FFCP PHASE1:Hg19::chr11:8273650..8273655,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:8273650..8273655,-|id=chr11:8273650..8273655,-|ontology_enrichment_celltype=CL:0000242!5.93e-10!2;CL:0002322!3.45e-08!5;CL:0000333!7.38e-07!41|ontology_enrichment_celltype_v019=CL:0000333;2.97e-09;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;2.86e-53;3!UBERON:0006238;2.02e-15;10!UBERON:0006601;4.72e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;6.33e-08;6|ontology_enrichment_disease_v019_2=DOID:169,5.92e-08,6|ontology_enrichment_uberon=UBERON:0000073!1.57e-14!94;UBERON:0001016!1.57e-14!94;UBERON:0000955!2.05e-13!69;UBERON:0006238!2.05e-13!69;UBERON:0005743!5.00e-13!86;UBERON:0001017!3.58e-12!82;UBERON:0001049!4.36e-11!57;UBERON:0005068!4.36e-11!57;UBERON:0006241!4.36e-11!57;UBERON:0007135!4.36e-11!57;UBERON:0002616!1.28e-10!59;UBERON:0003075!3.86e-10!86;UBERON:0007284!3.86e-10!86;UBERON:0002346!1.57e-09!90;UBERON:0002780!3.10e-08!41;UBERON:0001890!3.10e-08!41;UBERON:0006240!3.10e-08!41;UBERON:0001893!3.61e-08!34;UBERON:0000349!5.14e-08!5;UBERON:0003080!5.30e-08!42;UBERON:0000033!5.64e-08!123;UBERON:0004121!7.23e-08!169;UBERON:0000924!1.42e-07!173;UBERON:0006601!1.42e-07!173;UBERON:0003056!1.56e-07!61;UBERON:0000153!2.01e-07!129;UBERON:0007811!2.01e-07!129;UBERON:0001869!6.24e-07!32;UBERON:0002791!9.92e-07!33|ontology_enrichment_uberon_v019=UBERON:0000966;1.69e-32;5!UBERON:0005388;1.69e-32;5!UBERON:0001802;1.69e-32;5!UBERON:0001905;4.66e-21;2!UBERON:0002757;4.66e-21;2!UBERON:0010134;4.66e-21;2!UBERON:0005408;4.66e-21;2!UBERON:0001899;4.66e-21;2!UBERON:0003296;3.10e-11;4!UBERON:0010133;3.10e-11;4!UBERON:0002784;3.10e-11;4!UBERON:0000019;2.26e-09;19!UBERON:0000047;2.26e-09;19!UBERON:0004088;2.26e-09;19!UBERON:0010230;2.26e-09;19!UBERON:0000013;2.97e-09;5!UBERON:0002410;2.97e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0001456;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24!UBERON:0001894;5.70e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000966,3.55e-27,6;UBERON:0005388,3.55e-27,6;UBERON:0001802,3.55e-27,6;UBERON:0001905,5.70e-21,2;UBERON:0002757,5.70e-21,2;UBERON:0010134,5.70e-21,2;UBERON:0005408,5.70e-21,2;UBERON:0001899,5.70e-21,2;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0002784,3.42e-11,4;UBERON:0000013,2.74e-09,5;UBERON:0002410,2.74e-09,5;UBERON:0000019,6.42e-09,20;UBERON:0000047,6.42e-09,20;UBERON:0010312,6.42e-09,20;UBERON:0004088,6.42e-09,20;UBERON:0010230,6.42e-09,20;UBERON:0003072,6.42e-09,20;UBERON:0004128,6.42e-09,20;UBERON:0003071,6.42e-09,20;UBERON:0000970,1.53e-08,21;UBERON:0002104,1.53e-08,21;UBERON:0001456,3.39e-08,22;UBERON:0000020,1.36e-07,24;UBERON:0001032,1.36e-07,24;UBERON:0004456,1.36e-07,24;UBERON:0001016,1.45e-07,89;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0,0,0,0,0.0633107959558787,0.586654148204409,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.276697269872462,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:8273650..8273655,- | |||
|id=chr11:8273650..8273655,- | |||
|ontology_enrichment_celltype=CL:0000242!5.93e-10!2;CL:0002322!3.45e-08!5;CL:0000333!7.38e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.97e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.86e-53;3!UBERON:0006238;2.02e-15;10!UBERON:0006601;4.72e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;6.33e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.57e-14!94;UBERON:0001016!1.57e-14!94;UBERON:0000955!2.05e-13!69;UBERON:0006238!2.05e-13!69;UBERON:0005743!5.00e-13!86;UBERON:0001017!3.58e-12!82;UBERON:0001049!4.36e-11!57;UBERON:0005068!4.36e-11!57;UBERON:0006241!4.36e-11!57;UBERON:0007135!4.36e-11!57;UBERON:0002616!1.28e-10!59;UBERON:0003075!3.86e-10!86;UBERON:0007284!3.86e-10!86;UBERON:0002346!1.57e-09!90;UBERON:0002780!3.10e-08!41;UBERON:0001890!3.10e-08!41;UBERON:0006240!3.10e-08!41;UBERON:0001893!3.61e-08!34;UBERON:0000349!5.14e-08!5;UBERON:0003080!5.30e-08!42;UBERON:0000033!5.64e-08!123;UBERON:0004121!7.23e-08!169;UBERON:0000924!1.42e-07!173;UBERON:0006601!1.42e-07!173;UBERON:0003056!1.56e-07!61;UBERON:0000153!2.01e-07!129;UBERON:0007811!2.01e-07!129;UBERON:0001869!6.24e-07!32;UBERON:0002791!9.92e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.69e-32;5!UBERON:0005388;1.69e-32;5!UBERON:0001802;1.69e-32;5!UBERON:0001905;4.66e-21;2!UBERON:0002757;4.66e-21;2!UBERON:0010134;4.66e-21;2!UBERON:0005408;4.66e-21;2!UBERON:0001899;4.66e-21;2!UBERON:0003296;3.10e-11;4!UBERON:0010133;3.10e-11;4!UBERON:0002784;3.10e-11;4!UBERON:0000019;2.26e-09;19!UBERON:0000047;2.26e-09;19!UBERON:0004088;2.26e-09;19!UBERON:0010230;2.26e-09;19!UBERON:0000013;2.97e-09;5!UBERON:0002410;2.97e-09;5!UBERON:0000970;5.93e-09;20!UBERON:0002104;1.42e-08;21!UBERON:0001456;1.42e-08;21!UBERON:0000020;6.52e-08;23!UBERON:0001032;1.27e-07;24!UBERON:0004456;1.27e-07;24!UBERON:0001894;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,3.55e-27,6;UBERON:0005388,3.55e-27,6;UBERON:0001802,3.55e-27,6;UBERON:0001905,5.70e-21,2;UBERON:0002757,5.70e-21,2;UBERON:0010134,5.70e-21,2;UBERON:0005408,5.70e-21,2;UBERON:0001899,5.70e-21,2;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0002784,3.42e-11,4;UBERON:0000013,2.74e-09,5;UBERON:0002410,2.74e-09,5;UBERON:0000019,6.42e-09,20;UBERON:0000047,6.42e-09,20;UBERON:0010312,6.42e-09,20;UBERON:0004088,6.42e-09,20;UBERON:0010230,6.42e-09,20;UBERON:0003072,6.42e-09,20;UBERON:0004128,6.42e-09,20;UBERON:0003071,6.42e-09,20;UBERON:0000970,1.53e-08,21;UBERON:0002104,1.53e-08,21;UBERON:0001456,3.39e-08,22;UBERON:0000020,1.36e-07,24;UBERON:0001032,1.36e-07,24;UBERON:0004456,1.36e-07,24;UBERON:0001016,1.45e-07,89;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0,0,0,0,0.0633107959558787,0.586654148204409,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.276697269872462,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0.255788742607303,0,0,1.85656384926424,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,1.3451348888753,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,1.1436247068265,1.42212250559454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.439762066981716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0.872701380680755,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:8273650..8273655,- | |||
}} |
Revision as of 19:55, 10 September 2013
Short description: | p@chr11:8273650..8273655, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:8273650..8273655, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 3.55e-27 | 6 |
photoreceptor array | 3.55e-27 | 6 |
posterior segment of eyeball | 3.55e-27 | 6 |
pineal body | 5.70e-21 | 2 |
regional part of epithalamus | 5.70e-21 | 2 |
secretory circumventricular organ | 5.70e-21 | 2 |
circumventricular organ | 5.70e-21 | 2 |
epithalamus | 5.70e-21 | 2 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
regional part of diencephalon | 3.42e-11 | 4 |
sympathetic nervous system | 2.74e-09 | 5 |
autonomic nervous system | 2.74e-09 | 5 |
camera-type eye | 6.42e-09 | 20 |
simple eye | 6.42e-09 | 20 |
immature eye | 6.42e-09 | 20 |
ocular region | 6.42e-09 | 20 |
eyeball of camera-type eye | 6.42e-09 | 20 |
optic cup | 6.42e-09 | 20 |
optic vesicle | 6.42e-09 | 20 |
eye primordium | 6.42e-09 | 20 |
eye | 1.53e-08 | 21 |
visual system | 1.53e-08 | 21 |
face | 3.39e-08 | 22 |
sense organ | 1.36e-07 | 24 |
sensory system | 1.36e-07 | 24 |
entire sense organ system | 1.36e-07 | 24 |
nervous system | 1.45e-07 | 89 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.92e-08 | 6 |
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