FFCP PHASE1:Hg19::chr12:125401708..125401719,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr12:125401708..125401719,-|id=chr12:125401708..125401719,-|ontology_enrichment_celltype=CL:0000860!8.12e-28!45;CL:0002057!1.57e-27!42;CL:0000557!1.73e-25!71;CL:0000839!7.61e-23!70;CL:0000766!9.75e-23!76;CL:0002009!1.86e-21!65;CL:0002194!1.93e-19!63;CL:0000576!1.93e-19!63;CL:0000040!1.93e-19!63;CL:0000559!1.93e-19!63;CL:0000738!6.03e-16!140;CL:0002031!5.99e-15!124;CL:0000763!3.02e-14!112;CL:0000049!3.02e-14!112;CL:0002087!1.35e-11!119;CL:0000037!6.64e-10!172;CL:0000566!6.64e-10!172;CL:0002032!7.64e-10!165;CL:0000837!7.64e-10!165;CL:0000988!1.18e-09!182;CL:0002274!3.76e-07!5;CL:0000457!3.76e-07!5;CL:0002191!3.76e-07!5;CL:0000097!3.76e-07!5;CL:0000831!3.76e-07!5;CL:0002028!3.76e-07!5|ontology_enrichment_celltype_v019=CL:0000860;2.52e-40;33!CL:0002057;2.52e-40;33!CL:0000473;4.42e-28;39!CL:0000234;4.42e-28;39!CL:0000576;8.98e-20;48!CL:0001014;2.03e-16;2!CL:0001016;2.03e-16;2!CL:0000766;2.40e-14;69!CL:0000763;4.09e-09;100!CL:0002087;7.06e-09;104!CL:0000097;2.70e-07;5!CL:0000453;4.29e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,1.48e-38,42;CL:0002057,1.48e-38,42;CL:0000557,1.09e-37,67;CL:0000473,2.11e-33,48;CL:0000234,2.11e-33,48;CL:0002009,7.15e-33,61;CL:0000766,4.78e-31,72;CL:0000839,2.83e-30,66;CL:0002194,3.51e-26,59;CL:0000576,3.51e-26,59;CL:0000040,3.51e-26,59;CL:0000559,3.51e-26,59;CL:0000763,7.35e-25,108;CL:0000049,7.35e-25,108;CL:0002031,1.08e-19,120;CL:0000738,4.73e-19,136;CL:0001014,1.37e-16,2;CL:0001016,1.37e-16,2;CL:0002032,1.48e-15,161;CL:0000837,1.48e-15,161;CL:0000037,9.23e-15,168;CL:0000988,7.86e-14,177;CL:0002087,3.26e-12,115;CL:0000097,2.70e-07,5;CL:0002028,2.70e-07,5;CL:0000453,3.68e-07,5|ontology_enrichment_development_v019=CL:0002057;3.95e-29;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.46e-26!80;UBERON:0002405!3.64e-23!115;UBERON:0001474!3.93e-23!86;UBERON:0002390!5.11e-22!102;UBERON:0003061!5.11e-22!102;UBERON:0002193!1.91e-20!112;UBERON:0004765!3.00e-20!101;UBERON:0001434!3.00e-20!101;UBERON:0002204!9.18e-10!167;UBERON:0003081!1.47e-09!216|ontology_enrichment_uberon_v019=UBERON:0000996;7.55e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.80e-33,76;UBERON:0001474,2.84e-30,82;UBERON:0004765,2.59e-27,90;UBERON:0002405,2.47e-26,93;UBERON:0002390,7.84e-25,98;UBERON:0003061,7.84e-25,98;UBERON:0001434,2.84e-24,100;UBERON:0002193,3.06e-22,108;UBERON:0002204,6.86e-15,167;UBERON:0003081,4.77e-13,203;UBERON:0000996,4.91e-09,1;UBERON:0000926,5.11e-08,315;UBERON:0004120,5.11e-08,315;UBERON:0006603,5.11e-08,315|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0,0.157421562627358,0,1.53531759238885,0.619264493264304,0,0,0,0,0,0,1.10799081706375,0,0.868043482863407,0,0,0,0.290796477559129,0,0,0.697287110717054,0.822335776043652,2.16794459626573,2.58923153089935,1.0246428261164,2.83778675866302,5.5159308917859,0.645484683583826,6.77132432971709,1.50593871634084,0.818718450173537,1.12361742222542,7.03992952453076,6.09765151444578,7.67204550958849,0,0.398927315243264,0.426224750532694,1.45104619314292,0,0,0.502497330513487,0.521482918420201,0.434377689410233,3.02699751316684,1.10483290796269,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0.336985893439485,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0.335964256397719,0,0,0,0,0.492663237895943,0.088048434013226,5.59785911960085,0.576479813667846,4.4184851699233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02090169995667,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:125401708..125401719,- | |||
|id=chr12:125401708..125401719,- | |||
|ontology_enrichment_celltype=CL:0000860!8.12e-28!45;CL:0002057!1.57e-27!42;CL:0000557!1.73e-25!71;CL:0000839!7.61e-23!70;CL:0000766!9.75e-23!76;CL:0002009!1.86e-21!65;CL:0002194!1.93e-19!63;CL:0000576!1.93e-19!63;CL:0000040!1.93e-19!63;CL:0000559!1.93e-19!63;CL:0000738!6.03e-16!140;CL:0002031!5.99e-15!124;CL:0000763!3.02e-14!112;CL:0000049!3.02e-14!112;CL:0002087!1.35e-11!119;CL:0000037!6.64e-10!172;CL:0000566!6.64e-10!172;CL:0002032!7.64e-10!165;CL:0000837!7.64e-10!165;CL:0000988!1.18e-09!182;CL:0002274!3.76e-07!5;CL:0000457!3.76e-07!5;CL:0002191!3.76e-07!5;CL:0000097!3.76e-07!5;CL:0000831!3.76e-07!5;CL:0002028!3.76e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-40;33!CL:0002057;2.52e-40;33!CL:0000473;4.42e-28;39!CL:0000234;4.42e-28;39!CL:0000576;8.98e-20;48!CL:0001014;2.03e-16;2!CL:0001016;2.03e-16;2!CL:0000766;2.40e-14;69!CL:0000763;4.09e-09;100!CL:0002087;7.06e-09;104!CL:0000097;2.70e-07;5!CL:0000453;4.29e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.48e-38,42;CL:0002057,1.48e-38,42;CL:0000557,1.09e-37,67;CL:0000473,2.11e-33,48;CL:0000234,2.11e-33,48;CL:0002009,7.15e-33,61;CL:0000766,4.78e-31,72;CL:0000839,2.83e-30,66;CL:0002194,3.51e-26,59;CL:0000576,3.51e-26,59;CL:0000040,3.51e-26,59;CL:0000559,3.51e-26,59;CL:0000763,7.35e-25,108;CL:0000049,7.35e-25,108;CL:0002031,1.08e-19,120;CL:0000738,4.73e-19,136;CL:0001014,1.37e-16,2;CL:0001016,1.37e-16,2;CL:0002032,1.48e-15,161;CL:0000837,1.48e-15,161;CL:0000037,9.23e-15,168;CL:0000988,7.86e-14,177;CL:0002087,3.26e-12,115;CL:0000097,2.70e-07,5;CL:0002028,2.70e-07,5;CL:0000453,3.68e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.95e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.46e-26!80;UBERON:0002405!3.64e-23!115;UBERON:0001474!3.93e-23!86;UBERON:0002390!5.11e-22!102;UBERON:0003061!5.11e-22!102;UBERON:0002193!1.91e-20!112;UBERON:0004765!3.00e-20!101;UBERON:0001434!3.00e-20!101;UBERON:0002204!9.18e-10!167;UBERON:0003081!1.47e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;7.55e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.80e-33,76;UBERON:0001474,2.84e-30,82;UBERON:0004765,2.59e-27,90;UBERON:0002405,2.47e-26,93;UBERON:0002390,7.84e-25,98;UBERON:0003061,7.84e-25,98;UBERON:0001434,2.84e-24,100;UBERON:0002193,3.06e-22,108;UBERON:0002204,6.86e-15,167;UBERON:0003081,4.77e-13,203;UBERON:0000996,4.91e-09,1;UBERON:0000926,5.11e-08,315;UBERON:0004120,5.11e-08,315;UBERON:0006603,5.11e-08,315 | |||
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|short_description=p@chr12:125401708..125401719,- | |||
}} |
Revision as of 21:37, 10 September 2013
Short description: | p@chr12:125401708..125401719, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:125401708..125401719, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.48e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.48e-38 | 42 |
granulocyte monocyte progenitor cell | 1.09e-37 | 67 |
defensive cell | 2.11e-33 | 48 |
phagocyte | 2.11e-33 | 48 |
macrophage dendritic cell progenitor | 7.15e-33 | 61 |
myeloid leukocyte | 4.78e-31 | 72 |
myeloid lineage restricted progenitor cell | 2.83e-30 | 66 |
monopoietic cell | 3.51e-26 | 59 |
monocyte | 3.51e-26 | 59 |
monoblast | 3.51e-26 | 59 |
promonocyte | 3.51e-26 | 59 |
myeloid cell | 7.35e-25 | 108 |
common myeloid progenitor | 7.35e-25 | 108 |
hematopoietic lineage restricted progenitor cell | 1.08e-19 | 120 |
leukocyte | 4.73e-19 | 136 |
CD1a-positive Langerhans cell | 1.37e-16 | 2 |
immature CD1a-positive Langerhans cell | 1.37e-16 | 2 |
hematopoietic oligopotent progenitor cell | 1.48e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-15 | 161 |
hematopoietic stem cell | 9.23e-15 | 168 |
hematopoietic cell | 7.86e-14 | 177 |
nongranular leukocyte | 3.26e-12 | 115 |
mast cell | 2.70e-07 | 5 |
basophil mast progenitor cell | 2.70e-07 | 5 |
Langerhans cell | 3.68e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.80e-33 | 76 |
bone element | 2.84e-30 | 82 |
skeletal element | 2.59e-27 | 90 |
immune system | 2.47e-26 | 93 |
hematopoietic system | 7.84e-25 | 98 |
blood island | 7.84e-25 | 98 |
skeletal system | 2.84e-24 | 100 |
hemolymphoid system | 3.06e-22 | 108 |
musculoskeletal system | 6.86e-15 | 167 |
lateral plate mesoderm | 4.77e-13 | 203 |
vagina | 4.91e-09 | 1 |
mesoderm | 5.11e-08 | 315 |
mesoderm-derived structure | 5.11e-08 | 315 |
presumptive mesoderm | 5.11e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.