FFCP PHASE1:Hg19::chr14:76071877..76071891,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55640|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20105|TSSclassifier=S|UniProt=B7Z485,Q9UPI3|association_with_transcript=72bp_to_ENST00000539311,NM_001195283,uc010tvd.1_5end|coexpression_cluster_id=C2178|description=CAGE_peak_3_at_FLVCR2_5end|id=chr14:76071877..76071891,+|ontology_enrichment_celltype=CL:0002194!2.65e-72!63;CL:0000576!2.65e-72!63;CL:0000040!2.65e-72!63;CL:0000559!2.65e-72!63;CL:0002009!1.03e-69!65;CL:0000839!7.08e-64!70;CL:0000766!1.29e-63!76;CL:0002057!1.99e-63!42;CL:0000557!8.31e-63!71;CL:0000860!1.65e-58!45;CL:0000763!2.89e-45!112;CL:0000049!2.89e-45!112;CL:0002087!7.44e-36!119;CL:0000738!2.96e-33!140;CL:0002031!1.07e-30!124;CL:0000037!1.13e-28!172;CL:0000566!1.13e-28!172;CL:0002032!2.13e-26!165;CL:0000837!2.13e-26!165;CL:0000988!2.50e-26!182;CL:0000134!5.12e-08!358;CL:0000840!1.22e-07!5;CL:0001029!1.22e-07!5;CL:0002320!1.28e-07!365;CL:0002393!9.91e-07!9;CL:0002397!9.91e-07!9|ontology_enrichment_celltype_v019=CL:0000473;5.05e-52;39!CL:0000234;5.05e-52;39!CL:0000860;7.52e-44;33!CL:0002057;7.52e-44;33!CL:0000576;1.55e-24;48!CL:0000235;5.57e-20;6!CL:0000766;8.84e-16;69!CL:0000840;2.39e-12;5!CL:0000763;1.10e-10;100!CL:0000990;2.18e-08;8!CL:0000738;6.56e-08;136!CL:0000451;6.14e-07;10|ontology_enrichment_celltype_v019_2=CL:0002194,1.84e-61,59;CL:0000576,1.84e-61,59;CL:0000040,1.84e-61,59;CL:0000559,1.84e-61,59;CL:0002009,2.35e-59,61;CL:0000473,1.07e-57,48;CL:0000234,1.07e-57,48;CL:0000839,1.21e-54,66;CL:0000557,8.76e-54,67;CL:0000766,7.73e-50,72;CL:0000860,6.12e-42,42;CL:0002057,6.12e-42,42;CL:0000763,3.24e-35,108;CL:0000049,3.24e-35,108;CL:0002087,6.36e-30,115;CL:0002031,1.60e-28,120;CL:0000738,9.95e-25,136;CL:0002032,2.25e-22,161;CL:0000837,2.25e-22,161;CL:0000037,2.81e-21,168;CL:0000988,5.39e-20,177;CL:0000235,7.49e-20,6;CL:0000840,2.39e-12,5;CL:0001029,2.39e-12,5;CL:0000134,6.84e-09,354;CL:0002320,1.24e-08,361;CL:0000990,2.18e-08,8;CL:0000219,1.00e-07,386;CL:0000451,6.14e-07,10|ontology_enrichment_development_v019=CL:0002057;4.93e-31;42!CL:0000049;1.44e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.26e-54!80;UBERON:0002390!1.84e-50!102;UBERON:0003061!1.84e-50!102;UBERON:0001474!1.01e-49!86;UBERON:0002193!5.18e-49!112;UBERON:0002405!1.97e-43!115;UBERON:0004765!1.67e-40!101;UBERON:0001434!1.67e-40!101;UBERON:0003081!9.10e-22!216;UBERON:0002204!8.39e-21!167;UBERON:0000926!1.00e-07!448;UBERON:0004120!1.00e-07!448;UBERON:0006603!1.00e-07!448;UBERON:0002384!1.42e-07!375;UBERON:0000062!4.22e-07!511|ontology_enrichment_uberon_v019=UBERON:0002171;7.46e-09;1!UBERON:0006518;7.46e-09;1!UBERON:0008949;7.46e-09;1!UBERON:0000101;7.46e-09;1!UBERON:0002167;7.46e-09;1!UBERON:0000029;1.78e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.74e-47,76;UBERON:0001474,2.27e-43,82;UBERON:0002405,2.13e-41,93;UBERON:0004765,3.22e-39,90;UBERON:0002390,9.82e-36,98;UBERON:0003061,9.82e-36,98;UBERON:0002193,3.71e-35,108;UBERON:0001434,5.98e-35,100;UBERON:0002204,2.00e-19,167;UBERON:0003081,2.80e-15,203;UBERON:0002171,7.75e-09,1;UBERON:0006518,7.75e-09,1;UBERON:0008949,7.75e-09,1;UBERON:0000101,7.75e-09,1;UBERON:0002167,7.75e-09,1;UBERON:0000029,1.78e-08,1;UBERON:0000926,2.18e-08,315;UBERON:0004120,2.18e-08,315;UBERON:0006603,2.18e-08,315;UBERON:0002384,2.78e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.60435557976113,0.434021741431704,0.671746422719773,0,0.257575567634187,2.90796477559129,3.77875943688809,2.66842467306598,0.464858073811369,0.822335776043652,1.23882548358041,0.863077176966451,3.07392847834921,4.96612682766029,0.689491361473237,0.645484683583826,1.35426486594342,0.376484679085209,1.91034305040492,3.59557575112135,0.918251677112708,0.962787081228281,0,2.30895910130701,7.18069167437875,7.2458207590558,0.580418477257168,0,0,1.50749199154046,4.17186334736161,3.47502151528187,0,0.368277635987565,0.632924774881769,0.211255286311942,0.425208599930087,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,9.41187441598582,10.447784237956,12.4980482887733,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,3.27605971194933,5.20209068010549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55640 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20105 | |||
|TSSclassifier=S | |||
|UniProt=B7Z485,Q9UPI3 | |||
|association_with_transcript=72bp_to_ENST00000539311,NM_001195283,uc010tvd.1_5end | |||
|coexpression_cluster_id=C2178 | |||
|description=CAGE_peak_3_at_FLVCR2_5end | |||
|id=chr14:76071877..76071891,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.65e-72!63;CL:0000576!2.65e-72!63;CL:0000040!2.65e-72!63;CL:0000559!2.65e-72!63;CL:0002009!1.03e-69!65;CL:0000839!7.08e-64!70;CL:0000766!1.29e-63!76;CL:0002057!1.99e-63!42;CL:0000557!8.31e-63!71;CL:0000860!1.65e-58!45;CL:0000763!2.89e-45!112;CL:0000049!2.89e-45!112;CL:0002087!7.44e-36!119;CL:0000738!2.96e-33!140;CL:0002031!1.07e-30!124;CL:0000037!1.13e-28!172;CL:0000566!1.13e-28!172;CL:0002032!2.13e-26!165;CL:0000837!2.13e-26!165;CL:0000988!2.50e-26!182;CL:0000134!5.12e-08!358;CL:0000840!1.22e-07!5;CL:0001029!1.22e-07!5;CL:0002320!1.28e-07!365;CL:0002393!9.91e-07!9;CL:0002397!9.91e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.05e-52;39!CL:0000234;5.05e-52;39!CL:0000860;7.52e-44;33!CL:0002057;7.52e-44;33!CL:0000576;1.55e-24;48!CL:0000235;5.57e-20;6!CL:0000766;8.84e-16;69!CL:0000840;2.39e-12;5!CL:0000763;1.10e-10;100!CL:0000990;2.18e-08;8!CL:0000738;6.56e-08;136!CL:0000451;6.14e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.84e-61,59;CL:0000576,1.84e-61,59;CL:0000040,1.84e-61,59;CL:0000559,1.84e-61,59;CL:0002009,2.35e-59,61;CL:0000473,1.07e-57,48;CL:0000234,1.07e-57,48;CL:0000839,1.21e-54,66;CL:0000557,8.76e-54,67;CL:0000766,7.73e-50,72;CL:0000860,6.12e-42,42;CL:0002057,6.12e-42,42;CL:0000763,3.24e-35,108;CL:0000049,3.24e-35,108;CL:0002087,6.36e-30,115;CL:0002031,1.60e-28,120;CL:0000738,9.95e-25,136;CL:0002032,2.25e-22,161;CL:0000837,2.25e-22,161;CL:0000037,2.81e-21,168;CL:0000988,5.39e-20,177;CL:0000235,7.49e-20,6;CL:0000840,2.39e-12,5;CL:0001029,2.39e-12,5;CL:0000134,6.84e-09,354;CL:0002320,1.24e-08,361;CL:0000990,2.18e-08,8;CL:0000219,1.00e-07,386;CL:0000451,6.14e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.93e-31;42!CL:0000049;1.44e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.26e-54!80;UBERON:0002390!1.84e-50!102;UBERON:0003061!1.84e-50!102;UBERON:0001474!1.01e-49!86;UBERON:0002193!5.18e-49!112;UBERON:0002405!1.97e-43!115;UBERON:0004765!1.67e-40!101;UBERON:0001434!1.67e-40!101;UBERON:0003081!9.10e-22!216;UBERON:0002204!8.39e-21!167;UBERON:0000926!1.00e-07!448;UBERON:0004120!1.00e-07!448;UBERON:0006603!1.00e-07!448;UBERON:0002384!1.42e-07!375;UBERON:0000062!4.22e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;7.46e-09;1!UBERON:0006518;7.46e-09;1!UBERON:0008949;7.46e-09;1!UBERON:0000101;7.46e-09;1!UBERON:0002167;7.46e-09;1!UBERON:0000029;1.78e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.74e-47,76;UBERON:0001474,2.27e-43,82;UBERON:0002405,2.13e-41,93;UBERON:0004765,3.22e-39,90;UBERON:0002390,9.82e-36,98;UBERON:0003061,9.82e-36,98;UBERON:0002193,3.71e-35,108;UBERON:0001434,5.98e-35,100;UBERON:0002204,2.00e-19,167;UBERON:0003081,2.80e-15,203;UBERON:0002171,7.75e-09,1;UBERON:0006518,7.75e-09,1;UBERON:0008949,7.75e-09,1;UBERON:0000101,7.75e-09,1;UBERON:0002167,7.75e-09,1;UBERON:0000029,1.78e-08,1;UBERON:0000926,2.18e-08,315;UBERON:0004120,2.18e-08,315;UBERON:0006603,2.18e-08,315;UBERON:0002384,2.78e-08,371 | |||
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|short_description=p3@FLVCR2 | |||
}} |
Revision as of 05:37, 11 September 2013
Short description: | p3@FLVCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FLVCR2_5end |
Coexpression cluster: | C2178_acute_CD14_Macrophage_Dendritic_anaplastic_chronic_mesothelioma |
Association with transcript: | 72bp_to_ENST00000539311, NM_001195283, uc010tvd.1_5end |
EntrezGene: | FLVCR2 |
HGNC: | 20105 |
UniProt: | B7Z485Q9UPI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.84e-61 | 59 |
monocyte | 1.84e-61 | 59 |
monoblast | 1.84e-61 | 59 |
promonocyte | 1.84e-61 | 59 |
macrophage dendritic cell progenitor | 2.35e-59 | 61 |
defensive cell | 1.07e-57 | 48 |
phagocyte | 1.07e-57 | 48 |
myeloid lineage restricted progenitor cell | 1.21e-54 | 66 |
granulocyte monocyte progenitor cell | 8.76e-54 | 67 |
myeloid leukocyte | 7.73e-50 | 72 |
classical monocyte | 6.12e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.12e-42 | 42 |
myeloid cell | 3.24e-35 | 108 |
common myeloid progenitor | 3.24e-35 | 108 |
nongranular leukocyte | 6.36e-30 | 115 |
hematopoietic lineage restricted progenitor cell | 1.60e-28 | 120 |
leukocyte | 9.95e-25 | 136 |
hematopoietic oligopotent progenitor cell | 2.25e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-22 | 161 |
hematopoietic stem cell | 2.81e-21 | 168 |
hematopoietic cell | 5.39e-20 | 177 |
macrophage | 7.49e-20 | 6 |
immature conventional dendritic cell | 2.39e-12 | 5 |
common dendritic progenitor | 2.39e-12 | 5 |
mesenchymal cell | 6.84e-09 | 354 |
connective tissue cell | 1.24e-08 | 361 |
conventional dendritic cell | 2.18e-08 | 8 |
motile cell | 1.00e-07 | 386 |
dendritic cell | 6.14e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.74e-47 | 76 |
bone element | 2.27e-43 | 82 |
immune system | 2.13e-41 | 93 |
skeletal element | 3.22e-39 | 90 |
hematopoietic system | 9.82e-36 | 98 |
blood island | 9.82e-36 | 98 |
hemolymphoid system | 3.71e-35 | 108 |
skeletal system | 5.98e-35 | 100 |
musculoskeletal system | 2.00e-19 | 167 |
lateral plate mesoderm | 2.80e-15 | 203 |
lower lobe of right lung | 7.75e-09 | 1 |
right lung lobe | 7.75e-09 | 1 |
lower lobe of lung | 7.75e-09 | 1 |
lobe of lung | 7.75e-09 | 1 |
right lung | 7.75e-09 | 1 |
lymph node | 1.78e-08 | 1 |
mesoderm | 2.18e-08 | 315 |
mesoderm-derived structure | 2.18e-08 | 315 |
presumptive mesoderm | 2.18e-08 | 315 |
connective tissue | 2.78e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.