FFCP PHASE1:Hg19::chr11:7695437..7695514,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51700|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24376|TSSclassifier=S|UniProt=E9PIV9,E9PMI2|association_with_transcript=0bp_to_ENST00000525307,ENST00000527542,ENST00000531096,ENST00000533558_5end|description=CAGE_peak_2_at_CYB5R2_5end|id=chr11:7695437..7695514,-|ontology_enrichment_celltype=CL:0000055!5.81e-12!180;CL:0000393!1.16e-08!60;CL:0000211!1.16e-08!60;CL:0000057!3.74e-08!75;CL:0002159!4.14e-08!13;CL:0000183!4.28e-08!59;CL:0000187!6.14e-08!54;CL:0000680!2.62e-07!57;CL:0000056!2.62e-07!57;CL:0000355!2.62e-07!57|ontology_enrichment_celltype_v019=CL:0002159;5.87e-09;14|ontology_enrichment_celltype_v019_2=CL:0002159,6.14e-09,14;CL:0000393,8.65e-09,61;CL:0000211,8.65e-09,61;CL:0000057,9.62e-09,76;CL:0000187,5.93e-08,55;CL:0000680,2.17e-07,58;CL:0000056,2.17e-07,58;CL:0000355,2.17e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!5.29e-12!365;UBERON:0000486!9.64e-12!82;UBERON:0000119!2.76e-11!312;UBERON:0000914!4.58e-11!83;UBERON:0002329!4.58e-11!83;UBERON:0003077!4.58e-11!83;UBERON:0003059!4.58e-11!83;UBERON:0007282!4.58e-11!83;UBERON:0009618!4.58e-11!83;UBERON:0007285!4.58e-11!83;UBERON:0000483!9.30e-11!309;UBERON:0000922!5.45e-10!612;UBERON:0000468!6.36e-10!659;UBERON:0004121!1.27e-09!169;UBERON:0004290!1.70e-09!70;UBERON:0000481!2.14e-09!347;UBERON:0000924!1.87e-08!173;UBERON:0006601!1.87e-08!173;UBERON:0002050!3.24e-08!605;UBERON:0005423!3.24e-08!605;UBERON:0000064!4.45e-08!219;UBERON:0000923!5.29e-08!604;UBERON:0005291!5.29e-08!604;UBERON:0006598!5.29e-08!604;UBERON:0002532!5.29e-08!604;UBERON:0000480!1.27e-07!626;UBERON:0000467!1.29e-07!625;UBERON:0005256!1.43e-07!143;UBERON:0003102!2.40e-07!95;UBERON:0000033!4.30e-07!123;UBERON:0001134!9.35e-07!61;UBERON:0002036!9.35e-07!61;UBERON:0003082!9.35e-07!61|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.66e-12,132;UBERON:0000486,5.56e-12,83;UBERON:0000119,9.16e-11,309;UBERON:0000483,3.10e-10,306;UBERON:0002329,9.48e-10,71;UBERON:0003059,9.48e-10,71;UBERON:0007282,9.48e-10,71;UBERON:0004290,9.48e-10,71;UBERON:0009618,9.48e-10,71;UBERON:0003077,1.03e-09,72;UBERON:0007285,1.03e-09,72;UBERON:0004121,1.08e-09,171;UBERON:0000924,1.08e-09,171;UBERON:0006601,1.08e-09,171;UBERON:0007524,2.75e-09,73;UBERON:0003102,4.94e-09,99;UBERON:0007503,8.62e-09,78;UBERON:0010371,1.31e-08,104;UBERON:0000922,6.28e-08,592;UBERON:0000033,1.60e-07,56;UBERON:0005423,5.50e-07,581;UBERON:0001134,6.80e-07,62;UBERON:0002036,6.80e-07,62;UBERON:0003082,6.80e-07,62;UBERON:0004923,7.70e-07,66;UBERON:0002050,9.79e-07,564;UBERON:0002385,9.88e-07,64;UBERON:0001015,9.88e-07,64;UBERON:0000383,9.88e-07,64|phase1_expression=1.81678379270557,2.14100523890983,1.83240725324762,1.0007329835313,0.893922188854576,2.61701557230111,0,3.15859936713415,2.61185628199839,14.006834380586,26.5164443829522,11.1405099786388,13.4521158896511,0.37129905888014,0,0.672325146451775,0,0,0,3.0780264519197,2.85600967741954,0.626909442956176,8.01460763966959,17.7936752594749,11.5499228427219,1.75750833220288,0.985207073399349,0.865818594450472,0.786728553697808,0,0.309632246632152,22.0661093874943,13.8554722637995,9.61360426433648,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0.709446689665756,1.03423704220986,0,0,0.188242339542605,0.545812300115692,0,1.53041946185451,2.56743221660875,3.83602275479425,0,0.199463657621632,0,2.03146467040009,1.70215567407342,5.60540024096017,0.251248665256743,0,0.217188844705117,1.81619850790011,5.89244217580104,4.43047342417238,0,0.425208599930087,0.419317291016752,0.44931452458598,0.150176892841506,0.48217676009124,0,0.19891667719909,0,0,0,0,0.426730222566507,1.20118796110804,0.574752439954483,0,0,0,1.17447437874188,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,11.4019146149618,9.20610445273418,6.86734389530676,5.51471701699479,3.18662341713812,2.3858578411533,5.83961844363163,2.3633704291017,2.4390233720882,2.0202000709419,10.7402841908124,45.1726157482752,37.4492287212274,0,0,0,0,0,0,0.993812036833525,1.72046919021225,0.347140501607594,0,0,1.10047216776027,0.835979866147242,0,0.35576626268671,0,0.402829317109147,0,0,1.10298924103761,3.24056779152704,4.46498641420399,8.75664553242062,5.85579698513276,3.06633274931766,1.89853131913626,1.46561395144326,0,0,13.5189156164186,2.98183171017191,2.5326102332916,0.529636723252875,1.43418310374407,2.4826786753885,5.04609840128076,8.5399196583764,0.24666754841716,6.84664277879486,5.92726957106628,12.2596427335094,1.36221684880438,2.30470369792,31.6333932975625,5.93104145977609,11.409436430889,10.4614076386261,16.0885263141958,15.7016756037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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24376 | |||
|TSSclassifier=S | |||
|UniProt=E9PIV9,E9PMI2 | |||
|association_with_transcript=0bp_to_ENST00000525307,ENST00000527542,ENST00000531096,ENST00000533558_5end | |||
|description=CAGE_peak_2_at_CYB5R2_5end | |||
|id=chr11:7695437..7695514,- | |||
|ontology_enrichment_celltype=CL:0000055!5.81e-12!180;CL:0000393!1.16e-08!60;CL:0000211!1.16e-08!60;CL:0000057!3.74e-08!75;CL:0002159!4.14e-08!13;CL:0000183!4.28e-08!59;CL:0000187!6.14e-08!54;CL:0000680!2.62e-07!57;CL:0000056!2.62e-07!57;CL:0000355!2.62e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.87e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,6.14e-09,14;CL:0000393,8.65e-09,61;CL:0000211,8.65e-09,61;CL:0000057,9.62e-09,76;CL:0000187,5.93e-08,55;CL:0000680,2.17e-07,58;CL:0000056,2.17e-07,58;CL:0000355,2.17e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.29e-12!365;UBERON:0000486!9.64e-12!82;UBERON:0000119!2.76e-11!312;UBERON:0000914!4.58e-11!83;UBERON:0002329!4.58e-11!83;UBERON:0003077!4.58e-11!83;UBERON:0003059!4.58e-11!83;UBERON:0007282!4.58e-11!83;UBERON:0009618!4.58e-11!83;UBERON:0007285!4.58e-11!83;UBERON:0000483!9.30e-11!309;UBERON:0000922!5.45e-10!612;UBERON:0000468!6.36e-10!659;UBERON:0004121!1.27e-09!169;UBERON:0004290!1.70e-09!70;UBERON:0000481!2.14e-09!347;UBERON:0000924!1.87e-08!173;UBERON:0006601!1.87e-08!173;UBERON:0002050!3.24e-08!605;UBERON:0005423!3.24e-08!605;UBERON:0000064!4.45e-08!219;UBERON:0000923!5.29e-08!604;UBERON:0005291!5.29e-08!604;UBERON:0006598!5.29e-08!604;UBERON:0002532!5.29e-08!604;UBERON:0000480!1.27e-07!626;UBERON:0000467!1.29e-07!625;UBERON:0005256!1.43e-07!143;UBERON:0003102!2.40e-07!95;UBERON:0000033!4.30e-07!123;UBERON:0001134!9.35e-07!61;UBERON:0002036!9.35e-07!61;UBERON:0003082!9.35e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.66e-12,132;UBERON:0000486,5.56e-12,83;UBERON:0000119,9.16e-11,309;UBERON:0000483,3.10e-10,306;UBERON:0002329,9.48e-10,71;UBERON:0003059,9.48e-10,71;UBERON:0007282,9.48e-10,71;UBERON:0004290,9.48e-10,71;UBERON:0009618,9.48e-10,71;UBERON:0003077,1.03e-09,72;UBERON:0007285,1.03e-09,72;UBERON:0004121,1.08e-09,171;UBERON:0000924,1.08e-09,171;UBERON:0006601,1.08e-09,171;UBERON:0007524,2.75e-09,73;UBERON:0003102,4.94e-09,99;UBERON:0007503,8.62e-09,78;UBERON:0010371,1.31e-08,104;UBERON:0000922,6.28e-08,592;UBERON:0000033,1.60e-07,56;UBERON:0005423,5.50e-07,581;UBERON:0001134,6.80e-07,62;UBERON:0002036,6.80e-07,62;UBERON:0003082,6.80e-07,62;UBERON:0004923,7.70e-07,66;UBERON:0002050,9.79e-07,564;UBERON:0002385,9.88e-07,64;UBERON:0001015,9.88e-07,64;UBERON:0000383,9.88e-07,64 | |||
|phase1_expression=1.81678379270557,2.14100523890983,1.83240725324762,1.0007329835313,0.893922188854576,2.61701557230111,0,3.15859936713415,2.61185628199839,14.006834380586,26.5164443829522,11.1405099786388,13.4521158896511,0.37129905888014,0,0.672325146451775,0,0,0,3.0780264519197,2.85600967741954,0.626909442956176,8.01460763966959,17.7936752594749,11.5499228427219,1.75750833220288,0.985207073399349,0.865818594450472,0.786728553697808,0,0.309632246632152,22.0661093874943,13.8554722637995,9.61360426433648,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0.709446689665756,1.03423704220986,0,0,0.188242339542605,0.545812300115692,0,1.53041946185451,2.56743221660875,3.83602275479425,0,0.199463657621632,0,2.03146467040009,1.70215567407342,5.60540024096017,0.251248665256743,0,0.217188844705117,1.81619850790011,5.89244217580104,4.43047342417238,0,0.425208599930087,0.419317291016752,0.44931452458598,0.150176892841506,0.48217676009124,0,0.19891667719909,0,0,0,0,0.426730222566507,1.20118796110804,0.574752439954483,0,0,0,1.17447437874188,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,11.4019146149618,9.20610445273418,6.86734389530676,5.51471701699479,3.18662341713812,2.3858578411533,5.83961844363163,2.3633704291017,2.4390233720882,2.0202000709419,10.7402841908124,45.1726157482752,37.4492287212274,0,0,0,0,0,0,0.993812036833525,1.72046919021225,0.347140501607594,0,0,1.10047216776027,0.835979866147242,0,0.35576626268671,0,0.402829317109147,0,0,1.10298924103761,3.24056779152704,4.46498641420399,8.75664553242062,5.85579698513276,3.06633274931766,1.89853131913626,1.46561395144326,0,0,13.5189156164186,2.98183171017191,2.5326102332916,0.529636723252875,1.43418310374407,2.4826786753885,5.04609840128076,8.5399196583764,0.24666754841716,6.84664277879486,5.92726957106628,12.2596427335094,1.36221684880438,2.30470369792,31.6333932975625,5.93104145977609,11.409436430889,10.4614076386261,16.0885263141958,15.7016756037088,16.4327443841631,7.75785850768594,17.0739701063357,4.44300859055791,5.94001428641027,4.20353779773547,20.9337113245746,8.62341770179486,15.150250255866,11.3857853083487,8.58898758000967,6.58466431321257,3.0648779579902,6.91095070970345,5.78504134116107,3.40840307808838,2.77624605464138,1.90738711043606,2.70081986475962,2.37020817248409,2.31876486041066,2.97786970130544,1.18143432568886,2.04617710838517,1.26216887122057,2.30124746605748,4.0411514204703,0,1.0075209822764,13.225726200218,17.0069550783701,16.9102594766317,12.9062067925052,20.7355300420312,25.8433048226896,22.4254309738171,12.6466487118752,17.4101387104184,2.18986415445498,7.8224766164908,4.5026865673502,17.9575397758225,10.6804623447355,12.271951188383,0,0,0,0,0,0,0,0,0,0,7.01208869017229,17.2861084759188,11.7606969108434,0,0,0.590789906681404,0,0,6.51957679134397,19.5355508027354,21.3563331189477,15.1798748341563,16.4807432382183,14.3355654336543,27.038304417269,0,4.40535538905292,0.70445216541493,0.288732895522148,0,0,0,0,0,0.234004265139238,1.18904929830983,21.5587818169587,5.03946384596579,19.9902887111765,0,0,0,0,0,0.829312462163088,1.58531948758658,0.37872730027914,0.444485260045183,0,0,0,1.13110241973656,0,0,9.53114216935566,5.23152082599936,5.50037143657125,3.74887975697556,7.15312891703765,17.751357803676,3.19125739901845,2.08014873822732,21.6054194380199,19.858878483259,17.8502859940787,4.71827379071887,6.51145926469732,26.3436907769846,16.9382815832742,5.33087923113819,26.1344118068032,8.13886318060882,8.71533458600294,8.19778527692868,0,1.00451418286425,2.10833939483032,0.239624855491583,2.29723871668228,2.85273810081437,0,1.02738161275192,2.86497541183833,0,0,0,0,1.01637849688985,0,0,3.68535783735567,1.27587750330633,0,0,0.414415513436035,0.49076596687656,0.500170521059677,2.98391526069709,3.11956292296211,1.60586089917446,2.20783381047509,1.52283839490527,3.31040709700491,0,6.2083842775503,2.65690239414175,2.02806085395873,22.9372742195739,4.89502893656851,3.77457766191941,0,1.2942852049117,0.106727557803444,16.6720164295443,11.6504807657348,12.0956117331872,1.98486246255021,5.98501695823444,7.01650236082684,1.92208723883551,4.09365799253363,2.41280881715411,0,15.8835984616735,8.5229628150301,11.6620561539609,6.23105315020345,14.5262973074949,0,2.20557117333613,5.0644543914743,3.55924789310281,1.0925470080403,1.31124414959424,13.5359883872224,6.85436500229291,6.27479815341484,2.92278449306521,2.21658420675039,0,0.340187410553031,0.431831832204279,0,5.68987518842091,3.01013864312912,5.60727800699084,9.97291210714469,7.83561641527624,0,0,15.6434576320997,10.1684540166909,12.0390006025792,1.03041011647722,0.0915694648183434,0,14.9309039879005,19.5018073810956,0,3.57681657680851,12.6319866034008,13.5083233758994,14.3350035383912,12.568168649588,14.7917027792513,9.8010621528516,2.1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| |||
|short_description=p2@CYB5R2 | |||
}} |
Revision as of 19:47, 10 September 2013
Short description: | p2@CYB5R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CYB5R2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525307, ENST00000527542, ENST00000531096, ENST00000533558_5end |
EntrezGene: | CYB5R2 |
HGNC: | 24376 |
UniProt: | E9PIV9E9PMI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 6.14e-09 | 14 |
electrically responsive cell | 8.65e-09 | 61 |
electrically active cell | 8.65e-09 | 61 |
fibroblast | 9.62e-09 | 76 |
muscle cell | 5.93e-08 | 55 |
muscle precursor cell | 2.17e-07 | 58 |
myoblast | 2.17e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.17e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.66e-12 | 132 |
multilaminar epithelium | 5.56e-12 | 83 |
cell layer | 9.16e-11 | 309 |
epithelium | 3.10e-10 | 306 |
somite | 9.48e-10 | 71 |
presomitic mesoderm | 9.48e-10 | 71 |
presumptive segmental plate | 9.48e-10 | 71 |
dermomyotome | 9.48e-10 | 71 |
trunk paraxial mesoderm | 9.48e-10 | 71 |
paraxial mesoderm | 1.03e-09 | 72 |
presumptive paraxial mesoderm | 1.03e-09 | 72 |
ectoderm-derived structure | 1.08e-09 | 171 |
ectoderm | 1.08e-09 | 171 |
presumptive ectoderm | 1.08e-09 | 171 |
dense mesenchyme tissue | 2.75e-09 | 73 |
surface structure | 4.94e-09 | 99 |
epithelial vesicle | 8.62e-09 | 78 |
ecto-epithelium | 1.31e-08 | 104 |
embryo | 6.28e-08 | 592 |
head | 1.60e-07 | 56 |
developing anatomical structure | 5.50e-07 | 581 |
skeletal muscle tissue | 6.80e-07 | 62 |
striated muscle tissue | 6.80e-07 | 62 |
myotome | 6.80e-07 | 62 |
organ component layer | 7.70e-07 | 66 |
embryonic structure | 9.79e-07 | 564 |
muscle tissue | 9.88e-07 | 64 |
musculature | 9.88e-07 | 64 |
musculature of body | 9.88e-07 | 64 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.