FFCP PHASE1:Mm9::chr17:84580956..84580994,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=165|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:84580956..84580994,+|id=chr17:84580956..84580994,+|ontology_enrichment_celltype=CL:0000988!3.62e-16!32;CL:0002032!3.62e-16!32;CL:0000037!3.62e-16!32;CL:0000566!3.62e-16!32;CL:0000837!3.62e-16!32;CL:0002031!2.32e-11!25;CL:0000049!4.11e-10!19;CL:0002320!6.90e-10!46;CL:0000134!6.90e-10!46;CL:0000738!5.84e-09!17;CL:0002087!5.84e-09!17;CL:0000838!5.10e-08!12;CL:0000219!6.18e-08!54;CL:0000763!2.29e-07!16;CL:0000542!3.42e-07!13;CL:0000051!3.42e-07!13;CL:0000084!4.91e-07!11;CL:0000827!4.91e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,2.19e-24,32;CL:0002032,2.19e-24,32;CL:0000037,2.19e-24,32;CL:0000837,2.19e-24,32;CL:0002320,6.11e-18,46;CL:0000134,6.11e-18,46;CL:0000049,7.40e-18,19;CL:0002031,1.42e-15,25;CL:0000219,9.78e-15,54;CL:0000034,4.84e-14,97;CL:0000763,2.00e-11,16;CL:0000723,6.33e-11,91;CL:0000048,6.33e-11,91;CL:0000738,3.10e-10,17;CL:0002087,3.10e-10,17;CL:0000553,6.55e-09,6;CL:0000556,6.55e-09,6;CL:0000838,1.56e-08,12;CL:0000839,2.54e-08,13;CL:0000542,7.82e-08,13;CL:0000051,7.82e-08,13;CL:0000557,4.41e-07,7;CL:0002476,4.94e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.74e-11,3;DOID:4045,5.74e-11,3|ontology_enrichment_uberon=UBERON:0002390!1.08e-17!45;UBERON:0003061!1.08e-17!45;UBERON:0002193!2.47e-17!48;UBERON:0002405!5.70e-12!70;UBERON:0002384!6.90e-10!46;UBERON:0004177!8.44e-10!29;UBERON:0002371!6.16e-09!16;UBERON:0001474!1.11e-08!22;UBERON:0004765!1.11e-08!22;UBERON:0001434!1.11e-08!22;UBERON:0002370!1.27e-08!23;UBERON:0000974!1.27e-08!23;UBERON:0004807!1.27e-08!23;UBERON:0005058!1.27e-08!23;UBERON:0003351!1.27e-08!23;UBERON:0009113!1.27e-08!23;UBERON:0003295!1.27e-08!23;UBERON:0009722!1.27e-08!23;UBERON:0005562!1.27e-08!23;UBERON:0007690!1.27e-08!23;UBERON:0006562!4.52e-08!24;UBERON:0003408!4.52e-08!24;UBERON:0001557!4.52e-08!24;UBERON:0001042!4.52e-08!24;UBERON:0008814!4.52e-08!24;UBERON:0009145!4.52e-08!24;UBERON:0002204!7.66e-08!32;UBERON:0003081!2.81e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.11e-18,46;UBERON:0002371,2.87e-14,16;UBERON:0002204,5.03e-12,32;UBERON:0001474,5.75e-10,22;UBERON:0004765,5.75e-10,22;UBERON:0001434,5.75e-10,22;UBERON:0002193,6.41e-07,48;UBERON:0002405,6.41e-07,48|phase1_expression=0,0,0,0,0,0,0,2.58246646883153,0.281577444303333,0,0,0.0797721589953364,2.22560948910567,2.18551006047494,0.333109761815663,1.61980213911861,0,3.78554598429885,5.75880621144103,5.94145512517242,0.17008658030214,1.58865521921416,0.522399578277871,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0.408338712524738,5.02237956884289,5.4693474116666,9.42342739152837,5.29408339227913,8.87959130445979,9.22469670759192,0,0,0,0,0,0,0,0.139986421625363,0,2.51673909086605,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,1.3498495759221,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0.304465478312141,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,1.7972268675888,3.59941638596045,2.03312363316904,0,0,0,0,0,0,0.324482526135515,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,2.1066395619397,1.80143534980301,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.518054945597687,0,3.01582567878545,1.63171705145613,0,0.551873492609465,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.915112692826091,2.20971958992012,4.05859211738608,3.04039942369732,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.410843828659309,0.129920822977795,0.537080087002444,0.39736270956253,0.360586348559907,0.295379054349154,0.504832249740738,0.762068066549998,0.100826185136841,0.38983152295901,0.673482891482306,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p@chr17:84580956..84580994,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=165 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:84580956..84580994,+ | |||
|id=chr17:84580956..84580994,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.62e-16!32;CL:0002032!3.62e-16!32;CL:0000037!3.62e-16!32;CL:0000566!3.62e-16!32;CL:0000837!3.62e-16!32;CL:0002031!2.32e-11!25;CL:0000049!4.11e-10!19;CL:0002320!6.90e-10!46;CL:0000134!6.90e-10!46;CL:0000738!5.84e-09!17;CL:0002087!5.84e-09!17;CL:0000838!5.10e-08!12;CL:0000219!6.18e-08!54;CL:0000763!2.29e-07!16;CL:0000542!3.42e-07!13;CL:0000051!3.42e-07!13;CL:0000084!4.91e-07!11;CL:0000827!4.91e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.19e-24,32;CL:0002032,2.19e-24,32;CL:0000037,2.19e-24,32;CL:0000837,2.19e-24,32;CL:0002320,6.11e-18,46;CL:0000134,6.11e-18,46;CL:0000049,7.40e-18,19;CL:0002031,1.42e-15,25;CL:0000219,9.78e-15,54;CL:0000034,4.84e-14,97;CL:0000763,2.00e-11,16;CL:0000723,6.33e-11,91;CL:0000048,6.33e-11,91;CL:0000738,3.10e-10,17;CL:0002087,3.10e-10,17;CL:0000553,6.55e-09,6;CL:0000556,6.55e-09,6;CL:0000838,1.56e-08,12;CL:0000839,2.54e-08,13;CL:0000542,7.82e-08,13;CL:0000051,7.82e-08,13;CL:0000557,4.41e-07,7;CL:0002476,4.94e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.74e-11,3;DOID:4045,5.74e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.08e-17!45;UBERON:0003061!1.08e-17!45;UBERON:0002193!2.47e-17!48;UBERON:0002405!5.70e-12!70;UBERON:0002384!6.90e-10!46;UBERON:0004177!8.44e-10!29;UBERON:0002371!6.16e-09!16;UBERON:0001474!1.11e-08!22;UBERON:0004765!1.11e-08!22;UBERON:0001434!1.11e-08!22;UBERON:0002370!1.27e-08!23;UBERON:0000974!1.27e-08!23;UBERON:0004807!1.27e-08!23;UBERON:0005058!1.27e-08!23;UBERON:0003351!1.27e-08!23;UBERON:0009113!1.27e-08!23;UBERON:0003295!1.27e-08!23;UBERON:0009722!1.27e-08!23;UBERON:0005562!1.27e-08!23;UBERON:0007690!1.27e-08!23;UBERON:0006562!4.52e-08!24;UBERON:0003408!4.52e-08!24;UBERON:0001557!4.52e-08!24;UBERON:0001042!4.52e-08!24;UBERON:0008814!4.52e-08!24;UBERON:0009145!4.52e-08!24;UBERON:0002204!7.66e-08!32;UBERON:0003081!2.81e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.11e-18,46;UBERON:0002371,2.87e-14,16;UBERON:0002204,5.03e-12,32;UBERON:0001474,5.75e-10,22;UBERON:0004765,5.75e-10,22;UBERON:0001434,5.75e-10,22;UBERON:0002193,6.41e-07,48;UBERON:0002405,6.41e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,2.58246646883153,0.281577444303333,0,0,0.0797721589953364,2.22560948910567,2.18551006047494,0.333109761815663,1.61980213911861,0,3.78554598429885,5.75880621144103,5.94145512517242,0.17008658030214,1.58865521921416,0.522399578277871,0,0,0,0,0,0,0,0.443461021310609,0,0,0,0,0,0.408338712524738,5.02237956884289,5.4693474116666,9.42342739152837,5.29408339227913,8.87959130445979,9.22469670759192,0,0,0,0,0,0,0,0.139986421625363,0,2.51673909086605,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,1.3498495759221,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,1.29468941823586,0,0,0.304465478312141,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,1.7972268675888,3.59941638596045,2.03312363316904,0,0,0,0,0,0,0.324482526135515,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,2.1066395619397,1.80143534980301,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0.518054945597687,0,3.01582567878545,1.63171705145613,0,0.551873492609465,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0.915112692826091,2.20971958992012,4.05859211738608,3.04039942369732,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.410843828659309,0.129920822977795,0.537080087002444,0.39736270956253,0.360586348559907,0.295379054349154,0.504832249740738,0.762068066549998,0.100826185136841,0.38983152295901,0.673482891482306,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chr17:84580956..84580994,+ | |||
}} |
Revision as of 15:28, 13 September 2013
Short description: | p@chr17:84580956..84580994, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:84580956..84580994, + |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.19e-24 | 32 |
hematopoietic oligopotent progenitor cell | 2.19e-24 | 32 |
hematopoietic stem cell | 2.19e-24 | 32 |
hematopoietic multipotent progenitor cell | 2.19e-24 | 32 |
connective tissue cell | 6.11e-18 | 46 |
mesenchymal cell | 6.11e-18 | 46 |
common myeloid progenitor | 7.40e-18 | 19 |
hematopoietic lineage restricted progenitor cell | 1.42e-15 | 25 |
motile cell | 9.78e-15 | 54 |
stem cell | 4.84e-14 | 97 |
myeloid cell | 2.00e-11 | 16 |
somatic stem cell | 6.33e-11 | 91 |
multi fate stem cell | 6.33e-11 | 91 |
leukocyte | 3.10e-10 | 17 |
nongranular leukocyte | 3.10e-10 | 17 |
megakaryocyte progenitor cell | 6.55e-09 | 6 |
megakaryocyte | 6.55e-09 | 6 |
lymphoid lineage restricted progenitor cell | 1.56e-08 | 12 |
myeloid lineage restricted progenitor cell | 2.54e-08 | 13 |
lymphocyte | 7.82e-08 | 13 |
common lymphoid progenitor | 7.82e-08 | 13 |
granulocyte monocyte progenitor cell | 4.41e-07 | 7 |
bone marrow macrophage | 4.94e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.11e-18 | 46 |
bone marrow | 2.87e-14 | 16 |
musculoskeletal system | 5.03e-12 | 32 |
bone element | 5.75e-10 | 22 |
skeletal element | 5.75e-10 | 22 |
skeletal system | 5.75e-10 | 22 |
hemolymphoid system | 6.41e-07 | 48 |
immune system | 6.41e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.74e-11 | 3 |
muscle cancer | 5.74e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.