FFCP PHASE1:Hg19::chr10:45869683..45869708,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=240|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=435|TSSclassifier=S|UniProt=P09917|association_with_transcript=8bp_to_ENST00000374391_5end|coexpression_cluster_id=C17|description=CAGE_peak_3_at_ALOX5_5end|id=chr10:45869683..45869708,+|ontology_enrichment_celltype=CL:0000738!1.52e-44!140;CL:0000766!1.78e-41!76;CL:0000037!1.09e-38!172;CL:0000566!1.09e-38!172;CL:0002032!1.07e-36!165;CL:0000837!1.07e-36!165;CL:0000557!7.80e-36!71;CL:0000839!1.75e-35!70;CL:0002031!3.52e-35!124;CL:0000763!1.46e-34!112;CL:0000049!1.46e-34!112;CL:0000988!2.04e-34!182;CL:0002009!1.52e-32!65;CL:0002057!2.42e-32!42;CL:0002087!1.64e-31!119;CL:0000860!1.96e-31!45;CL:0002194!7.89e-31!63;CL:0000576!7.89e-31!63;CL:0000040!7.89e-31!63;CL:0000559!7.89e-31!63;CL:0000945!3.53e-10!24;CL:0000826!3.53e-10!24;CL:0000236!1.78e-09!14;CL:0000094!1.03e-07!8;CL:0002393!2.48e-07!9;CL:0002397!2.48e-07!9|ontology_enrichment_celltype_v019=CL:0000860;1.48e-32;33!CL:0002057;1.48e-32;33!CL:0000473;5.88e-31;39!CL:0000234;5.88e-31;39!CL:0000576;4.03e-29;48!CL:0000766;2.97e-27;69!CL:0000738;1.50e-12;136!CL:0000763;1.79e-12;100!CL:0000236;2.28e-12;13!CL:0002087;3.62e-12;104!CL:0000945;1.15e-10;24!CL:0000094;4.59e-10;8!CL:0000988;1.90e-07;177!CL:0000097;2.24e-07;5!CL:0002393;5.70e-07;6!CL:0002397;5.70e-07;6|ontology_enrichment_celltype_v019_2=CL:0000766,4.28e-58,72;CL:0000738,2.25e-53,136;CL:0000557,1.91e-50,67;CL:0000839,1.94e-48,66;CL:0000473,1.99e-48,48;CL:0000234,1.99e-48,48;CL:0002009,1.26e-45,61;CL:0000763,1.95e-44,108;CL:0000049,1.95e-44,108;CL:0000860,6.10e-44,42;CL:0002057,6.10e-44,42;CL:0002194,3.23e-43,59;CL:0000576,3.23e-43,59;CL:0000040,3.23e-43,59;CL:0000559,3.23e-43,59;CL:0000037,7.01e-43,168;CL:0002032,1.41e-41,161;CL:0000837,1.41e-41,161;CL:0002031,7.82e-41,120;CL:0000988,6.75e-39,177;CL:0002087,7.03e-37,115;CL:0000236,3.58e-11,14;CL:0000945,1.16e-10,24;CL:0000826,1.16e-10,24;CL:0000094,5.05e-10,8;CL:0002393,1.69e-09,9;CL:0002397,1.69e-09,9;CL:0000097,2.26e-07,5;CL:0002028,2.26e-07,5|ontology_enrichment_development_v019=CL:0002057;1.28e-31;42!CL:0000049;4.64e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.82e-36!102;UBERON:0003061!3.82e-36!102;UBERON:0007023!2.38e-32!115;UBERON:0002193!6.19e-32!112;UBERON:0002371!2.80e-30!80;UBERON:0001474!4.56e-26!86;UBERON:0004765!1.98e-19!101;UBERON:0001434!1.98e-19!101;UBERON:0002405!4.86e-19!115;UBERON:0003081!4.96e-08!216;UBERON:0001049!6.85e-08!57;UBERON:0005068!6.85e-08!57;UBERON:0006241!6.85e-08!57;UBERON:0007135!6.85e-08!57;UBERON:0000178!3.74e-07!15;UBERON:0000179!3.74e-07!15;UBERON:0000463!3.74e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;5.91e-10;15!UBERON:0000179;5.91e-10;15!UBERON:0000463;5.91e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.27e-51,98;UBERON:0003061,2.27e-51,98;UBERON:0002193,6.28e-47,108;UBERON:0002371,4.78e-43,76;UBERON:0001474,3.52e-38,82;UBERON:0002405,1.73e-37,93;UBERON:0004765,9.78e-33,90;UBERON:0001434,4.09e-28,100;UBERON:0007023,5.60e-19,114;UBERON:0003081,2.22e-16,203;UBERON:0002204,2.79e-10,167;UBERON:0000178,5.56e-10,15;UBERON:0000179,5.56e-10,15;UBERON:0000463,5.56e-10,15;UBERON:0000926,4.61e-07,315;UBERON:0004120,4.61e-07,315;UBERON:0006603,4.61e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.572471974262113,0,0,0.229240217243854,0.0821005894499457,0.236132343941038,18.0947567350496,4.22212337906934,9.59859964559671,0,0.30120591877825,0,23.3176273746708,9.95184627411951,0.293600439334847,8.86392653651004,10.8294001633877,10.8505435357926,6.26963327871788,5.83008598834163,7.46969146139141,14.9760185942952,25.3176882271502,29.3526714037258,14.6430293250581,13.1573724166984,15.7950249156503,14.9600044007518,19.7243744027408,19.391542850864,13.7898272294647,17.4280864567633,18.9597081232078,15.247629502951,13.9182136529501,17.5284317867166,14.9981107261742,15.7255223267286,22.3767994029664,29.3567657166177,30.9168669313529,54.5567680681849,15.6712988859435,14.1846306172785,24.912889959823,15.0749199154046,22.4237654920687,20.8501290916912,19.3727840842678,16.2042159834528,21.2029799585393,11.4077854608449,14.0318837976929,14.2567878945696,16.5123087785348,15.1678661769921,15.4296563229197,7.41033133727246,11.5371672775472,9.6812001495256,10.5597746676794,9.83049500271837,8.00558328477199,10.6682555641627,11.2110876370083,9.19603903927173,8.59358334620321,9.54053754535364,3.98449078376614,9.98303221930596,9.93910393125595,1.32171328579026,2.24203425192614,0.526768169550154,0,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.903450714466637,0.383959833463255,0,1.18388626022008,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,4.78073625566651,0.364295288292542,0,0,0,0,0.238490624305342,1.14398982156026,0.74291500265913,0,0,0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872,0.534434810531121,0.0918948995348449,0.50141507858475,0.909344378618873,0.535928260312357,2.48750831837634,3.10298987585686,3.19850972851471,0.476128862927481,0.516711278688049,1.36564371450887,0,1.52753179867596,0.404234377916439,0.435433495793923,0.342233301085281,3.56965880977314,4.66194335052396,0.99798106963804,0.89543595472072,0,0,4.49126010532934,2.34640942403454,1.1001729976458,0.406896178315738,8.65483806441166,5.23311863336668,9.61705476909699|short_description=p3@ALOX5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=240 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=435 | |||
|TSSclassifier=S | |||
|UniProt=P09917 | |||
|association_with_transcript=8bp_to_ENST00000374391_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_ALOX5_5end | |||
|id=chr10:45869683..45869708,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.52e-44!140;CL:0000766!1.78e-41!76;CL:0000037!1.09e-38!172;CL:0000566!1.09e-38!172;CL:0002032!1.07e-36!165;CL:0000837!1.07e-36!165;CL:0000557!7.80e-36!71;CL:0000839!1.75e-35!70;CL:0002031!3.52e-35!124;CL:0000763!1.46e-34!112;CL:0000049!1.46e-34!112;CL:0000988!2.04e-34!182;CL:0002009!1.52e-32!65;CL:0002057!2.42e-32!42;CL:0002087!1.64e-31!119;CL:0000860!1.96e-31!45;CL:0002194!7.89e-31!63;CL:0000576!7.89e-31!63;CL:0000040!7.89e-31!63;CL:0000559!7.89e-31!63;CL:0000945!3.53e-10!24;CL:0000826!3.53e-10!24;CL:0000236!1.78e-09!14;CL:0000094!1.03e-07!8;CL:0002393!2.48e-07!9;CL:0002397!2.48e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-32;33!CL:0002057;1.48e-32;33!CL:0000473;5.88e-31;39!CL:0000234;5.88e-31;39!CL:0000576;4.03e-29;48!CL:0000766;2.97e-27;69!CL:0000738;1.50e-12;136!CL:0000763;1.79e-12;100!CL:0000236;2.28e-12;13!CL:0002087;3.62e-12;104!CL:0000945;1.15e-10;24!CL:0000094;4.59e-10;8!CL:0000988;1.90e-07;177!CL:0000097;2.24e-07;5!CL:0002393;5.70e-07;6!CL:0002397;5.70e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.28e-58,72;CL:0000738,2.25e-53,136;CL:0000557,1.91e-50,67;CL:0000839,1.94e-48,66;CL:0000473,1.99e-48,48;CL:0000234,1.99e-48,48;CL:0002009,1.26e-45,61;CL:0000763,1.95e-44,108;CL:0000049,1.95e-44,108;CL:0000860,6.10e-44,42;CL:0002057,6.10e-44,42;CL:0002194,3.23e-43,59;CL:0000576,3.23e-43,59;CL:0000040,3.23e-43,59;CL:0000559,3.23e-43,59;CL:0000037,7.01e-43,168;CL:0002032,1.41e-41,161;CL:0000837,1.41e-41,161;CL:0002031,7.82e-41,120;CL:0000988,6.75e-39,177;CL:0002087,7.03e-37,115;CL:0000236,3.58e-11,14;CL:0000945,1.16e-10,24;CL:0000826,1.16e-10,24;CL:0000094,5.05e-10,8;CL:0002393,1.69e-09,9;CL:0002397,1.69e-09,9;CL:0000097,2.26e-07,5;CL:0002028,2.26e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-31;42!CL:0000049;4.64e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.82e-36!102;UBERON:0003061!3.82e-36!102;UBERON:0007023!2.38e-32!115;UBERON:0002193!6.19e-32!112;UBERON:0002371!2.80e-30!80;UBERON:0001474!4.56e-26!86;UBERON:0004765!1.98e-19!101;UBERON:0001434!1.98e-19!101;UBERON:0002405!4.86e-19!115;UBERON:0003081!4.96e-08!216;UBERON:0001049!6.85e-08!57;UBERON:0005068!6.85e-08!57;UBERON:0006241!6.85e-08!57;UBERON:0007135!6.85e-08!57;UBERON:0000178!3.74e-07!15;UBERON:0000179!3.74e-07!15;UBERON:0000463!3.74e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.91e-10;15!UBERON:0000179;5.91e-10;15!UBERON:0000463;5.91e-10;15 | |||
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| |||
|short_description=p3@ALOX5 | |||
}} |
Revision as of 13:28, 10 September 2013
Short description: | p3@ALOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ALOX5_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 8bp_to_ENST00000374391_5end |
EntrezGene: | ALOX5 |
HGNC: | 435 |
UniProt: | P09917 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.28e-58 | 72 |
leukocyte | 2.25e-53 | 136 |
granulocyte monocyte progenitor cell | 1.91e-50 | 67 |
myeloid lineage restricted progenitor cell | 1.94e-48 | 66 |
defensive cell | 1.99e-48 | 48 |
phagocyte | 1.99e-48 | 48 |
macrophage dendritic cell progenitor | 1.26e-45 | 61 |
myeloid cell | 1.95e-44 | 108 |
common myeloid progenitor | 1.95e-44 | 108 |
classical monocyte | 6.10e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.10e-44 | 42 |
monopoietic cell | 3.23e-43 | 59 |
monocyte | 3.23e-43 | 59 |
monoblast | 3.23e-43 | 59 |
promonocyte | 3.23e-43 | 59 |
hematopoietic stem cell | 7.01e-43 | 168 |
hematopoietic oligopotent progenitor cell | 1.41e-41 | 161 |
hematopoietic multipotent progenitor cell | 1.41e-41 | 161 |
hematopoietic lineage restricted progenitor cell | 7.82e-41 | 120 |
hematopoietic cell | 6.75e-39 | 177 |
nongranular leukocyte | 7.03e-37 | 115 |
B cell | 3.58e-11 | 14 |
lymphocyte of B lineage | 1.16e-10 | 24 |
pro-B cell | 1.16e-10 | 24 |
granulocyte | 5.05e-10 | 8 |
intermediate monocyte | 1.69e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.69e-09 | 9 |
mast cell | 2.26e-07 | 5 |
basophil mast progenitor cell | 2.26e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.27e-51 | 98 |
blood island | 2.27e-51 | 98 |
hemolymphoid system | 6.28e-47 | 108 |
bone marrow | 4.78e-43 | 76 |
bone element | 3.52e-38 | 82 |
immune system | 1.73e-37 | 93 |
skeletal element | 9.78e-33 | 90 |
skeletal system | 4.09e-28 | 100 |
adult organism | 5.60e-19 | 114 |
lateral plate mesoderm | 2.22e-16 | 203 |
musculoskeletal system | 2.79e-10 | 167 |
blood | 5.56e-10 | 15 |
haemolymphatic fluid | 5.56e-10 | 15 |
organism substance | 5.56e-10 | 15 |
mesoderm | 4.61e-07 | 315 |
mesoderm-derived structure | 4.61e-07 | 315 |
presumptive mesoderm | 4.61e-07 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.