0000337,1.71e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.84e-25!75;UBERON:0001016!1.84e-25!75;UBERON:0001017!1.25e-22!73;UBERON:0005743!1.25e-22!73;UBERON:0000955!5.27e-21!50;UBERON:0006238!5.27e-21!50;UBERON:0001049!9.10e-20!52;UBERON:0005068!9.10e-20!52;UBERON:0006241!9.10e-20!52;UBERON:0007135!9.10e-20!52;UBERON:0002616!1.79e-19!49;UBERON:0004121!2.01e-18!102;UBERON:0000924!2.01e-18!102;UBERON:0006601!2.01e-18!102;UBERON:0000033!3.28e-17!63;UBERON:0002346!1.69e-14!71;UBERON:0003075!1.69e-14!71;UBERON:0007284!1.69e-14!71;UBERON:0002020!4.58e-14!34;UBERON:0002021!1.96e-12!10;UBERON:0000411!1.96e-12!10;UBERON:0001950!1.96e-12!10;UBERON:0007811!2.44e-12!86;UBERON:0003080!1.31e-11!40;UBERON:0002298!2.41e-11!6;UBERON:0000153!7.98e-11!94;UBERON:0002791!9.64e-11!29;UBERON:0003528!9.64e-11!29;UBERON:0001893!9.64e-11!29;UBERON:0002780!2.45e-10!39;UBERON:0001890!2.45e-10!39;UBERON:0006240!2.45e-10!39;UBERON:0003056!3.59e-10!49;UBERON:0003076!7.42e-10!12;UBERON:0003057!7.42e-10!12;UBERON:0004684!5.12e-09!3;UBERON:0002275!5.12e-09!3;UBERON:0002619!9.40e-09!17;UBERON:0000956!1.67e-08!21;UBERON:0001869!1.67e-08!21;UBERON:0000203!1.67e-08!21;UBERON:0002240!5.10e-07!6;UBERON:0005174!5.10e-07!6;UBERON:0001137!5.10e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.26e-26,3;UBERON:0002275,4.26e-26,3;UBERON:0000073,9.72e-13,54;UBERON:0002038,1.09e-12,3;UBERON:0009663,1.09e-12,3;UBERON:0009661,1.09e-12,3;UBERON:0000125,1.09e-12,3;UBERON:0002308,1.09e-12,3;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002950,9.37e-10,4;UBERON:0001891,9.37e-10,4;UBERON:0009616,9.37e-10,4;UBERON:0010286,9.37e-10,4;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0001049,3.99e-08,52;UBERON:0005068,3.99e-08,52;UBERON:0006241,3.99e-08,52;UBERON:0007135,3.99e-08,52;UBERON:0002616,7.31e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.441737081903227,0,0,0,1.10115880999389,1.27687338085188,1.0752457327937,0,0,0,1.11673199600552,0,2.44477196442896,0,0.142371680799103,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,0,0,0,0,0,0.449371918214468,0.915001205637253,0,0.173824320192276,0,0.41557608911912,2.27137768294861,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,3.8679856575427,0,0,0,0,0,0,0,0.283076530788832,0,0.584511715822624,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.76195141904306,0.572895513439397,0.68741272937475,1.37016503954128,0,0.675022500231806,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@Plp1 | |||
}} |
Revision as of 19:20, 14 September 2013
Short description: | p14@Plp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Plp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | 55bp_to_ENSMUST00000125644_5end |
EntrezGene: | Plp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.26e-26 | 3 |
neuron of the substantia nigra | 1.09e-12 | 3 |
CNS neuron (sensu Vertebrata) | 1.71e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.71e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.26e-26 | 3 |
reticular formation | 4.26e-26 | 3 |
regional part of nervous system | 9.72e-13 | 54 |
substantia nigra | 1.09e-12 | 3 |
telencephalic nucleus | 1.09e-12 | 3 |
midbrain nucleus | 1.09e-12 | 3 |
neural nucleus | 1.09e-12 | 3 |
nucleus of brain | 1.09e-12 | 3 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
regional part of midbrain | 9.37e-10 | 4 |
midbrain | 9.37e-10 | 4 |
presumptive midbrain | 9.37e-10 | 4 |
midbrain neural tube | 9.37e-10 | 4 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
neural tube | 3.99e-08 | 52 |
neural rod | 3.99e-08 | 52 |
future spinal cord | 3.99e-08 | 52 |
neural keel | 3.99e-08 | 52 |
regional part of brain | 7.31e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.