FFCP PHASE1:Hg19::chr10:86998558..86998561,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C364|description=CAGE_peak_at_chr10:86998558..86998561,+|id=chr10:86998558..86998561,+|ontology_enrichment_celltype=CL:0002057!3.47e-47!42;CL:0000860!4.02e-43!45;CL:0000557!4.70e-35!71;CL:0002009!2.51e-34!65;CL:0002194!7.23e-34!63;CL:0000576!7.23e-34!63;CL:0000040!7.23e-34!63;CL:0000559!7.23e-34!63;CL:0000839!7.28e-34!70;CL:0000766!8.74e-32!76;CL:0000763!1.29e-23!112;CL:0000049!1.29e-23!112;CL:0000738!4.77e-15!140;CL:0002031!7.66e-15!124;CL:0002087!1.24e-12!119;CL:0002032!7.44e-12!165;CL:0000837!7.44e-12!165;CL:0000037!8.56e-11!172;CL:0000566!8.56e-11!172;CL:0000988!4.86e-10!182;CL:0000197!8.07e-08!6;CL:0000098!8.07e-08!6;CL:0002167!8.07e-08!6;CL:0000048!3.74e-07!430;CL:0000723!9.13e-07!436|ontology_enrichment_celltype_v019=CL:0000860;1.29e-49;33!CL:0002057;1.29e-49;33!CL:0000473;1.75e-41;39!CL:0000234;1.75e-41;39!CL:0000576;7.71e-30;48!CL:0000766;1.06e-21;69!CL:0000763;4.44e-09;100!CL:0000453;8.69e-09;5!CL:0002087;2.51e-07;104!CL:0000219;4.46e-07;193!CL:0000738;7.49e-07;136|ontology_enrichment_celltype_v019_2=CL:0000473,5.80e-60,48;CL:0000234,5.80e-60,48;CL:0000860,3.83e-57,42;CL:0002057,3.83e-57,42;CL:0002009,6.39e-47,61;CL:0002194,6.50e-46,59;CL:0000576,6.50e-46,59;CL:0000040,6.50e-46,59;CL:0000559,6.50e-46,59;CL:0000557,2.30e-44,67;CL:0000839,1.61e-42,66;CL:0000766,1.24e-40,72;CL:0000763,1.67e-30,108;CL:0000049,1.67e-30,108;CL:0000738,2.97e-23,136;CL:0002031,1.13e-21,120;CL:0002087,3.06e-20,115;CL:0002032,6.21e-18,161;CL:0000837,6.21e-18,161;CL:0000037,9.83e-17,168;CL:0000988,2.75e-16,177;CL:0000134,5.13e-11,354;CL:0000048,6.66e-11,427;CL:0000723,1.53e-10,433;CL:0002320,1.55e-10,361;CL:0000219,3.91e-10,386;CL:0000034,4.49e-10,441;CL:0000453,1.02e-08,5;CL:0002393,7.35e-07,9;CL:0002397,7.35e-07,9|ontology_enrichment_development_v019=CL:0002057;8.92e-42;42!CL:0000049;4.17e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.98e-31!80;UBERON:0001474!9.85e-28!86;UBERON:0004765!4.14e-25!101;UBERON:0001434!4.14e-25!101;UBERON:0002390!4.65e-21!102;UBERON:0003061!4.65e-21!102;UBERON:0002193!6.05e-20!112;UBERON:0002405!4.90e-19!115;UBERON:0002204!8.40e-17!167;UBERON:0001737!4.85e-11!9;UBERON:0003081!1.92e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.19e-38,76;UBERON:0004765,1.82e-34,90;UBERON:0001474,1.99e-34,82;UBERON:0001434,5.73e-30,100;UBERON:0002405,3.58e-29,93;UBERON:0002390,3.56e-27,98;UBERON:0003061,3.56e-27,98;UBERON:0002193,9.76e-24,108;UBERON:0002204,1.82e-21,167;UBERON:0003081,2.00e-17,203;UBERON:0002384,6.96e-10,371;UBERON:0000926,1.46e-09,315;UBERON:0004120,1.46e-09,315;UBERON:0006603,1.46e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,1.80808358407193,1.46062018077475,1.95173119516203,0,0,0.313454721478088,0,0,0,0,0,0,0,0,2.32224184974114,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0.726991193897824,2.26725566213286,0.970336244751265,2.09186133215116,2.05583944010913,2.47765096716083,1.43846196161075,1.0246428261164,4.02019790810595,0.689491361473237,8.39130088658974,5.41705946377367,1.50593871634084,3.82068610080984,4.26974620445661,3.36692281607993,1.28371610830437,5.11469700639233,0.329851300186716,1.19678194572979,2.13112375266347,3.77272010217159,8.5107783703671,6.22822248995575,3.26623264833766,3.65038042894141,3.25783267057675,1.81619850790011,4.05105399586321,4.43047342417238,1.47878700418359,1.91343869968539,2.72556239160889,0.673971786878971,0.600707571366025,1.12507910687956,0,1.79025009479181,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.222820913770347,1.17842362989935,0.886135578334485,0.812411591295047,0.128091319725675,0,0.164437904603676,0,0,0,0,0,1.0197840842781,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19656404608826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04541115870403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0.506328996723799,0,0,0,1.93975268182574,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.674338760312407,1.92808823906786,0.441175890929576,0.653638332277218,0.474541238222193,0.404493924480493,0.588664395376038,3.07797725557112,0,0,0,0,0,0,0,0,0,2.57351715447788,0,0,0,0,0,0,0,2.43453850447661,1.40890433082986,0,0.925971025153221,0.761016608938393,0,0,0,0,0,0,2.51973192298289,1.84307626415102,0,0,0,0,0,0.207328115540772,1.44119953416961,0.37872730027914,0.952468414382536,0,0,0,0.308482478109971,2.10240140490742,3.42991719156694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.01354254859276,6.32501818449095,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.831883446123229,0.713715955188647,0.788512075169673,1.28855556491985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52463103837025,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,1.43411352204052,1.67023369722306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,1.67121139316383,1.18785872333055,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0,0,0,0,0,0,0,0,0,0,0,0,2.55200927785536,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,2.0247650239635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0.899606224327209,0,3.31764966272684,0.265841714557995,1.5652351854352,0,3.04644169735036,0,0,0,3.71227007902795,1.99047944349308,0,3.77735275701072,6.39824028655246,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,4.67664741214532,2.25870228532717,1.4720885483026,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5510319283216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:86998558..86998561,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_at_chr10:86998558..86998561,+ | |||
|id=chr10:86998558..86998561,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.47e-47!42;CL:0000860!4.02e-43!45;CL:0000557!4.70e-35!71;CL:0002009!2.51e-34!65;CL:0002194!7.23e-34!63;CL:0000576!7.23e-34!63;CL:0000040!7.23e-34!63;CL:0000559!7.23e-34!63;CL:0000839!7.28e-34!70;CL:0000766!8.74e-32!76;CL:0000763!1.29e-23!112;CL:0000049!1.29e-23!112;CL:0000738!4.77e-15!140;CL:0002031!7.66e-15!124;CL:0002087!1.24e-12!119;CL:0002032!7.44e-12!165;CL:0000837!7.44e-12!165;CL:0000037!8.56e-11!172;CL:0000566!8.56e-11!172;CL:0000988!4.86e-10!182;CL:0000197!8.07e-08!6;CL:0000098!8.07e-08!6;CL:0002167!8.07e-08!6;CL:0000048!3.74e-07!430;CL:0000723!9.13e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-49;33!CL:0002057;1.29e-49;33!CL:0000473;1.75e-41;39!CL:0000234;1.75e-41;39!CL:0000576;7.71e-30;48!CL:0000766;1.06e-21;69!CL:0000763;4.44e-09;100!CL:0000453;8.69e-09;5!CL:0002087;2.51e-07;104!CL:0000219;4.46e-07;193!CL:0000738;7.49e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.80e-60,48;CL:0000234,5.80e-60,48;CL:0000860,3.83e-57,42;CL:0002057,3.83e-57,42;CL:0002009,6.39e-47,61;CL:0002194,6.50e-46,59;CL:0000576,6.50e-46,59;CL:0000040,6.50e-46,59;CL:0000559,6.50e-46,59;CL:0000557,2.30e-44,67;CL:0000839,1.61e-42,66;CL:0000766,1.24e-40,72;CL:0000763,1.67e-30,108;CL:0000049,1.67e-30,108;CL:0000738,2.97e-23,136;CL:0002031,1.13e-21,120;CL:0002087,3.06e-20,115;CL:0002032,6.21e-18,161;CL:0000837,6.21e-18,161;CL:0000037,9.83e-17,168;CL:0000988,2.75e-16,177;CL:0000134,5.13e-11,354;CL:0000048,6.66e-11,427;CL:0000723,1.53e-10,433;CL:0002320,1.55e-10,361;CL:0000219,3.91e-10,386;CL:0000034,4.49e-10,441;CL:0000453,1.02e-08,5;CL:0002393,7.35e-07,9;CL:0002397,7.35e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.92e-42;42!CL:0000049;4.17e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.98e-31!80;UBERON:0001474!9.85e-28!86;UBERON:0004765!4.14e-25!101;UBERON:0001434!4.14e-25!101;UBERON:0002390!4.65e-21!102;UBERON:0003061!4.65e-21!102;UBERON:0002193!6.05e-20!112;UBERON:0002405!4.90e-19!115;UBERON:0002204!8.40e-17!167;UBERON:0001737!4.85e-11!9;UBERON:0003081!1.92e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.19e-38,76;UBERON:0004765,1.82e-34,90;UBERON:0001474,1.99e-34,82;UBERON:0001434,5.73e-30,100;UBERON:0002405,3.58e-29,93;UBERON:0002390,3.56e-27,98;UBERON:0003061,3.56e-27,98;UBERON:0002193,9.76e-24,108;UBERON:0002204,1.82e-21,167;UBERON:0003081,2.00e-17,203;UBERON:0002384,6.96e-10,371;UBERON:0000926,1.46e-09,315;UBERON:0004120,1.46e-09,315;UBERON:0006603,1.46e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,1.80808358407193,1.46062018077475,1.95173119516203,0,0,0.313454721478088,0,0,0,0,0,0,0,0,2.32224184974114,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0.726991193897824,2.26725566213286,0.970336244751265,2.09186133215116,2.05583944010913,2.47765096716083,1.43846196161075,1.0246428261164,4.02019790810595,0.689491361473237,8.39130088658974,5.41705946377367,1.50593871634084,3.82068610080984,4.26974620445661,3.36692281607993,1.28371610830437,5.11469700639233,0.329851300186716,1.19678194572979,2.13112375266347,3.77272010217159,8.5107783703671,6.22822248995575,3.26623264833766,3.65038042894141,3.25783267057675,1.81619850790011,4.05105399586321,4.43047342417238,1.47878700418359,1.91343869968539,2.72556239160889,0.673971786878971,0.600707571366025,1.12507910687956,0,1.79025009479181,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.222820913770347,1.17842362989935,0.886135578334485,0.812411591295047,0.128091319725675,0,0.164437904603676,0,0,0,0,0,1.0197840842781,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19656404608826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04541115870403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0.506328996723799,0,0,0,1.93975268182574,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.674338760312407,1.92808823906786,0.441175890929576,0.653638332277218,0.474541238222193,0.404493924480493,0.588664395376038,3.07797725557112,0,0,0,0,0,0,0,0,0,2.57351715447788,0,0,0,0,0,0,0,2.43453850447661,1.40890433082986,0,0.925971025153221,0.761016608938393,0,0,0,0,0,0,2.51973192298289,1.84307626415102,0,0,0,0,0,0.207328115540772,1.44119953416961,0.37872730027914,0.952468414382536,0,0,0,0.308482478109971,2.10240140490742,3.42991719156694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.01354254859276,6.32501818449095,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.831883446123229,0.713715955188647,0.788512075169673,1.28855556491985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52463103837025,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0,1.43411352204052,1.67023369722306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,1.67121139316383,1.18785872333055,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0,0,0,0,0,0,0,0,0,0,0,0,2.55200927785536,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,2.0247650239635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0.899606224327209,0,3.31764966272684,0.265841714557995,1.5652351854352,0,3.04644169735036,0,0,0,3.71227007902795,1.99047944349308,0,3.77735275701072,6.39824028655246,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,4.67664741214532,2.25870228532717,1.4720885483026,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5510319283216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:86998558..86998561,+ | |||
}} |
Revision as of 14:44, 10 September 2013
Short description: | p@chr10:86998558..86998561, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:86998558..86998561, + |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.19e-38 | 76 |
skeletal element | 1.82e-34 | 90 |
bone element | 1.99e-34 | 82 |
skeletal system | 5.73e-30 | 100 |
immune system | 3.58e-29 | 93 |
hematopoietic system | 3.56e-27 | 98 |
blood island | 3.56e-27 | 98 |
hemolymphoid system | 9.76e-24 | 108 |
musculoskeletal system | 1.82e-21 | 167 |
lateral plate mesoderm | 2.00e-17 | 203 |
connective tissue | 6.96e-10 | 371 |
mesoderm | 1.46e-09 | 315 |
mesoderm-derived structure | 1.46e-09 | 315 |
presumptive mesoderm | 1.46e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.