FFCP PHASE1:Hg19::chr10:80838488..80838491,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:80838488..80838491,+|id=chr10:80838488..80838491,+|ontology_enrichment_celltype=CL:0002057!2.55e-16!42;CL:0000766!3.44e-16!76;CL:0000557!5.70e-15!71;CL:0000839!5.78e-15!70;CL:0000763!4.96e-14!112;CL:0000049!4.96e-14!112;CL:0002194!6.16e-14!63;CL:0000576!6.16e-14!63;CL:0000040!6.16e-14!63;CL:0000559!6.16e-14!63;CL:0000860!6.38e-14!45;CL:0002009!6.63e-14!65;CL:0000037!9.16e-07!172;CL:0000566!9.16e-07!172|ontology_enrichment_celltype_v019=CL:0000766;1.04e-15;69!CL:0000576;7.02e-15;48!CL:0000473;2.02e-14;39!CL:0000234;2.02e-14;39!CL:0000860;6.93e-13;33!CL:0002057;6.93e-13;33!CL:0000763;3.80e-09;100!CL:0000097;6.45e-09;5!CL:0000738;7.61e-07;136|ontology_enrichment_celltype_v019_2=CL:0000766,3.35e-31,72;CL:0000557,2.16e-29,67;CL:0000763,1.29e-28,108;CL:0000049,1.29e-28,108;CL:0000839,8.80e-28,66;CL:0002009,4.78e-24,61;CL:0000473,1.41e-23,48;CL:0000234,1.41e-23,48;CL:0002194,5.07e-23,59;CL:0000576,5.07e-23,59;CL:0000040,5.07e-23,59;CL:0000559,5.07e-23,59;CL:0000860,2.16e-20,42;CL:0002057,2.16e-20,42;CL:0000037,5.52e-20,168;CL:0000738,4.70e-19,136;CL:0002032,6.31e-19,161;CL:0000837,6.31e-19,161;CL:0000988,2.26e-18,177;CL:0002031,4.55e-16,120;CL:0002087,1.91e-13,115;CL:0000097,5.69e-09,5;CL:0002028,5.69e-09,5;CL:0000134,4.96e-08,354;CL:0002393,7.59e-08,9;CL:0002397,7.59e-08,9;CL:0002320,1.22e-07,361;CL:0000219,9.62e-07,386|ontology_enrichment_development_v019=CL:0002057;2.27e-15;42!CL:0000049;1.62e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.05e-13!102;UBERON:0003061!5.05e-13!102;UBERON:0002371!5.45e-12!80;UBERON:0001474!7.01e-12!86;UBERON:0002193!7.30e-11!112;UBERON:0004765!1.31e-08!101;UBERON:0001434!1.31e-08!101;UBERON:0002405!8.34e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;9.41e-08;15!UBERON:0000179;9.41e-08;15!UBERON:0000463;9.41e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-28,98;UBERON:0003061,1.17e-28,98;UBERON:0002193,4.73e-25,108;UBERON:0002371,6.46e-25,76;UBERON:0001474,1.76e-22,82;UBERON:0004765,9.66e-20,90;UBERON:0002405,7.75e-19,93;UBERON:0001434,6.08e-17,100;UBERON:0003081,1.13e-12,203;UBERON:0002204,6.57e-10,167;UBERON:0000178,1.11e-07,15;UBERON:0000179,1.11e-07,15;UBERON:0000463,1.11e-07,15;UBERON:0002384,4.17e-07,371|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.572471974262113,1.09499540058307,0.376627918784408,0.229240217243854,0,0,1.96682138424452,0.767658796194425,2.63187409637329,0,0.30120591877825,0.369754010166788,0.154934401160603,0,0.293600439334847,8.30993112797816,11.2304890583279,10.4165217943609,1.79132379391939,0.32389366601898,1.28787783817093,1.30858414901608,0.755751887377619,0.727752183563449,1.85943229524548,1.23350366406548,0.929119112685311,0.28769239232215,1.0246428261164,0.236482229888585,3.44745680736619,1.29096936716765,0,1.31769637679823,2.45615535052061,0.674170453335254,0.918251677112708,0.320929027076094,0,0.659702600373432,0.797854630486527,0.852449501065388,1.16083695451434,0,1.24564449799115,2.26123798731069,2.08593167368081,0.217188844705117,2.42159801053347,0.368277635987565,0.316462387440884,0.633765858935825,0.637812899895131,0.419317291016752,2.13424399178341,1.65194582125657,0.964353520182481,1.71007646244749,1.79025009479181,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,3.36305137788922,0,0.393419540227666,0,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0,0,0,0.390178042679635,0.657751618414705,0.276350017785848,0,0.296573126324121,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,1.87208137048455,0.579297615531196,0,0,0,1.0843174571537,1.00267582127178,0.434539556882471,0,0,1.13441780596881,1.33037638477538,0.263504357079378,0.130979075497713,0,0,0.649094787309367,1.0447784237956,0.398873881556595,0.715471872916026,0,0,0.993812036833525,0.860234595106124,0,0.56530794192401,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0,0,0,0.446498641420399,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.529636723252875,0.860509862246441,0,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0.408308342509787,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0.309157587715317,0.772921620136887,0.18611685633159,0.675105328965065,0.389748020644795,0.252433774244115,0.0920498986422993,0.484938170456436,0.355009592516614,0,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,0,0.882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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:80838488..80838491,+ | |||
|id=chr10:80838488..80838491,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.55e-16!42;CL:0000766!3.44e-16!76;CL:0000557!5.70e-15!71;CL:0000839!5.78e-15!70;CL:0000763!4.96e-14!112;CL:0000049!4.96e-14!112;CL:0002194!6.16e-14!63;CL:0000576!6.16e-14!63;CL:0000040!6.16e-14!63;CL:0000559!6.16e-14!63;CL:0000860!6.38e-14!45;CL:0002009!6.63e-14!65;CL:0000037!9.16e-07!172;CL:0000566!9.16e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000766;1.04e-15;69!CL:0000576;7.02e-15;48!CL:0000473;2.02e-14;39!CL:0000234;2.02e-14;39!CL:0000860;6.93e-13;33!CL:0002057;6.93e-13;33!CL:0000763;3.80e-09;100!CL:0000097;6.45e-09;5!CL:0000738;7.61e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.35e-31,72;CL:0000557,2.16e-29,67;CL:0000763,1.29e-28,108;CL:0000049,1.29e-28,108;CL:0000839,8.80e-28,66;CL:0002009,4.78e-24,61;CL:0000473,1.41e-23,48;CL:0000234,1.41e-23,48;CL:0002194,5.07e-23,59;CL:0000576,5.07e-23,59;CL:0000040,5.07e-23,59;CL:0000559,5.07e-23,59;CL:0000860,2.16e-20,42;CL:0002057,2.16e-20,42;CL:0000037,5.52e-20,168;CL:0000738,4.70e-19,136;CL:0002032,6.31e-19,161;CL:0000837,6.31e-19,161;CL:0000988,2.26e-18,177;CL:0002031,4.55e-16,120;CL:0002087,1.91e-13,115;CL:0000097,5.69e-09,5;CL:0002028,5.69e-09,5;CL:0000134,4.96e-08,354;CL:0002393,7.59e-08,9;CL:0002397,7.59e-08,9;CL:0002320,1.22e-07,361;CL:0000219,9.62e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-15;42!CL:0000049;1.62e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.05e-13!102;UBERON:0003061!5.05e-13!102;UBERON:0002371!5.45e-12!80;UBERON:0001474!7.01e-12!86;UBERON:0002193!7.30e-11!112;UBERON:0004765!1.31e-08!101;UBERON:0001434!1.31e-08!101;UBERON:0002405!8.34e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.41e-08;15!UBERON:0000179;9.41e-08;15!UBERON:0000463;9.41e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-28,98;UBERON:0003061,1.17e-28,98;UBERON:0002193,4.73e-25,108;UBERON:0002371,6.46e-25,76;UBERON:0001474,1.76e-22,82;UBERON:0004765,9.66e-20,90;UBERON:0002405,7.75e-19,93;UBERON:0001434,6.08e-17,100;UBERON:0003081,1.13e-12,203;UBERON:0002204,6.57e-10,167;UBERON:0000178,1.11e-07,15;UBERON:0000179,1.11e-07,15;UBERON:0000463,1.11e-07,15;UBERON:0002384,4.17e-07,371 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.572471974262113,1.09499540058307,0.376627918784408,0.229240217243854,0,0,1.96682138424452,0.767658796194425,2.63187409637329,0,0.30120591877825,0.369754010166788,0.154934401160603,0,0.293600439334847,8.30993112797816,11.2304890583279,10.4165217943609,1.79132379391939,0.32389366601898,1.28787783817093,1.30858414901608,0.755751887377619,0.727752183563449,1.85943229524548,1.23350366406548,0.929119112685311,0.28769239232215,1.0246428261164,0.236482229888585,3.44745680736619,1.29096936716765,0,1.31769637679823,2.45615535052061,0.674170453335254,0.918251677112708,0.320929027076094,0,0.659702600373432,0.797854630486527,0.852449501065388,1.16083695451434,0,1.24564449799115,2.26123798731069,2.08593167368081,0.217188844705117,2.42159801053347,0.368277635987565,0.316462387440884,0.633765858935825,0.637812899895131,0.419317291016752,2.13424399178341,1.65194582125657,0.964353520182481,1.71007646244749,1.79025009479181,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,3.36305137788922,0,0.393419540227666,0,0.205601498999509,0,0,0.473447805734733,0,0.222820913770347,0.294605907474837,0,0,0,0.390178042679635,0.657751618414705,0.276350017785848,0,0.296573126324121,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,1.87208137048455,0.579297615531196,0,0,0,1.0843174571537,1.00267582127178,0.434539556882471,0,0,1.13441780596881,1.33037638477538,0.263504357079378,0.130979075497713,0,0,0.649094787309367,1.0447784237956,0.398873881556595,0.715471872916026,0,0,0.993812036833525,0.860234595106124,0,0.56530794192401,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0,0,0,0.446498641420399,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.529636723252875,0.860509862246441,0,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0.408308342509787,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0.213557388818567,0.211931901159562,0.600182192168805,0.309157587715317,0.772921620136887,0.18611685633159,0.675105328965065,0.389748020644795,0.252433774244115,0.0920498986422993,0.484938170456436,0.355009592516614,0,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0.982827216677626,0,0.882926198829301,0.491953754172454,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0.462985512576611,0,0,0,1.96973604869918,0.468008530278475,1.33768046059855,0,0,0,0,0,0,0,1.14462964217194,1.86595303986695,4.61183850934277,2.01987893482208,0,0.381988425558278,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0,0,2.51128545716063,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.61642896765115,0.358121926479791,0,0.197030760201927,0.646882724578552,1.15508732651774,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,2.24702107184155,0,0.414415513436035,0,0,0,0.415941723061614,0.713715955188647,0.630809660135739,0,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0.620304078368662,2.15714200818617,1.17400313583789,0,0,0,0,1.07423381301644,0.561320188866147,0,0,0.482561763430822,0,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0.241718899183244,0,0.0920809889358963,0.34444334449382,0.364182336013434,0.393373244878272,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.0915694648183434,0.495056999523528,0,0,0,0,0.154048617114644,1.07452572308291,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0.638063562472921,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0,0,0,0.95460974377781,0,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,2.02979043692868,3.0585488285695,0,0.238231775457789,0,1.29694662238543,1.08006287447623,1.58625035258854,0.106824071127473,0,0.490080431962063,0,0.28853842595289,0.0711418433484141,0,0.199579371432817,1.91505370132367,1.48171507906718,0,0.280797178113459,1.36940807419915,0.156679895773023,2.50634477090067,0,0.642352300414798,0.80719882876419,0,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0,1.4098700508785,0.18714054040822,0.293016358543788,0,1.00299045849731,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0.222617410045812,0,5.70038601945582,0.597743964753209,0.276283915531148,0.503865495708552,0.306806047506464,0.246169610922139,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0.185536196323703,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0,0.344743373241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| |||
|short_description=p@chr10:80838488..80838491,+ | |||
}} |
Revision as of 14:31, 10 September 2013
Short description: | p@chr10:80838488..80838491, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:80838488..80838491, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.35e-31 | 72 |
granulocyte monocyte progenitor cell | 2.16e-29 | 67 |
myeloid cell | 1.29e-28 | 108 |
common myeloid progenitor | 1.29e-28 | 108 |
myeloid lineage restricted progenitor cell | 8.80e-28 | 66 |
macrophage dendritic cell progenitor | 4.78e-24 | 61 |
defensive cell | 1.41e-23 | 48 |
phagocyte | 1.41e-23 | 48 |
monopoietic cell | 5.07e-23 | 59 |
monocyte | 5.07e-23 | 59 |
monoblast | 5.07e-23 | 59 |
promonocyte | 5.07e-23 | 59 |
classical monocyte | 2.16e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.16e-20 | 42 |
hematopoietic stem cell | 5.52e-20 | 168 |
leukocyte | 4.70e-19 | 136 |
hematopoietic oligopotent progenitor cell | 6.31e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.31e-19 | 161 |
hematopoietic cell | 2.26e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 4.55e-16 | 120 |
nongranular leukocyte | 1.91e-13 | 115 |
mast cell | 5.69e-09 | 5 |
basophil mast progenitor cell | 5.69e-09 | 5 |
mesenchymal cell | 4.96e-08 | 354 |
intermediate monocyte | 7.59e-08 | 9 |
CD14-positive, CD16-positive monocyte | 7.59e-08 | 9 |
connective tissue cell | 1.22e-07 | 361 |
motile cell | 9.62e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.17e-28 | 98 |
blood island | 1.17e-28 | 98 |
hemolymphoid system | 4.73e-25 | 108 |
bone marrow | 6.46e-25 | 76 |
bone element | 1.76e-22 | 82 |
skeletal element | 9.66e-20 | 90 |
immune system | 7.75e-19 | 93 |
skeletal system | 6.08e-17 | 100 |
lateral plate mesoderm | 1.13e-12 | 203 |
musculoskeletal system | 6.57e-10 | 167 |
blood | 1.11e-07 | 15 |
haemolymphatic fluid | 1.11e-07 | 15 |
organism substance | 1.11e-07 | 15 |
connective tissue | 4.17e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.