Personal tools

FFCP PHASE1:Mm9::chr18:61204924..61204935,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=18596|HGNC=|MCL_coexpression_id=52|UniProt=E9QN12|association_with_transcript=70bp_to_ENSMUST00000115274_5end|description=CAGE_peak_3_at_Pdgfrb_5end|id=chr18:61204924..61204935,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,3.08e-09,7;CL:0000680,2.09e-08,6;CL:0000187,2.09e-08,6;CL:0000056,2.09e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!4.66e-08!14;UBERON:0000117!4.66e-08!14;UBERON:0000171!4.66e-08!14;UBERON:0000170!4.66e-08!14;UBERON:0005597!4.66e-08!14;UBERON:0000118!4.66e-08!14;UBERON:0004535!3.37e-07!23;UBERON:0001009!3.37e-07!23;UBERON:0004872!6.38e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.71e-10,14;UBERON:0000117,6.71e-10,14;UBERON:0000171,6.71e-10,14;UBERON:0000170,6.71e-10,14;UBERON:0005597,6.71e-10,14;UBERON:0000118,6.71e-10,14;UBERON:0004535,2.70e-08,23;UBERON:0001009,2.70e-08,23;UBERON:0005153,1.37e-07,17;UBERON:0005178,1.37e-07,17;UBERON:0005181,1.37e-07,17;UBERON:0002224,1.37e-07,17;UBERON:0000915,1.37e-07,17;UBERON:0008947,1.37e-07,17;UBERON:0003258,1.37e-07,17;UBERON:0004872,4.97e-07,33|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0.397163804803541,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,2.33166941804883,3.30384153891027,3.12956537739216,1.74420125104357,1.75748946187577,2.52758868796568,1.95980990275508,0,0,0,0,12.0911934936895,9.45560351797897,5.67239301505187,0,0,0.633831403506179,1.69422266034566,0,3.1496490104849,1.97773272513395,4.2628806896766,1.49800055259202,0.384218305321555,0.103689612308478,0.270011876663381,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0.919218786610021,0,0,0,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.30559649555362,0.589257170947335,0.142371680799103,0,0.454357159999104,1.058001841495,1.73918693221007,0.860423876981386,0,0,0,0,0.561777680527007,4.60161870960756,3.63700406444016,4.24007489412408,0.422530259330042,10.2661181931454,7.64415719119937,28.4426681261332,0,0,0,0.22836775943812,0.517875767294343,0.29688427812965,0.520455980298408,0.608930956624282,1.15307748628029,0.452167921657868,0.352766121407114,0.753999547978053,0.247194967734374,1.01219549843938,2.65383165584962,1.61766849947409,2.42925670306433,1.93950101254089,0,0.292780797011547,0.41889341362691,0.255457055208591,0.239630249011841,0,0.381210681219194,0.748953197024114,0.915001205637253,0.502617408451458,0.173824320192276,0,0,0.648965052271031,0.916554274652847,3.11017426525233,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.612328492361951,0.12811372028485,0.187403449119458,0.517406741478031,0.646703978798527,0.567318240503458,0.351902248327898,0,0.834141747676794,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0,0,0.720248245844059,0.710234206755631,0.787056926989615,0.617068451549513,0.930135779001631,0.536546802799238,1.75148013550754,1.15191894939436,1.47750717671186,1.94565142910054,1.90059983652932,1.09775057645525,2.01309628140558,0.210289948564127,0.720332286654991,0,0.264450566663544,1.06644125267617,1.16118335930219,0.515469845288373,0.605050573870028,0.889512175379481,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.779856348476481,0,0.216138049874694,0.199141273254367,0.758671603812327,0.685491075658373,0,1.62921062276251,1.16371492300575,0.771494018793504,1.07502113111237,1.32849133181642,0.627994911365499,0.987177311374404,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,1.24815069245824,0.252578877947112,0.358794827043824,0.964887042726734,2.95605104266567,0.757965647081939,0.814824882210129,2.71592137240301,1.40814148973101,0.670025029767263,1.6663054862021,6.43941037930736,3.94087860265477,5.09368786192182,7.01600982092943,3.76885623846197,3.62638461918381,3.90552458170081,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.468846746368813,1.47541450839008,2.01976741763498,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0,0.321321316421807,0.567760340833074,0.890328018336276,0.81443479676788,0.494910368917606,0,0.728341908464944,0,0.754420319023592,0.885905678642318,0.922305443831782,0.775284879504663,0,0.356497378384721,0.632073515871632,0,1.03135543248187,0.680879211507576,0.540183282093931,0.517434735131018,0.428674070063185,0.354680467284547,0.356737635204141,1.15184314421485,1.2178597964584,1.17335854031855,0.42366414172764,0,0.32977250588296,0.807322133479528,0.180938774784468,0,0.328281799490123,0.582961673259701,0.556275906031529,0.512612642393558,1.03193433981611,0.555583582109135,0.188368457004691,0.27338845544205,0,0,0,0.138199973804424,1.90934123603023,0,0.203319467126849,0.540026704109006,0,0.436725127492355,0.269728692769641,0.743881101528023,0.26175594198403,0.388844919875379,0,0,0.897099276263873,1.65458490457098,0.972255941720238,0.516639293910924,0.675824501963113,0.58678619322877,0.39061315453185,0.419437377702843,0.483168241652012,0,0,1.21635129174099,1.02710957164827,0.77952493786677,0.716106782669926,0,0.240390899039938,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,1.50145980360946,0.183151624267265,1.50057865355346,0,0,0.460325236507177,0,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,0,0,0.51776031175182,0.207574695168353,0,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0.222246727801615,1.23621034343337,0.320919209591815,0.758091635291392,0,1.13175804831646,0.280924522409647,0.576226371643824,0.746661096422973,0,1.27472758539341,1.54327376370964,0.412085900803307,0.588795680537589,0,0.354951612318675,0.238436189947321,0.290692833264657,0.564656282491984,0.592302255241736,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,1.06771516311757,1.18205378850676,0.409231043169689,0.619747364743864,0.578719832943424,1.24905288968973,1.63752125911786,1.71896843238639,1.3390183244819,2.20591419119516,0.695603506861264|short_description=p3@Pdgfrb}}
|EntrezGene=18596
|HGNC=
|MCL_coexpression_id=52
|UniProt=E9QN12
|association_with_transcript=70bp_to_ENSMUST00000115274_5end
|description=CAGE_peak_3_at_Pdgfrb_5end
|id=chr18:61204924..61204935,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000222,3.08e-09,7;CL:0000680,2.09e-08,6;CL:0000187,2.09e-08,6;CL:0000056,2.09e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!4.66e-08!14;UBERON:0000117!4.66e-08!14;UBERON:0000171!4.66e-08!14;UBERON:0000170!4.66e-08!14;UBERON:0005597!4.66e-08!14;UBERON:0000118!4.66e-08!14;UBERON:0004535!3.37e-07!23;UBERON:0001009!3.37e-07!23;UBERON:0004872!6.38e-07!33
|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.71e-10,14;UBERON:0000117,6.71e-10,14;UBERON:0000171,6.71e-10,14;UBERON:0000170,6.71e-10,14;UBERON:0005597,6.71e-10,14;UBERON:0000118,6.71e-10,14;UBERON:0004535,2.70e-08,23;UBERON:0001009,2.70e-08,23;UBERON:0005153,1.37e-07,17;UBERON:0005178,1.37e-07,17;UBERON:0005181,1.37e-07,17;UBERON:0002224,1.37e-07,17;UBERON:0000915,1.37e-07,17;UBERON:0008947,1.37e-07,17;UBERON:0003258,1.37e-07,17;UBERON:0004872,4.97e-07,33
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0.397163804803541,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,2.33166941804883,3.30384153891027,3.12956537739216,1.74420125104357,1.75748946187577,2.52758868796568,1.95980990275508,0,0,0,0,12.0911934936895,9.45560351797897,5.67239301505187,0,0,0.633831403506179,1.69422266034566,0,3.1496490104849,1.97773272513395,4.2628806896766,1.49800055259202,0.384218305321555,0.103689612308478,0.270011876663381,0,0.571301968807607,0.441737081903227,0,0.0958454710182364,0.919218786610021,0,0,0,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.30559649555362,0.589257170947335,0.142371680799103,0,0.454357159999104,1.058001841495,1.73918693221007,0.860423876981386,0,0,0,0,0.561777680527007,4.60161870960756,3.63700406444016,4.24007489412408,0.422530259330042,10.2661181931454,7.64415719119937,28.4426681261332,0,0,0,0.22836775943812,0.517875767294343,0.29688427812965,0.520455980298408,0.608930956624282,1.15307748628029,0.452167921657868,0.352766121407114,0.753999547978053,0.247194967734374,1.01219549843938,2.65383165584962,1.61766849947409,2.42925670306433,1.93950101254089,0,0.292780797011547,0.41889341362691,0.255457055208591,0.239630249011841,0,0.381210681219194,0.748953197024114,0.915001205637253,0.502617408451458,0.173824320192276,0,0,0.648965052271031,0.916554274652847,3.11017426525233,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.612328492361951,0.12811372028485,0.187403449119458,0.517406741478031,0.646703978798527,0.567318240503458,0.351902248327898,0,0.834141747676794,0.348252166522167,1.02891068203972,0.398068533636986,0,0,0,0,0,0.720248245844059,0.710234206755631,0.787056926989615,0.617068451549513,0.930135779001631,0.536546802799238,1.75148013550754,1.15191894939436,1.47750717671186,1.94565142910054,1.90059983652932,1.09775057645525,2.01309628140558,0.210289948564127,0.720332286654991,0,0.264450566663544,1.06644125267617,1.16118335930219,0.515469845288373,0.605050573870028,0.889512175379481,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.779856348476481,0,0.216138049874694,0.199141273254367,0.758671603812327,0.685491075658373,0,1.62921062276251,1.16371492300575,0.771494018793504,1.07502113111237,1.32849133181642,0.627994911365499,0.987177311374404,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0.162135226775035,0.549122826376163,0,0.372140947668503,1.24815069245824,0.252578877947112,0.358794827043824,0.964887042726734,2.95605104266567,0.757965647081939,0.814824882210129,2.71592137240301,1.40814148973101,0.670025029767263,1.6663054862021,6.43941037930736,3.94087860265477,5.09368786192182,7.01600982092943,3.76885623846197,3.62638461918381,3.90552458170081,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.468846746368813,1.47541450839008,2.01976741763498,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0,0.321321316421807,0.567760340833074,0.890328018336276,0.81443479676788,0.494910368917606,0,0.728341908464944,0,0.754420319023592,0.885905678642318,0.922305443831782,0.775284879504663,0,0.356497378384721,0.632073515871632,0,1.03135543248187,0.680879211507576,0.540183282093931,0.517434735131018,0.428674070063185,0.354680467284547,0.356737635204141,1.15184314421485,1.2178597964584,1.17335854031855,0.42366414172764,0,0.32977250588296,0.807322133479528,0.180938774784468,0,0.328281799490123,0.582961673259701,0.556275906031529,0.512612642393558,1.03193433981611,0.555583582109135,0.188368457004691,0.27338845544205,0,0,0,0.138199973804424,1.90934123603023,0,0.203319467126849,0.540026704109006,0,0.436725127492355,0.269728692769641,0.743881101528023,0.26175594198403,0.388844919875379,0,0,0.897099276263873,1.65458490457098,0.972255941720238,0.516639293910924,0.675824501963113,0.58678619322877,0.39061315453185,0.419437377702843,0.483168241652012,0,0,1.21635129174099,1.02710957164827,0.77952493786677,0.716106782669926,0,0.240390899039938,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,1.50145980360946,0.183151624267265,1.50057865355346,0,0,0.460325236507177,0,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,0,0,0.51776031175182,0.207574695168353,0,0.341467211508268,0.243106717068294,0.419226325255965,0.551530525350042,0.222246727801615,1.23621034343337,0.320919209591815,0.758091635291392,0,1.13175804831646,0.280924522409647,0.576226371643824,0.746661096422973,0,1.27472758539341,1.54327376370964,0.412085900803307,0.588795680537589,0,0.354951612318675,0.238436189947321,0.290692833264657,0.564656282491984,0.592302255241736,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,1.06771516311757,1.18205378850676,0.409231043169689,0.619747364743864,0.578719832943424,1.24905288968973,1.63752125911786,1.71896843238639,1.3390183244819,2.20591419119516,0.695603506861264
|short_description=p3@Pdgfrb
}}

Revision as of 16:29, 13 September 2013

Short description:p3@Pdgfrb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pdgfrb_5end
Coexpression cluster:MCL_coexpression_mm9:52
Association with transcript: 70bp_to_ENSMUST00000115274_5end
EntrezGene:Pdgfrb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pdgfrb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E67.02
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mesodermal cell3.08e-097
muscle precursor cell2.09e-086
muscle cell2.09e-086
myoblast2.09e-086

Uber anatomy
Ontology termp-valuen
lung6.71e-1014
respiratory tube6.71e-1014
respiration organ6.71e-1014
pair of lungs6.71e-1014
lung primordium6.71e-1014
lung bud6.71e-1014
cardiovascular system2.70e-0823
circulatory system2.70e-0823
epithelial bud1.37e-0717
thoracic cavity element1.37e-0717
thoracic segment organ1.37e-0717
thoracic cavity1.37e-0717
thoracic segment of trunk1.37e-0717
respiratory primordium1.37e-0717
endoderm of foregut1.37e-0717
splanchnic layer of lateral plate mesoderm4.97e-0733







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:61204924..61204935,%2B&oldid=2952935"