FFCP PHASE1:Hg19::chr10:104556407..104556425,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C92|description=CAGE_peak_at_chr10:104556407..104556425,+|id=chr10:104556407..104556425,+|ontology_enrichment_celltype=CL:0000766!3.37e-53!76;CL:0002057!2.75e-51!42;CL:0000860!7.69e-47!45;CL:0000839!2.28e-45!70;CL:0000557!1.79e-44!71;CL:0002194!8.23e-42!63;CL:0000576!8.23e-42!63;CL:0000040!8.23e-42!63;CL:0000559!8.23e-42!63;CL:0002009!5.10e-40!65;CL:0000763!1.47e-38!112;CL:0000049!1.47e-38!112;CL:0000738!8.30e-30!140;CL:0000037!2.07e-26!172;CL:0000566!2.07e-26!172;CL:0002032!1.88e-24!165;CL:0000837!1.88e-24!165;CL:0000988!1.06e-23!182;CL:0002031!1.81e-23!124;CL:0002087!7.21e-23!119;CL:0002393!2.65e-13!9;CL:0002397!2.65e-13!9;CL:0002320!1.39e-08!365;CL:0000134!2.46e-08!358;CL:0000094!6.86e-07!8;CL:0002274!6.87e-07!5;CL:0000457!6.87e-07!5;CL:0002191!6.87e-07!5;CL:0000097!6.87e-07!5;CL:0000831!6.87e-07!5;CL:0002028!6.87e-07!5|ontology_enrichment_celltype_v019=CL:0000860;5.23e-66;33!CL:0002057;5.23e-66;33!CL:0000473;4.97e-54;39!CL:0000234;4.97e-54;39!CL:0000576;8.95e-52;48!CL:0000766;4.85e-43;69!CL:0000763;2.08e-18;100!CL:0000875;5.99e-15;3!CL:0002396;5.99e-15;3!CL:0000094;7.50e-14;8!CL:0002087;4.54e-12;104!CL:0000738;5.64e-12;136!CL:0000081;5.36e-10;11!CL:0002393;8.64e-08;6!CL:0002397;8.64e-08;6!CL:0000775;6.56e-07;3!CL:0000767;8.29e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,1.77e-89,42;CL:0002057,1.77e-89,42;CL:0000473,2.55e-88,48;CL:0000234,2.55e-88,48;CL:0000766,6.53e-85,72;CL:0002194,9.66e-74,59;CL:0000576,9.66e-74,59;CL:0000040,9.66e-74,59;CL:0000559,9.66e-74,59;CL:0002009,4.01e-71,61;CL:0000839,1.99e-69,66;CL:0000557,2.70e-68,67;CL:0000763,3.45e-54,108;CL:0000049,3.45e-54,108;CL:0000738,1.92e-41,136;CL:0002031,4.77e-35,120;CL:0002087,1.55e-34,115;CL:0002032,8.87e-34,161;CL:0000837,8.87e-34,161;CL:0000037,4.88e-32,168;CL:0000988,5.31e-30,177;CL:0002393,1.09e-18,9;CL:0002397,1.09e-18,9;CL:0000875,6.43e-15,3;CL:0002396,6.43e-15,3;CL:0000094,8.26e-14,8;CL:0000134,6.83e-11,354;CL:0002320,1.61e-10,361;CL:0000081,5.75e-10,11;CL:0000219,3.29e-09,386;CL:0000048,2.68e-08,427;CL:0000723,4.57e-08,433;CL:0000034,9.13e-08,441;CL:0000775,5.83e-07,3|ontology_enrichment_development_v019=CL:0002057;2.89e-64;42!CL:0000049;1.52e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.17e-44!102;UBERON:0003061!1.17e-44!102;UBERON:0002193!1.03e-42!112;UBERON:0002371!6.49e-41!80;UBERON:0001474!2.15e-38!86;UBERON:0004765!2.21e-35!101;UBERON:0001434!2.21e-35!101;UBERON:0002405!1.59e-29!115;UBERON:0003081!1.96e-18!216;UBERON:0002204!5.29e-18!167;UBERON:0007023!9.40e-10!115;UBERON:0002384!3.48e-08!375;UBERON:0000926!3.37e-07!448;UBERON:0004120!3.37e-07!448;UBERON:0006603!3.37e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.99e-59,76;UBERON:0001474,1.39e-54,82;UBERON:0002390,1.19e-50,98;UBERON:0003061,1.19e-50,98;UBERON:0004765,4.09e-49,90;UBERON:0002405,2.64e-47,93;UBERON:0002193,2.79e-45,108;UBERON:0001434,1.69e-43,100;UBERON:0002204,2.02e-26,167;UBERON:0003081,2.00e-23,203;UBERON:0000926,3.68e-14,315;UBERON:0004120,3.68e-14,315;UBERON:0006603,3.68e-14,315;UBERON:0002384,5.18e-10,371|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,3.54027849164014,0.383829398097213,1.08371286321253,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,1.34349284543955,0.971680998056939,0.515151135268373,2.18097358169347,4.1566353805769,4.12392904019288,2.09186133215116,2.46700732813095,5.26500830521676,0.28769239232215,1.2808035326455,0.236482229888585,3.10271112662957,2.5819387343353,1.35426486594342,3.76484679085209,2.45615535052061,5.8428105955722,2.14258724659632,4.8139354061414,1.91801137739712,0,0.997318288108159,0,0.580418477257168,1.70215567407342,0.622822248995575,0.251248665256743,1.0429658368404,1.73751075764093,0.605399502633369,1.47311054395026,2.21523671208619,6.33765858935825,6.16552469898626,5.87044207423452,1.68492946719743,1.65194582125657,1.12507910687956,5.13022938734247,5.76858363877361,4.20127553658658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.434539556882471,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr10:104556407..104556425,+ | |||
|id=chr10:104556407..104556425,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.37e-53!76;CL:0002057!2.75e-51!42;CL:0000860!7.69e-47!45;CL:0000839!2.28e-45!70;CL:0000557!1.79e-44!71;CL:0002194!8.23e-42!63;CL:0000576!8.23e-42!63;CL:0000040!8.23e-42!63;CL:0000559!8.23e-42!63;CL:0002009!5.10e-40!65;CL:0000763!1.47e-38!112;CL:0000049!1.47e-38!112;CL:0000738!8.30e-30!140;CL:0000037!2.07e-26!172;CL:0000566!2.07e-26!172;CL:0002032!1.88e-24!165;CL:0000837!1.88e-24!165;CL:0000988!1.06e-23!182;CL:0002031!1.81e-23!124;CL:0002087!7.21e-23!119;CL:0002393!2.65e-13!9;CL:0002397!2.65e-13!9;CL:0002320!1.39e-08!365;CL:0000134!2.46e-08!358;CL:0000094!6.86e-07!8;CL:0002274!6.87e-07!5;CL:0000457!6.87e-07!5;CL:0002191!6.87e-07!5;CL:0000097!6.87e-07!5;CL:0000831!6.87e-07!5;CL:0002028!6.87e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.23e-66;33!CL:0002057;5.23e-66;33!CL:0000473;4.97e-54;39!CL:0000234;4.97e-54;39!CL:0000576;8.95e-52;48!CL:0000766;4.85e-43;69!CL:0000763;2.08e-18;100!CL:0000875;5.99e-15;3!CL:0002396;5.99e-15;3!CL:0000094;7.50e-14;8!CL:0002087;4.54e-12;104!CL:0000738;5.64e-12;136!CL:0000081;5.36e-10;11!CL:0002393;8.64e-08;6!CL:0002397;8.64e-08;6!CL:0000775;6.56e-07;3!CL:0000767;8.29e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.77e-89,42;CL:0002057,1.77e-89,42;CL:0000473,2.55e-88,48;CL:0000234,2.55e-88,48;CL:0000766,6.53e-85,72;CL:0002194,9.66e-74,59;CL:0000576,9.66e-74,59;CL:0000040,9.66e-74,59;CL:0000559,9.66e-74,59;CL:0002009,4.01e-71,61;CL:0000839,1.99e-69,66;CL:0000557,2.70e-68,67;CL:0000763,3.45e-54,108;CL:0000049,3.45e-54,108;CL:0000738,1.92e-41,136;CL:0002031,4.77e-35,120;CL:0002087,1.55e-34,115;CL:0002032,8.87e-34,161;CL:0000837,8.87e-34,161;CL:0000037,4.88e-32,168;CL:0000988,5.31e-30,177;CL:0002393,1.09e-18,9;CL:0002397,1.09e-18,9;CL:0000875,6.43e-15,3;CL:0002396,6.43e-15,3;CL:0000094,8.26e-14,8;CL:0000134,6.83e-11,354;CL:0002320,1.61e-10,361;CL:0000081,5.75e-10,11;CL:0000219,3.29e-09,386;CL:0000048,2.68e-08,427;CL:0000723,4.57e-08,433;CL:0000034,9.13e-08,441;CL:0000775,5.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.89e-64;42!CL:0000049;1.52e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-44!102;UBERON:0003061!1.17e-44!102;UBERON:0002193!1.03e-42!112;UBERON:0002371!6.49e-41!80;UBERON:0001474!2.15e-38!86;UBERON:0004765!2.21e-35!101;UBERON:0001434!2.21e-35!101;UBERON:0002405!1.59e-29!115;UBERON:0003081!1.96e-18!216;UBERON:0002204!5.29e-18!167;UBERON:0007023!9.40e-10!115;UBERON:0002384!3.48e-08!375;UBERON:0000926!3.37e-07!448;UBERON:0004120!3.37e-07!448;UBERON:0006603!3.37e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.99e-59,76;UBERON:0001474,1.39e-54,82;UBERON:0002390,1.19e-50,98;UBERON:0003061,1.19e-50,98;UBERON:0004765,4.09e-49,90;UBERON:0002405,2.64e-47,93;UBERON:0002193,2.79e-45,108;UBERON:0001434,1.69e-43,100;UBERON:0002204,2.02e-26,167;UBERON:0003081,2.00e-23,203;UBERON:0000926,3.68e-14,315;UBERON:0004120,3.68e-14,315;UBERON:0006603,3.68e-14,315;UBERON:0002384,5.18e-10,371 | |||
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|short_description=p@chr10:104556407..104556425,+ | |||
}} |
Revision as of 11:28, 10 September 2013
Short description: | p@chr10:104556407..104556425, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:104556407..104556425, + |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.99e-59 | 76 |
bone element | 1.39e-54 | 82 |
hematopoietic system | 1.19e-50 | 98 |
blood island | 1.19e-50 | 98 |
skeletal element | 4.09e-49 | 90 |
immune system | 2.64e-47 | 93 |
hemolymphoid system | 2.79e-45 | 108 |
skeletal system | 1.69e-43 | 100 |
musculoskeletal system | 2.02e-26 | 167 |
lateral plate mesoderm | 2.00e-23 | 203 |
mesoderm | 3.68e-14 | 315 |
mesoderm-derived structure | 3.68e-14 | 315 |
presumptive mesoderm | 3.68e-14 | 315 |
connective tissue | 5.18e-10 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.