Coexpression cluster:C3063: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|tfbs_overrepresentation=0.147255,0.0586687,0.039404,0.0477154,0.199763,0.0460856,0.0430074,0.101122,0.03272,0.0257057,0.139423,3.09603e-07,0.0190579,0.125978,0.148679,0.0619003,0.010441,0.00498785,0.0528514,0.108057,0.188635,0.132577,0.081977,0.00465244,0.0415721,0.0250931,0.0236364,0.00424558,0.143747,0.00450133,0.0226057,0.114046,0.0180314,0.208242,0.00226357,0.0844722,4.65251e-08,0.0429682,1.01701e-05,0.0667043,0.00481151,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,6.35457e-06,2.11807e-07,0.0783235,0.00577992,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.0709764,0.00183766,0.0860723,0.167053,0.0126543,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.000702541,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.00526876,0.000234347,0.064341,0.209032,4.12188e-10,0.062747,0.0857568,0.0495878,0.000155755,0.0473737,0.0853887,0.00688504,0.000303831,0.153631,0.000142889,0.0415725,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.00229559,0.0649715,0.00056041,4.51897e-08,5.86349e-05,0.0339971,0.0117862,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.0249033,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.0082662,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,4.57719e-05,0.0693171,0.0988228,0.00365114,0.0389418,0.120833,0.200647,0.143677,0.00113738,0.0265818,0.0427088,0.00719677,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.0413643,0.00027205,0.0400322,0.127369,0.0403542,0.312091,0.00111717,0.137725,3.26339e-07,0.0541353,0.0799324,0.090079,0.140334,0.0176328,0.178449,0.000642566,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.0178773,0.0401756,0.000101127,0.173562,0.107145,0.187297,0.122935,0.00240885,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.00624688,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.000337223,0.15185,0.206299,0.0010913,0.0458667,0.104357,0.121154,0.1129,0.00664287,0.0151713,0.164202,0.100942,0.00202722,0.00549554,0.14193,0.37245,3.01626e-05,0.161026,0.0738599,0.126611,1.84679e-05,0.085973,0.060453,0.059896,2.79199e-07,0.0859236,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,3.96282e-11,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.00647842,0.0119747,0.117027,0.159052,0.00122826,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.0121776,0.0619218,0.1751,3.65925e-05,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.00292601,0.278352,0.00204659,0.254773,8.51121e-10,0.00386209,0.0380459,0.130174,0.584917,0.355018,0.782949,0.268011,0.20128,0.252249,2.29016e-08,4.55982e-06,0.261644,0.261553,0.446302,0.0806291,0.053682,0.49143,0.0619618,0.0018019,0.329568,0.178727,0.0724671,0.271958,0.292154,0.0964816,0.00183273,0.217139,0.00244849,0.187251,0.362792,0.181715,0.0186051,0.109988,0.330894,0.218329,0.427027,0.0821552,0.129235,0.000107655,0.173877,0.168255,0.370782,0.415647,0.0297533,0.253571,0.276829,0.301787,0.481778,0.0565541,0.0270783,0.00574256,0.236436,0.283727,4.69813e-05,0.21363,0.000448164,0.120054,0.576651,0.102333,0.00535876,0.0280875,0.439556,0.373868,0.0116572,0.608919,0.18237,4.27123e-05,2.05465e-06,1.78174e-13,0.275351,0.236471,0.0184133,0.0684159,0.00117453,0.00415948,7.50812e-05,0.0340542,0.163222,0.522083,0.248634,0.281576,0.0271848,0.163244,0.0670502,0.0730934,0.184794,0.0138549,0.176034,0.0583074,0.0169683,0.305671,0.188159,0.00915612,3.68637e-05,0.218623,0.0550136,0.00743804,0.0451077,0.0747529,0.229003,0.0222308,0.00223439,0.0338328,0.0484563,0.0671437,5.958e-05,0.000431293,0.0605279,0.000194033,0.0428373,0.00692297,0.108847,0.0282539,0.336314,0.0209597,0.15631,0.00172609,0.421464,0.48267,0.420626,0.165111,1.62855e-07,0.335105,0.144809,0.145539,0.000152461,0.376191,0.447325,0.127215,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.18767,0.293698,0.0450006,0.343734,0.306556,0.000553055,0.06617,0.503082,0.522888,0.284629,0.262537,0.359455,0.0277799,0.016014,0.41707,0.363685,0.464871,0.00320894,0.0228979,0.171685,0.651524,0.00288466,0.269226,0.339277,0.00922147,0.0439467,0.141758,0.124432,0.000974263,0.159617,0.0310416,0.0799758,0.0293409,0.189515,0.0891382,0.0595618,0.524997,0.0178839,0.347298,0.539392,0.00966846,0.00431743,0.404569,0.0204872,0.0186811,0.0562865,0.00249247,0.0556835,0.192544,0.0779981,0.00168976,0.144322,0.0270501,0.203656,0.0216577,0.441735,0.0196924,0.00651205,0.28934,0.0435386,0.0515253,0.126478,0.134852,0.00592795,0.000335843,0.0627924,0.00151445,0.0179103,0.00605613,0.279795,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,5.0337e-06,0.193675,0.0684384,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,4.31765e-06,1.2255e-07,0.132201,0.00130383,0.0481795,0.0214786,0.016022,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.0043762,0.00481323,1.54642e-09,0.141119,0.211595,0.0300692,0.00905936,0.0445237,0.052362,0.0235128,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,2.5572e-05,0.00662343,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.00294748,0.161801,0.193215,0.0549034,0.0779715,0.00160873,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.00102636,3.45744e-08,0.0330727,0.00100273,0.00211059,0.0394698,0.0596469,0.00236266,0.122476,0.108872,0.11002,0.26144,0.0286025,2.02725e-05,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.00176415,0.237101,0.0458068,0.0761239,0.172491,0.0818785,0.182701,4.52528e-06,0.147698,0.141463,0.167267,0.140622,0.0889592,2.61649e-06,2.79364e-05,0.0473033,0.094881,0.022113,0.000434303,0.0774373,0.109194,0.00864322,0.00904548,0.00681584,3.14016e-06,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.0109165,0.0340203,0.0741807,0.0425274,1.19927e-05,0.0926491,0.21727,0.289306,0.00740669,0.192475,0.0168693,1.97467e-05,0.057571,0.047591,0.000170831,0.0608699,0.175319,0.0505407,0.00260609,0.0271723,0.291114,0.0355833,0.125606,0.175094,4.63445e-08,6.6291e-06,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,3.16955e-07,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.0158019,0.00571044,0.221645,0.057168,0.000171101,0.0759837,0.286863,0.152372,0.194941,0.000125914,0.00534625,0.00771936,0.172982,0.0661495,0.000654973,0.0626744,0.191335,2.45283e-05,1.97891e-15,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.0154015,0.193653,0.137219,0.228144,0.251466,0.288096,0.00738316,0.000104984,0.000795326,7.86956e-06,0.112651,0.0186145,0.174776,0.0948451,0.0384217,0.0339656,0.140533,0.0997756,0.0364628,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.0182671,0.0128995,0.0546539,0.0062542,0.0590944,0.000216551,0.00109188,0.218229,0.000161114,0.0020598,8.23293e-08,0.0360851,0.0998546,0.00899487,0.0434602,0.00935312,0.00233292,0.36927,0.449036,0.0973145,0.231447,0.544776,0.43956,0.37006,0.42622,0.00327292,0.197484,0.0919774,0.36145,0.00202987,0.00150864,0.580441,0.276075,0.432035,0.000369536,0.0886602,0.0049331,0.153829,0.443185,0.522904,0.0608227,9.87111e-13,0.227104,0.000113758,0.0734371,0.0135352,0.0450114,9.19242e-05,0.00143312,0.00228337,0.28907,0.164197,0.00379441,0.0461094,0.21103,0.138768,0.0642229,0.468444,0.258219,0.0031948,0.243383,4.14881e-06,0.390974,1.40974e-06,3.39054e-10,0.161598,0.013901,1.30828e-05,0.0323708,4.65435e-05,0.37357,8.87042e-08,0.477353,3.25586e-05,1.40958e-05,4.79604e-07,0.20342,0.0215953,0.20558,0.300504,0.25656,0.425963,0.349197,0.0131573,0.156104,0.141318,0.00217346,0.0961477,0.314438,0.00108466,0.163828,0.0289012,0.120226,0.0448825,0.562405,0.314429,0.181415,0.282286,0.0674279,0.616388,0.0978616,0.516511,0.322213,0.656109,0.0655189,0.000436901,0.387276,0.522605,0.481611,0.000151141,0.222037,0.416621,0.416292,0.0252635,1.06909e-05,3.41694e-05,0.204817,0.0233392,0.138871,2.79004e-06,0.0147755,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.0805711,0.170369,0.0980968,0.365487,0.178743,0.0889149,0.363192,0.236011,0.203486,0.273398,0.375787,0.4466,0.351067,0.275347,0.000640194,0.0524515,0.241132,0.371414,0.30666,0.303709,0.495883,0.386538,0.159081,0.250964,0.0851927,0.457886,0.156714,0.220231,0.509064,0.196976,0.191517,0.463751,0.0145214,0.307334,0.127092,0.283463,0.201728,0.135386,0.399569,0.273281,0.00128492,0.275089,0.384593,0.138622,0.0105648,0.0656472,0.197805,0.608187,0.0870376,0.0627969,0.173874,0.299887,0.634365,0.205413,0.0165618,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.0189519,0.0719199,0.264884,0.162568,0.0195357,0.163057,0.0260582,0.0233135,0.0900729,0.0953646,0.0146333,0.252184,0.378361,0.0358457,0.0232009,0.447185,0.0171537,0.193601,0.220904,0.222977,0.0664606,0.0542164,0.21801,0.198614,0.186804,0.123324,0.0213665,0.0325925,0.0933115,0.12405,0.179889,0.0279371,0.0430576,0.00376943,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.0701861,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.0132793,0.220319,0.0204324,0.00805527,0.0370716,0.30793,0.0173907,0.159884,0.0363723,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.0377094,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.246105,0.173026,0.200432,0.139785,0.197112,0.0315594,0.156465,0.00899301,0.036274,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.00467879,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.0377035,0.211332,0.018841,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.0457063,0.347036,0.141729,0.0381402,0.0359756,0.200105,0.227491,0.29837,0.0352561,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.325148,0.115817,0.000125371,0.0271615,0.11528,0.194982,0.0195259,0.000383954,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.056548,0.0156618,0.0133429,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.0130722,0.215705,0.252796,0.0228361,0.0750181 | |tfbs_overrepresentation=0.147255,0.0586687,0.039404,0.0477154,0.199763,0.0460856,0.0430074,0.101122,0.03272,0.0257057,0.139423,3.09603e-07,0.0190579,0.125978,0.148679,0.0619003,0.010441,0.00498785,0.0528514,0.108057,0.188635,0.132577,0.081977,0.00465244,0.0415721,0.0250931,0.0236364,0.00424558,0.143747,0.00450133,0.0226057,0.114046,0.0180314,0.208242,0.00226357,0.0844722,4.65251e-08,0.0429682,1.01701e-05,0.0667043,0.00481151,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,6.35457e-06,2.11807e-07,0.0783235,0.00577992,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.0709764,0.00183766,0.0860723,0.167053,0.0126543,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.000702541,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.00526876,0.000234347,0.064341,0.209032,4.12188e-10,0.062747,0.0857568,0.0495878,0.000155755,0.0473737,0.0853887,0.00688504,0.000303831,0.153631,0.000142889,0.0415725,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.00229559,0.0649715,0.00056041,4.51897e-08,5.86349e-05,0.0339971,0.0117862,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.0249033,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.0082662,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,4.57719e-05,0.0693171,0.0988228,0.00365114,0.0389418,0.120833,0.200647,0.143677,0.00113738,0.0265818,0.0427088,0.00719677,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.0413643,0.00027205,0.0400322,0.127369,0.0403542,0.312091,0.00111717,0.137725,3.26339e-07,0.0541353,0.0799324,0.090079,0.140334,0.0176328,0.178449,0.000642566,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.0178773,0.0401756,0.000101127,0.173562,0.107145,0.187297,0.122935,0.00240885,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.00624688,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.000337223,0.15185,0.206299,0.0010913,0.0458667,0.104357,0.121154,0.1129,0.00664287,0.0151713,0.164202,0.100942,0.00202722,0.00549554,0.14193,0.37245,3.01626e-05,0.161026,0.0738599,0.126611,1.84679e-05,0.085973,0.060453,0.059896,2.79199e-07,0.0859236,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,3.96282e-11,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.00647842,0.0119747,0.117027,0.159052,0.00122826,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.0121776,0.0619218,0.1751,3.65925e-05,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.00292601,0.278352,0.00204659,0.254773,8.51121e-10,0.00386209,0.0380459,0.130174,0.584917,0.355018,0.782949,0.268011,0.20128,0.252249,2.29016e-08,4.55982e-06,0.261644,0.261553,0.446302,0.0806291,0.053682,0.49143,0.0619618,0.0018019,0.329568,0.178727,0.0724671,0.271958,0.292154,0.0964816,0.00183273,0.217139,0.00244849,0.187251,0.362792,0.181715,0.0186051,0.109988,0.330894,0.218329,0.427027,0.0821552,0.129235,0.000107655,0.173877,0.168255,0.370782,0.415647,0.0297533,0.253571,0.276829,0.301787,0.481778,0.0565541,0.0270783,0.00574256,0.236436,0.283727,4.69813e-05,0.21363,0.000448164,0.120054,0.576651,0.102333,0.00535876,0.0280875,0.439556,0.373868,0.0116572,0.608919,0.18237,4.27123e-05,2.05465e-06,1.78174e-13,0.275351,0.236471,0.0184133,0.0684159,0.00117453,0.00415948,7.50812e-05,0.0340542,0.163222,0.522083,0.248634,0.281576,0.0271848,0.163244,0.0670502,0.0730934,0.184794,0.0138549,0.176034,0.0583074,0.0169683,0.305671,0.188159,0.00915612,3.68637e-05,0.218623,0.0550136,0.00743804,0.0451077,0.0747529,0.229003,0.0222308,0.00223439,0.0338328,0.0484563,0.0671437,5.958e-05,0.000431293,0.0605279,0.000194033,0.0428373,0.00692297,0.108847,0.0282539,0.336314,0.0209597,0.15631,0.00172609,0.421464,0.48267,0.420626,0.165111,1.62855e-07,0.335105,0.144809,0.145539,0.000152461,0.376191,0.447325,0.127215,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.18767,0.293698,0.0450006,0.343734,0.306556,0.000553055,0.06617,0.503082,0.522888,0.284629,0.262537,0.359455,0.0277799,0.016014,0.41707,0.363685,0.464871,0.00320894,0.0228979,0.171685,0.651524,0.00288466,0.269226,0.339277,0.00922147,0.0439467,0.141758,0.124432,0.000974263,0.159617,0.0310416,0.0799758,0.0293409,0.189515,0.0891382,0.0595618,0.524997,0.0178839,0.347298,0.539392,0.00966846,0.00431743,0.404569,0.0204872,0.0186811,0.0562865,0.00249247,0.0556835,0.192544,0.0779981,0.00168976,0.144322,0.0270501,0.203656,0.0216577,0.441735,0.0196924,0.00651205,0.28934,0.0435386,0.0515253,0.126478,0.134852,0.00592795,0.000335843,0.0627924,0.00151445,0.0179103,0.00605613,0.279795,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,5.0337e-06,0.193675,0.0684384,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,4.31765e-06,1.2255e-07,0.132201,0.00130383,0.0481795,0.0214786,0.016022,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.0043762,0.00481323,1.54642e-09,0.141119,0.211595,0.0300692,0.00905936,0.0445237,0.052362,0.0235128,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,2.5572e-05,0.00662343,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.00294748,0.161801,0.193215,0.0549034,0.0779715,0.00160873,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.00102636,3.45744e-08,0.0330727,0.00100273,0.00211059,0.0394698,0.0596469,0.00236266,0.122476,0.108872,0.11002,0.26144,0.0286025,2.02725e-05,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.00176415,0.237101,0.0458068,0.0761239,0.172491,0.0818785,0.182701,4.52528e-06,0.147698,0.141463,0.167267,0.140622,0.0889592,2.61649e-06,2.79364e-05,0.0473033,0.094881,0.022113,0.000434303,0.0774373,0.109194,0.00864322,0.00904548,0.00681584,3.14016e-06,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.0109165,0.0340203,0.0741807,0.0425274,1.19927e-05,0.0926491,0.21727,0.289306,0.00740669,0.192475,0.0168693,1.97467e-05,0.057571,0.047591,0.000170831,0.0608699,0.175319,0.0505407,0.00260609,0.0271723,0.291114,0.0355833,0.125606,0.175094,4.63445e-08,6.6291e-06,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,3.16955e-07,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.0158019,0.00571044,0.221645,0.057168,0.000171101,0.0759837,0.286863,0.152372,0.194941,0.000125914,0.00534625,0.00771936,0.172982,0.0661495,0.000654973,0.0626744,0.191335,2.45283e-05,1.97891e-15,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.0154015,0.193653,0.137219,0.228144,0.251466,0.288096,0.00738316,0.000104984,0.000795326,7.86956e-06,0.112651,0.0186145,0.174776,0.0948451,0.0384217,0.0339656,0.140533,0.0997756,0.0364628,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.0182671,0.0128995,0.0546539,0.0062542,0.0590944,0.000216551,0.00109188,0.218229,0.000161114,0.0020598,8.23293e-08,0.0360851,0.0998546,0.00899487,0.0434602,0.00935312,0.00233292,0.36927,0.449036,0.0973145,0.231447,0.544776,0.43956,0.37006,0.42622,0.00327292,0.197484,0.0919774,0.36145,0.00202987,0.00150864,0.580441,0.276075,0.432035,0.000369536,0.0886602,0.0049331,0.153829,0.443185,0.522904,0.0608227,9.87111e-13,0.227104,0.000113758,0.0734371,0.0135352,0.0450114,9.19242e-05,0.00143312,0.00228337,0.28907,0.164197,0.00379441,0.0461094,0.21103,0.138768,0.0642229,0.468444,0.258219,0.0031948,0.243383,4.14881e-06,0.390974,1.40974e-06,3.39054e-10,0.161598,0.013901,1.30828e-05,0.0323708,4.65435e-05,0.37357,8.87042e-08,0.477353,3.25586e-05,1.40958e-05,4.79604e-07,0.20342,0.0215953,0.20558,0.300504,0.25656,0.425963,0.349197,0.0131573,0.156104,0.141318,0.00217346,0.0961477,0.314438,0.00108466,0.163828,0.0289012,0.120226,0.0448825,0.562405,0.314429,0.181415,0.282286,0.0674279,0.616388,0.0978616,0.516511,0.322213,0.656109,0.0655189,0.000436901,0.387276,0.522605,0.481611,0.000151141,0.222037,0.416621,0.416292,0.0252635,1.06909e-05,3.41694e-05,0.204817,0.0233392,0.138871,2.79004e-06,0.0147755,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.0805711,0.170369,0.0980968,0.365487,0.178743,0.0889149,0.363192,0.236011,0.203486,0.273398,0.375787,0.4466,0.351067,0.275347,0.000640194,0.0524515,0.241132,0.371414,0.30666,0.303709,0.495883,0.386538,0.159081,0.250964,0.0851927,0.457886,0.156714,0.220231,0.509064,0.196976,0.191517,0.463751,0.0145214,0.307334,0.127092,0.283463,0.201728,0.135386,0.399569,0.273281,0.00128492,0.275089,0.384593,0.138622,0.0105648,0.0656472,0.197805,0.608187,0.0870376,0.0627969,0.173874,0.299887,0.634365,0.205413,0.0165618,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.0189519,0.0719199,0.264884,0.162568,0.0195357,0.163057,0.0260582,0.0233135,0.0900729,0.0953646,0.0146333,0.252184,0.378361,0.0358457,0.0232009,0.447185,0.0171537,0.193601,0.220904,0.222977,0.0664606,0.0542164,0.21801,0.198614,0.186804,0.123324,0.0213665,0.0325925,0.0933115,0.12405,0.179889,0.0279371,0.0430576,0.00376943,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.0701861,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.0132793,0.220319,0.0204324,0.00805527,0.0370716,0.30793,0.0173907,0.159884,0.0363723,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.0377094,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.246105,0.173026,0.200432,0.139785,0.197112,0.0315594,0.156465,0.00899301,0.036274,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.00467879,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.0377035,0.211332,0.018841,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.0457063,0.347036,0.141729,0.0381402,0.0359756,0.200105,0.227491,0.29837,0.0352561,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.325148,0.115817,0.000125371,0.0271615,0.11528,0.194982,0.0195259,0.000383954,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.056548,0.0156618,0.0133429,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.0130722,0.215705,0.252796,0.0228361,0.0750181 | ||
|tfbs_overrepresentation_for_novel_motifs=0.699513,0.869629,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,0.63186,0.820209,0.985163,0.436625,0.925331,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,0.69094,0.242883,0.845342,0.635379,0.743951,2.30584,0.409304,0.842925,0.645155,0.388328,0.795576,1.21459,0.534793,0.439574,1.46099,0.137917,0.596053,0.855276,0.567465,1.18324,0.598234,0.777097,0.259059,0.63803,0.151453,1.72524,0.939121,0.808003,0.247669,0.645308,1.02504,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,0.892517,0.388177,0.891404,1.25741,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,0.502203,4.3166,1.45054,0.430728,0.414196,0.396746,1.12884,1.20029,0.73687,1.16162,1.14559,0.960908,0.498519,1.39759,0.169933,0.303648,0.381882,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,1.14422,1.27663,1.05794,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,1.90788,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,1.63757,0.830777,1.58942,0.594137,0.188952,0.794219,1.10778,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,1.8537,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,0.539692,0.318511,5.59159,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,0.524529,0.936473,0.265282 | |tfbs_overrepresentation_for_novel_motifs=0.699513,0.869629,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,0.63186,0.820209,0.985163,0.436625,0.925331,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,0.69094,0.242883,0.845342,0.635379,0.743951,2.30584,0.409304,0.842925,0.645155,0.388328,0.795576,1.21459,0.534793,0.439574,1.46099,0.137917,0.596053,0.855276,0.567465,1.18324,0.598234,0.777097,0.259059,0.63803,0.151453,1.72524,0.939121,0.808003,0.247669,0.645308,1.02504,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,0.892517,0.388177,0.891404,1.25741,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,0.502203,4.3166,1.45054,0.430728,0.414196,0.396746,1.12884,1.20029,0.73687,1.16162,1.14559,0.960908,0.498519,1.39759,0.169933,0.303648,0.381882,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,1.14422,1.27663,1.05794,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,1.90788,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,1.63757,0.830777,1.58942,0.594137,0.188952,0.794219,1.10778,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,1.8537,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,0.539692,0.318511,5.59159,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,0.524529,0.936473,0.265282 | ||
|tfbs_overrepresentation_jaspar=MA0003.1;1.0927,MA0004.1;0.826076,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;1.24048,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;0.658629,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.341392,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.557638,MA0056.1;0,MA0057.1;0.333427,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;0.492218,MA0061.1;0.456531,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;1.04561,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;0.990225,MA0074.1;0.935474,MA0076.1;0.734647,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.257905,MA0089.1;0,MA0090.1;1.77664,MA0091.1;0.829044,MA0092.1;1.84783,MA0093.1;0.642957,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;2.29491,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;0.752137,MA0146.1;0.707589,MA0147.1;0.565108,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;0.449458,MA0035.2;0.894194,MA0039.2;0.432958,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;0.666381,MA0104.2;1.2307,MA0047.2;0.973066,MA0112.2;0.264678,MA0065.2;0.277623,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;0.312019,MA0155.1;0.711948,MA0156.1;0.669101,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;0.455568,MA0163.1;0.122425,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;1.54885,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;1.40979,MA0442.1;0 | |||
}} | }} |
Revision as of 21:06, 22 January 2013
Full id: C3063_immature_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_CD14CD16
Phase1 CAGE Peaks
Hg19::chr10:97457405..97457451,+ | p@chr10:97457405..97457451 + |
Hg19::chr11:85956323..85956338,+ | p7@EED |
Hg19::chr11:85956340..85956357,+ | p9@EED |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.17e-38 | 98 |
blood island | 2.17e-38 | 98 |
hemolymphoid system | 1.04e-33 | 108 |
bone marrow | 1.82e-30 | 76 |
bone element | 8.32e-29 | 82 |
immune system | 1.34e-27 | 93 |
skeletal element | 1.79e-25 | 90 |
skeletal system | 5.40e-22 | 100 |
lateral plate mesoderm | 2.09e-09 | 203 |
connective tissue | 3.64e-09 | 371 |
blood | 6.81e-07 | 15 |
haemolymphatic fluid | 6.81e-07 | 15 |
organism substance | 6.81e-07 | 15 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 1.0927 |
MA0004.1 | 0.826076 |
MA0006.1 | 0.639288 |
MA0007.1 | 0.804807 |
MA0009.1 | 1.3275 |
MA0014.1 | 1.24048 |
MA0017.1 | 0.686276 |
MA0019.1 | 0.990656 |
MA0024.1 | 1.21731 |
MA0025.1 | 1.46617 |
MA0027.1 | 2.95767 |
MA0028.1 | 0.658629 |
MA0029.1 | 1.23771 |
MA0030.1 | 1.22561 |
MA0031.1 | 1.15713 |
MA0038.1 | 0.94098 |
MA0040.1 | 1.24388 |
MA0041.1 | 0.847069 |
MA0042.1 | 0.810843 |
MA0043.1 | 1.32783 |
MA0046.1 | 1.31611 |
MA0048.1 | 0.341392 |
MA0050.1 | 0.81185 |
MA0051.1 | 0.936307 |
MA0052.1 | 1.24796 |
MA0055.1 | 0.557638 |
MA0056.1 | 0 |
MA0057.1 | 0.333427 |
MA0058.1 | 0.716037 |
MA0059.1 | 0.714521 |
MA0060.1 | 0.492218 |
MA0061.1 | 0.456531 |
MA0063.1 | 0 |
MA0066.1 | 0.941452 |
MA0067.1 | 1.65513 |
MA0068.1 | 1.04561 |
MA0069.1 | 1.31207 |
MA0070.1 | 1.30033 |
MA0071.1 | 0.897953 |
MA0072.1 | 1.29561 |
MA0073.1 | 0.990225 |
MA0074.1 | 0.935474 |
MA0076.1 | 0.734647 |
MA0077.1 | 1.28751 |
MA0078.1 | 1.04495 |
MA0081.1 | 0.714712 |
MA0083.1 | 1.33535 |
MA0084.1 | 1.84562 |
MA0087.1 | 1.29304 |
MA0088.1 | 0.257905 |
MA0089.1 | 0 |
MA0090.1 | 1.77664 |
MA0091.1 | 0.829044 |
MA0092.1 | 1.84783 |
MA0093.1 | 0.642957 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.956299 |
MA0101.1 | 0.646932 |
MA0103.1 | 0.628063 |
MA0105.1 | 0.31555 |
MA0106.1 | 0.986396 |
MA0107.1 | 0.556367 |
MA0108.2 | 1.15387 |
MA0109.1 | 0 |
MA0111.1 | 0.767139 |
MA0113.1 | 2.29491 |
MA0114.1 | 0.549955 |
MA0115.1 | 1.57693 |
MA0116.1 | 0.560723 |
MA0117.1 | 1.36676 |
MA0119.1 | 0.695578 |
MA0122.1 | 1.39371 |
MA0124.1 | 1.53432 |
MA0125.1 | 1.44766 |
MA0130.1 | 0 |
MA0131.1 | 1.06461 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.35921 |
MA0136.1 | 0.948776 |
MA0139.1 | 0.440097 |
MA0140.1 | 0.894983 |
MA0141.1 | 0.712476 |
MA0142.1 | 1.12317 |
MA0143.1 | 1.00455 |
MA0144.1 | 0.531867 |
MA0145.1 | 0.752137 |
MA0146.1 | 0.707589 |
MA0147.1 | 0.565108 |
MA0148.1 | 0.854239 |
MA0149.1 | 0.884158 |
MA0062.2 | 0.449458 |
MA0035.2 | 0.894194 |
MA0039.2 | 0.432958 |
MA0138.2 | 1.04628 |
MA0002.2 | 0.476938 |
MA0137.2 | 0.666381 |
MA0104.2 | 1.2307 |
MA0047.2 | 0.973066 |
MA0112.2 | 0.264678 |
MA0065.2 | 0.277623 |
MA0150.1 | 0.744617 |
MA0151.1 | 0 |
MA0152.1 | 0.902317 |
MA0153.1 | 1.43021 |
MA0154.1 | 0.312019 |
MA0155.1 | 0.711948 |
MA0156.1 | 0.669101 |
MA0157.1 | 1.09377 |
MA0158.1 | 0 |
MA0159.1 | 0.565904 |
MA0160.1 | 0.871361 |
MA0161.1 | 0 |
MA0162.1 | 0.455568 |
MA0163.1 | 0.122425 |
MA0164.1 | 1.01792 |
MA0080.2 | 0.643061 |
MA0018.2 | 0.987913 |
MA0099.2 | 0.902716 |
MA0079.2 | 1.54885 |
MA0102.2 | 1.88331 |
MA0258.1 | 0.519674 |
MA0259.1 | 1.40979 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
ATF3#467 | 2 | 14.9754496840058 | 0.00576829454079388 | 0.0259435387600005 |
BCLAF1#9774 | 2 | 14.4350984067479 | 0.00620114743554613 | 0.0273728502544802 |
MAX#4149 | 3 | 6.45255550900712 | 0.00372191383426551 | 0.0185693860859339 |
NFKB1#4790 | 3 | 5.48806342419384 | 0.00604938181565543 | 0.0268550279454747 |
SIX5#147912 | 2 | 11.391143570306 | 0.00987382008142903 | 0.0370579615296067 |
SMARCB1#6598 | 2 | 12.1684771874383 | 0.00867500222192174 | 0.0329697437065242 |
SPI1#6688 | 3 | 8.20432350852273 | 0.00181059318941052 | 0.0108794972733931 |
TFAP2A#7020 | 2 | 11.0124229153633 | 0.0105499065521556 | 0.0389914958737555 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.