FFCP PHASE1:Mm9::chr14:32019968..32020001,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=64652|HGNC=|MCL_coexpression_id=240|UniProt=Q80TM9|association_with_transcript=0bp_to_ENSMUST00000022469_5end|description=CAGE_peak_2_at_Nisch_5end|id=chr14:32019968..32020001,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.54e-13!50;UBERON:0006238!1.54e-13!50;UBERON:0002616!1.69e-13!49;UBERON:0002791!5.52e-12!29;UBERON:0003528!5.52e-12!29;UBERON:0001893!5.52e-12!29;UBERON:0001049!9.68e-11!52;UBERON:0005068!9.68e-11!52;UBERON:0006241!9.68e-11!52;UBERON:0007135!9.68e-11!52;UBERON:0002020!6.74e-10!34;UBERON:0003080!1.39e-09!40;UBERON:0002780!3.99e-09!39;UBERON:0001890!3.99e-09!39;UBERON:0006240!3.99e-09!39;UBERON:0000956!8.03e-09!21;UBERON:0001869!8.03e-09!21;UBERON:0000203!8.03e-09!21;UBERON:0000033!1.43e-08!63;UBERON:0002619!4.50e-08!17;UBERON:0001017!1.88e-07!73;UBERON:0005743!1.88e-07!73;UBERON:0000073!2.18e-07!75;UBERON:0001016!2.18e-07!75;UBERON:0002021!7.61e-07!10;UBERON:0000411!7.61e-07!10;UBERON:0001950!7.61e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.51e-12,29;UBERON:0002791,5.51e-12,29;UBERON:0001893,5.51e-12,29;UBERON:0000073,6.17e-12,54;UBERON:0000955,9.29e-12,47;UBERON:0006238,9.29e-12,47;UBERON:0002616,1.03e-11,46;UBERON:0001049,9.67e-11,52;UBERON:0005068,9.67e-11,52;UBERON:0006241,9.67e-11,52;UBERON:0007135,9.67e-11,52;UBERON:0002020,6.73e-10,34;UBERON:0003080,1.39e-09,40;UBERON:0002780,3.98e-09,39;UBERON:0001890,3.98e-09,39;UBERON:0006240,3.98e-09,39;UBERON:0000956,8.02e-09,21;UBERON:0001869,8.02e-09,21;UBERON:0000203,8.02e-09,21;UBERON:0002619,4.50e-08,17;UBERON:0001017,1.84e-07,73;UBERON:0001016,2.13e-07,75;UBERON:0000160,2.47e-07,31;UBERON:0002021,7.61e-07,10;UBERON:0000411,7.61e-07,10;UBERON:0001950,7.61e-07,10|phase1_expression=2.7225304007815,40.1321718785265,41.4049307844478,58.9805212048319,58.6048004037226,27.1964420497261,23.3612640595526,4.9066862907799,0.985521055061667,0.936258105287974,0.34243593645101,0.717949430958028,6.33442700745461,7.16847299835779,7.32841475994458,6.88415909125408,6.29605690315332,4.10100814965709,3.29074640653773,4.2438965179803,13.6069264241712,1.19149141441062,0.783599367416806,11.1994695955385,10.782236210157,30.4342940980961,21.5380998079537,17.453169847557,12.1614988452079,20.6664706403143,6.65191531965914,5.08024538767705,6.76571266343027,0,19.3530585233354,13.4650062740379,15.7210404322024,14.2300754450549,14.0640362014284,18.8468547830567,28.8233429135197,29.3709558532132,22.8189865924642,6.04304726282771,5.87986201073184,4.22157529971868,14.0830441982647,7.41285531693518,10.3252505885202,13.026803237977,13.8586557409109,11.5002051491977,3.6912173332702,6.5282592781021,2.35265659399725,4.88792928468299,5.44413535883638,5.15672092277442,7.89034197352431,7.40587370980846,10.1413024560989,13.2149367506962,21.3430751066673,13.498495759221,17.7995945262055,17.7620028736525,13.1824048628098,12.6792040756113,10.2652716185393,12.0155285115205,11.3575479129746,8.56952953211411,5.52171352379034,16.9037302916637,12.0765293482978,11.0306254393203,30.8324466798288,49.9257491913084,45.3139273105918,17.2771036926554,14.6380229763855,15.106487746146,39.6439858581961,25.3243174514256,35.1435969886663,4.41942878210502,4.8406371471695,6.15118171223492,4.92220256665696,11.1090193356975,8.40607017234866,35.2773789562368,18.3592260101093,33.4615978815447,23.3919510281161,29.1217476613268,12.4995533917259,4.26075806445144,3.37721805983729,4.94675404314476,2.53518155598025,7.69958864485907,7.64415719119937,14.2213340630666,4.32982082022428,3.29367825117628,5.05524445014783,13.0169622879728,5.69663344023778,6.97678053604676,2.94925055502431,3.34912026143355,4.84292544237723,4.82312449768392,4.11560474974967,11.8126595849895,8.65182387070309,13.5923395504717,4.42305275974937,5.01477234836968,6.40440403535141,8.24287930329878,16.775258509631,30.7419836862124,35.8153868651008,17.6265368093928,0.958520996047362,2.39961092397363,2.1601938602421,27.7112682898922,24.2475319493872,12.062817802835,35.2863369990321,35.8001640262463,35.9473317088039,28.5544622999253,2.34230536855727,6.09594155989456,5.81262344397452,25.0425808504904,1.43132487258974,3.21862946206862,1.62055916824814,2.56198190320716,2.65342346690179,1.40925092313335,2.43624483855295,9.57202471734358,1.94011193639558,1.32374256117473,1.05570674498369,1.97276159184817,3.33656699070717,5.57203466435466,6.1734640922383,2.58744546864041,1.40442637462647,0.772043721344145,2.84163499395593,3.10688658803253,0.703578179943289,1.98068267607116,2.3674473558521,1.18058539048442,1.3884040159864,3.48800917125612,2.95100741539581,2.91913355917924,1.97471819896177,1.97000956894914,2.75633952455909,3.21639972335731,2.85415149878366,2.95254121272818,35.7492912559016,13.7892180588241,15.8601015832223,14.0158800331678,1.70630600428187,0.928946687441754,3.35055399437443,10.4875432804138,15.1217069814512,11.9842144450912,16.6085171540579,13.5053142873689,11.3100843960121,15.5186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| ||
|EntrezGene=64652 | |||
|HGNC= | |||
|MCL_coexpression_id=240 | |||
|UniProt=Q80TM9 | |||
|association_with_transcript=0bp_to_ENSMUST00000022469_5end | |||
|description=CAGE_peak_2_at_Nisch_5end | |||
|id=chr14:32019968..32020001,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.54e-13!50;UBERON:0006238!1.54e-13!50;UBERON:0002616!1.69e-13!49;UBERON:0002791!5.52e-12!29;UBERON:0003528!5.52e-12!29;UBERON:0001893!5.52e-12!29;UBERON:0001049!9.68e-11!52;UBERON:0005068!9.68e-11!52;UBERON:0006241!9.68e-11!52;UBERON:0007135!9.68e-11!52;UBERON:0002020!6.74e-10!34;UBERON:0003080!1.39e-09!40;UBERON:0002780!3.99e-09!39;UBERON:0001890!3.99e-09!39;UBERON:0006240!3.99e-09!39;UBERON:0000956!8.03e-09!21;UBERON:0001869!8.03e-09!21;UBERON:0000203!8.03e-09!21;UBERON:0000033!1.43e-08!63;UBERON:0002619!4.50e-08!17;UBERON:0001017!1.88e-07!73;UBERON:0005743!1.88e-07!73;UBERON:0000073!2.18e-07!75;UBERON:0001016!2.18e-07!75;UBERON:0002021!7.61e-07!10;UBERON:0000411!7.61e-07!10;UBERON:0001950!7.61e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,5.51e-12,29;UBERON:0002791,5.51e-12,29;UBERON:0001893,5.51e-12,29;UBERON:0000073,6.17e-12,54;UBERON:0000955,9.29e-12,47;UBERON:0006238,9.29e-12,47;UBERON:0002616,1.03e-11,46;UBERON:0001049,9.67e-11,52;UBERON:0005068,9.67e-11,52;UBERON:0006241,9.67e-11,52;UBERON:0007135,9.67e-11,52;UBERON:0002020,6.73e-10,34;UBERON:0003080,1.39e-09,40;UBERON:0002780,3.98e-09,39;UBERON:0001890,3.98e-09,39;UBERON:0006240,3.98e-09,39;UBERON:0000956,8.02e-09,21;UBERON:0001869,8.02e-09,21;UBERON:0000203,8.02e-09,21;UBERON:0002619,4.50e-08,17;UBERON:0001017,1.84e-07,73;UBERON:0001016,2.13e-07,75;UBERON:0000160,2.47e-07,31;UBERON:0002021,7.61e-07,10;UBERON:0000411,7.61e-07,10;UBERON:0001950,7.61e-07,10 | |||
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| |||
|short_description=p2@Nisch | |||
}} |
Revision as of 01:58, 13 September 2013
Short description: | p2@Nisch |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nisch_5end |
Coexpression cluster: | MCL_coexpression_mm9:240 |
Association with transcript: | 0bp_to_ENSMUST00000022469_5end |
EntrezGene: | Nisch |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain grey matter | 5.51e-12 | 29 |
regional part of telencephalon | 5.51e-12 | 29 |
telencephalon | 5.51e-12 | 29 |
regional part of nervous system | 6.17e-12 | 54 |
brain | 9.29e-12 | 47 |
future brain | 9.29e-12 | 47 |
regional part of brain | 1.03e-11 | 46 |
neural tube | 9.67e-11 | 52 |
neural rod | 9.67e-11 | 52 |
future spinal cord | 9.67e-11 | 52 |
neural keel | 9.67e-11 | 52 |
gray matter | 6.73e-10 | 34 |
anterior neural tube | 1.39e-09 | 40 |
regional part of forebrain | 3.98e-09 | 39 |
forebrain | 3.98e-09 | 39 |
future forebrain | 3.98e-09 | 39 |
cerebral cortex | 8.02e-09 | 21 |
cerebral hemisphere | 8.02e-09 | 21 |
pallium | 8.02e-09 | 21 |
regional part of cerebral cortex | 4.50e-08 | 17 |
central nervous system | 1.84e-07 | 73 |
nervous system | 2.13e-07 | 75 |
intestine | 2.47e-07 | 31 |
occipital lobe | 7.61e-07 | 10 |
visual cortex | 7.61e-07 | 10 |
neocortex | 7.61e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.