FFCP PHASE1:Hg19::chr12:125110878..125110906,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C475|description=CAGE_peak_at_chr12:125110878..125110906,-|id=chr12:125110878..125110906,-|ontology_enrichment_celltype=CL:0000860!3.91e-75!45;CL:0002057!1.10e-71!42;CL:0002194!7.82e-53!63;CL:0000576!7.82e-53!63;CL:0000040!7.82e-53!63;CL:0000559!7.82e-53!63;CL:0002009!9.72e-51!65;CL:0000766!5.70e-48!76;CL:0000839!5.03e-46!70;CL:0000557!3.67e-45!71;CL:0002087!3.42e-34!119;CL:0000738!1.49e-30!140;CL:0002031!1.36e-27!124;CL:0000763!2.12e-27!112;CL:0000049!2.12e-27!112;CL:0000037!1.82e-22!172;CL:0000566!1.82e-22!172;CL:0000988!3.03e-20!182;CL:0002032!8.62e-20!165;CL:0000837!8.62e-20!165;CL:0002393!2.22e-17!9;CL:0002397!2.22e-17!9;CL:0000842!9.36e-07!3|ontology_enrichment_celltype_v019=CL:0000860;7.48e-97;33!CL:0002057;7.48e-97;33!CL:0000576;1.33e-77;48!CL:0000473;1.90e-68;39!CL:0000234;1.90e-68;39!CL:0000766;5.85e-47;69!CL:0002393;5.64e-27;6!CL:0002397;5.64e-27;6!CL:0002087;3.56e-21;104!CL:0000763;2.76e-20;100!CL:0000738;1.41e-14;136!CL:0000226;9.33e-14;3!CL:0000842;9.33e-14;3!CL:0000875;1.21e-13;3!CL:0002396;1.21e-13;3!CL:0000767;1.66e-13;3!CL:0000988;3.80e-08;177|ontology_enrichment_celltype_v019_2=CL:0000860,4.40e-146,42;CL:0002057,4.40e-146,42;CL:0000473,8.70e-127,48;CL:0000234,8.70e-127,48;CL:0002194,9.15e-100,59;CL:0000576,9.15e-100,59;CL:0000040,9.15e-100,59;CL:0000559,9.15e-100,59;CL:0002009,2.81e-96,61;CL:0000766,1.66e-94,72;CL:0000839,1.81e-88,66;CL:0000557,4.80e-87,67;CL:0000763,1.95e-60,108;CL:0000049,1.95e-60,108;CL:0002087,2.71e-59,115;CL:0000738,4.39e-57,136;CL:0002031,8.93e-48,120;CL:0000037,1.39e-44,168;CL:0000988,7.09e-42,177;CL:0002032,7.24e-40,161;CL:0000837,7.24e-40,161;CL:0002393,5.54e-39,9;CL:0002397,5.54e-39,9;CL:0000134,1.92e-16,354;CL:0002320,6.02e-16,361;CL:0000219,3.41e-14,386;CL:0000226,7.86e-14,3;CL:0000842,7.86e-14,3;CL:0000875,1.06e-13,3;CL:0002396,1.06e-13,3;CL:0000767,1.70e-13,3;CL:0000048,4.78e-12,427;CL:0000723,9.46e-12,433;CL:0000034,2.28e-11,441|ontology_enrichment_development_v019=CL:0002057;1.34e-104;42!CL:0000049;5.81e-19;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.50e-40!80;UBERON:0002390!1.62e-39!102;UBERON:0003061!1.62e-39!102;UBERON:0002193!2.68e-37!112;UBERON:0001474!2.67e-36!86;UBERON:0004765!1.22e-28!101;UBERON:0001434!1.22e-28!101;UBERON:0002405!8.39e-27!115;UBERON:0003081!1.48e-20!216;UBERON:0002204!3.62e-16!167;UBERON:0000926!2.59e-10!448;UBERON:0004120!2.59e-10!448;UBERON:0006603!2.59e-10!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.84e-76,76;UBERON:0001474,8.48e-70,82;UBERON:0002390,1.46e-67,98;UBERON:0003061,1.46e-67,98;UBERON:0004765,6.38e-63,90;UBERON:0002405,1.21e-60,93;UBERON:0002193,1.44e-60,108;UBERON:0001434,7.41e-56,100;UBERON:0003081,1.24e-31,203;UBERON:0002204,3.40e-30,167;UBERON:0000926,3.25e-17,315;UBERON:0004120,3.25e-17,315;UBERON:0006603,3.25e-17,315;UBERON:0002384,2.87e-15,371|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11373559903575,1.53531759238885,4.79929982279836,0,0,0,0,0,0.293600439334847,14.4038806218288,10.0272223735071,9.11445657006578,0,0,0.77272670290256,7.12451370019867,1.51150377475524,5.33684934613196,4.18372266430232,1.6446715520873,3.09706370895104,3.16461631554365,1.5369642391746,2.60130452877444,2.06847408441971,1.29096936716765,4.06279459783025,11.8592673911841,2.72906150057846,8.09004544002305,5.50951006267625,3.85114832491312,2.55734850319616,3.29851300186716,1.19678194572979,0.852449501065388,2.90209238628584,2.8369261234557,1.86846674698672,3.26623264833766,2.08593167368081,2.82345498116652,0.605399502633369,1.84138817993782,0.949387162322653,6.97142444829408,5.95292039902122,4.61249020118427,3.70684482783434,1.65194582125657,1.44653028027372,3.70516566863623,4.37616689837998,3.83594722905731,0,1.09227722252426,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,1.89853131913626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37596867919507,11.8642810450239,1.70764092485511,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.137333840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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C475 | |||
|description=CAGE_peak_at_chr12:125110878..125110906,- | |||
|id=chr12:125110878..125110906,- | |||
|ontology_enrichment_celltype=CL:0000860!3.91e-75!45;CL:0002057!1.10e-71!42;CL:0002194!7.82e-53!63;CL:0000576!7.82e-53!63;CL:0000040!7.82e-53!63;CL:0000559!7.82e-53!63;CL:0002009!9.72e-51!65;CL:0000766!5.70e-48!76;CL:0000839!5.03e-46!70;CL:0000557!3.67e-45!71;CL:0002087!3.42e-34!119;CL:0000738!1.49e-30!140;CL:0002031!1.36e-27!124;CL:0000763!2.12e-27!112;CL:0000049!2.12e-27!112;CL:0000037!1.82e-22!172;CL:0000566!1.82e-22!172;CL:0000988!3.03e-20!182;CL:0002032!8.62e-20!165;CL:0000837!8.62e-20!165;CL:0002393!2.22e-17!9;CL:0002397!2.22e-17!9;CL:0000842!9.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.48e-97;33!CL:0002057;7.48e-97;33!CL:0000576;1.33e-77;48!CL:0000473;1.90e-68;39!CL:0000234;1.90e-68;39!CL:0000766;5.85e-47;69!CL:0002393;5.64e-27;6!CL:0002397;5.64e-27;6!CL:0002087;3.56e-21;104!CL:0000763;2.76e-20;100!CL:0000738;1.41e-14;136!CL:0000226;9.33e-14;3!CL:0000842;9.33e-14;3!CL:0000875;1.21e-13;3!CL:0002396;1.21e-13;3!CL:0000767;1.66e-13;3!CL:0000988;3.80e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.40e-146,42;CL:0002057,4.40e-146,42;CL:0000473,8.70e-127,48;CL:0000234,8.70e-127,48;CL:0002194,9.15e-100,59;CL:0000576,9.15e-100,59;CL:0000040,9.15e-100,59;CL:0000559,9.15e-100,59;CL:0002009,2.81e-96,61;CL:0000766,1.66e-94,72;CL:0000839,1.81e-88,66;CL:0000557,4.80e-87,67;CL:0000763,1.95e-60,108;CL:0000049,1.95e-60,108;CL:0002087,2.71e-59,115;CL:0000738,4.39e-57,136;CL:0002031,8.93e-48,120;CL:0000037,1.39e-44,168;CL:0000988,7.09e-42,177;CL:0002032,7.24e-40,161;CL:0000837,7.24e-40,161;CL:0002393,5.54e-39,9;CL:0002397,5.54e-39,9;CL:0000134,1.92e-16,354;CL:0002320,6.02e-16,361;CL:0000219,3.41e-14,386;CL:0000226,7.86e-14,3;CL:0000842,7.86e-14,3;CL:0000875,1.06e-13,3;CL:0002396,1.06e-13,3;CL:0000767,1.70e-13,3;CL:0000048,4.78e-12,427;CL:0000723,9.46e-12,433;CL:0000034,2.28e-11,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-104;42!CL:0000049;5.81e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.50e-40!80;UBERON:0002390!1.62e-39!102;UBERON:0003061!1.62e-39!102;UBERON:0002193!2.68e-37!112;UBERON:0001474!2.67e-36!86;UBERON:0004765!1.22e-28!101;UBERON:0001434!1.22e-28!101;UBERON:0002405!8.39e-27!115;UBERON:0003081!1.48e-20!216;UBERON:0002204!3.62e-16!167;UBERON:0000926!2.59e-10!448;UBERON:0004120!2.59e-10!448;UBERON:0006603!2.59e-10!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.84e-76,76;UBERON:0001474,8.48e-70,82;UBERON:0002390,1.46e-67,98;UBERON:0003061,1.46e-67,98;UBERON:0004765,6.38e-63,90;UBERON:0002405,1.21e-60,93;UBERON:0002193,1.44e-60,108;UBERON:0001434,7.41e-56,100;UBERON:0003081,1.24e-31,203;UBERON:0002204,3.40e-30,167;UBERON:0000926,3.25e-17,315;UBERON:0004120,3.25e-17,315;UBERON:0006603,3.25e-17,315;UBERON:0002384,2.87e-15,371 | |||
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|short_description=p@chr12:125110878..125110906,- | |||
}} |
Revision as of 21:35, 10 September 2013
Short description: | p@chr12:125110878..125110906, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:125110878..125110906, - |
Coexpression cluster: | C475_CD14_Basophils_CD14CD16_Peripheral_CD133_large_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.84e-76 | 76 |
bone element | 8.48e-70 | 82 |
hematopoietic system | 1.46e-67 | 98 |
blood island | 1.46e-67 | 98 |
skeletal element | 6.38e-63 | 90 |
immune system | 1.21e-60 | 93 |
hemolymphoid system | 1.44e-60 | 108 |
skeletal system | 7.41e-56 | 100 |
lateral plate mesoderm | 1.24e-31 | 203 |
musculoskeletal system | 3.40e-30 | 167 |
mesoderm | 3.25e-17 | 315 |
mesoderm-derived structure | 3.25e-17 | 315 |
presumptive mesoderm | 3.25e-17 | 315 |
connective tissue | 2.87e-15 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.