FFCP PHASE1:Hg19::chr15:50429969..50429984,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C7|description=CAGE_peak_at_chr15:50429969..50429984,+|id=chr15:50429969..50429984,+|ontology_enrichment_celltype=CL:0000860!6.43e-33!45;CL:0002057!4.46e-29!42;CL:0002009!8.42e-23!65;CL:0000557!1.16e-21!71;CL:0002194!1.92e-20!63;CL:0000576!1.92e-20!63;CL:0000040!1.92e-20!63;CL:0000559!1.92e-20!63;CL:0000839!5.14e-19!70;CL:0000134!1.18e-18!358;CL:0000048!2.99e-18!430;CL:0000766!3.46e-18!76;CL:0002320!6.75e-18!365;CL:0000034!9.21e-18!444;CL:0000723!1.09e-17!436;CL:0000219!6.07e-16!390;CL:0000763!2.33e-11!112;CL:0000049!2.33e-11!112;CL:0002371!7.99e-11!591;CL:0000144!1.42e-09!625;CL:0002031!1.82e-09!124;CL:0000738!4.14e-08!140;CL:0002087!6.75e-08!119;CL:0000012!8.52e-08!682;CL:0002620!9.35e-08!23;CL:0000548!2.40e-07!679;CL:0000004!2.40e-07!679;CL:0000255!2.40e-07!679;CL:0000003!4.79e-07!722;CL:0000057!6.62e-07!75;CL:0000063!7.97e-07!578|ontology_enrichment_celltype_v019=CL:0000860;3.62e-51;33!CL:0002057;3.62e-51;33!CL:0000473;5.95e-37;39!CL:0000234;5.95e-37;39!CL:0000576;9.81e-24;48!CL:0000766;5.47e-13;69!CL:0000569;8.38e-12;4!CL:0002582;1.64e-07;3!CL:0000219;2.41e-07;193!CL:0002087;2.82e-07;104!CL:0000763;8.21e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,8.91e-44,42;CL:0002057,8.91e-44,42;CL:0000473,1.02e-37,48;CL:0000234,1.02e-37,48;CL:0002194,3.07e-29,59;CL:0000576,3.07e-29,59;CL:0000040,3.07e-29,59;CL:0000559,3.07e-29,59;CL:0002009,3.81e-28,61;CL:0000839,1.07e-25,66;CL:0000557,2.99e-25,67;CL:0000766,3.35e-23,72;CL:0002087,2.28e-14,115;CL:0000763,5.10e-14,108;CL:0000049,5.10e-14,108;CL:0000134,6.71e-14,354;CL:0002031,1.41e-13,120;CL:0002320,1.75e-13,361;CL:0000219,5.14e-12,386;CL:0000569,1.11e-11,4;CL:0000011,1.11e-11,4;CL:0000738,1.93e-11,136;CL:0000034,2.25e-11,441;CL:0000048,4.31e-11,427;CL:0000723,7.87e-11,433;CL:0002032,5.84e-09,161;CL:0000837,5.84e-09,161;CL:0000037,2.12e-08,168;CL:0000988,9.53e-08,177;CL:0002582,1.30e-07,3|ontology_enrichment_development_v019=CL:0002057;3.01e-33;42!CL:0000011;8.38e-12;4|ontology_enrichment_disease=DOID:2394!1.86e-15!14;DOID:120!8.62e-07!27|ontology_enrichment_disease_v019=DOID:2394;1.50e-08;14|ontology_enrichment_disease_v019_2=DOID:2394,1.91e-08,14|ontology_enrichment_uberon=UBERON:0002371!1.45e-22!80;UBERON:0001474!2.78e-20!86;UBERON:0004765!3.79e-18!101;UBERON:0001434!3.79e-18!101;UBERON:0002390!1.07e-17!102;UBERON:0003061!1.07e-17!102;UBERON:0002384!1.42e-17!375;UBERON:0002193!3.39e-15!112;UBERON:0002204!2.73e-14!167;UBERON:0002405!1.06e-12!115;UBERON:0002118!1.54e-10!5;UBERON:0004532!1.54e-10!5;UBERON:0000992!5.42e-09!13;UBERON:0003081!1.64e-08!216|ontology_enrichment_uberon_v019=UBERON:0002118;2.78e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.86e-24,76;UBERON:0001474,4.83e-22,82;UBERON:0004765,1.12e-19,90;UBERON:0002405,6.78e-19,93;UBERON:0002390,1.07e-17,98;UBERON:0003061,1.07e-17,98;UBERON:0001434,2.99e-17,100;UBERON:0002193,1.24e-15,108;UBERON:0002384,6.48e-13,371;UBERON:0003081,9.11e-10,203;UBERON:0002204,1.65e-09,167;UBERON:0002118,3.25e-09,5;UBERON:0000926,1.41e-08,315;UBERON:0004120,1.41e-08,315;UBERON:0006603,1.41e-08,315|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,2.78914844286822,0.822335776043652,8.05236564327269,3.74000110018796,4.86705342405291,9.45928919554341,4.82643953031266,7.74581620300591,6.77132432971709,1.69418105588344,1.36453075028923,3.82029923556644,5.20342617030534,1.60464513538047,5.75403413219137,0.329851300186716,0.598390972864896,0,2.03146467040009,1.70215567407342,0.622822248995575,7.78870862295904,8.34372669472322,13.031330682307,0,0.368277635987565,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79338416662161,0,0.161872944368132,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0.45071417671979,0.113432183160021,0.358779271377724,0,0.211931901159562,0.300091096084402,0.103052529238439,0.772921620136887,0,0.506328996723799,0,0.757301322732344,0.0920498986422993,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0.462629081407967,2.84098760501003,1.8067974323038,0,4.18357362455853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr15:50429969..50429984,+ | |||
|id=chr15:50429969..50429984,+ | |||
|ontology_enrichment_celltype=CL:0000860!6.43e-33!45;CL:0002057!4.46e-29!42;CL:0002009!8.42e-23!65;CL:0000557!1.16e-21!71;CL:0002194!1.92e-20!63;CL:0000576!1.92e-20!63;CL:0000040!1.92e-20!63;CL:0000559!1.92e-20!63;CL:0000839!5.14e-19!70;CL:0000134!1.18e-18!358;CL:0000048!2.99e-18!430;CL:0000766!3.46e-18!76;CL:0002320!6.75e-18!365;CL:0000034!9.21e-18!444;CL:0000723!1.09e-17!436;CL:0000219!6.07e-16!390;CL:0000763!2.33e-11!112;CL:0000049!2.33e-11!112;CL:0002371!7.99e-11!591;CL:0000144!1.42e-09!625;CL:0002031!1.82e-09!124;CL:0000738!4.14e-08!140;CL:0002087!6.75e-08!119;CL:0000012!8.52e-08!682;CL:0002620!9.35e-08!23;CL:0000548!2.40e-07!679;CL:0000004!2.40e-07!679;CL:0000255!2.40e-07!679;CL:0000003!4.79e-07!722;CL:0000057!6.62e-07!75;CL:0000063!7.97e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.62e-51;33!CL:0002057;3.62e-51;33!CL:0000473;5.95e-37;39!CL:0000234;5.95e-37;39!CL:0000576;9.81e-24;48!CL:0000766;5.47e-13;69!CL:0000569;8.38e-12;4!CL:0002582;1.64e-07;3!CL:0000219;2.41e-07;193!CL:0002087;2.82e-07;104!CL:0000763;8.21e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.91e-44,42;CL:0002057,8.91e-44,42;CL:0000473,1.02e-37,48;CL:0000234,1.02e-37,48;CL:0002194,3.07e-29,59;CL:0000576,3.07e-29,59;CL:0000040,3.07e-29,59;CL:0000559,3.07e-29,59;CL:0002009,3.81e-28,61;CL:0000839,1.07e-25,66;CL:0000557,2.99e-25,67;CL:0000766,3.35e-23,72;CL:0002087,2.28e-14,115;CL:0000763,5.10e-14,108;CL:0000049,5.10e-14,108;CL:0000134,6.71e-14,354;CL:0002031,1.41e-13,120;CL:0002320,1.75e-13,361;CL:0000219,5.14e-12,386;CL:0000569,1.11e-11,4;CL:0000011,1.11e-11,4;CL:0000738,1.93e-11,136;CL:0000034,2.25e-11,441;CL:0000048,4.31e-11,427;CL:0000723,7.87e-11,433;CL:0002032,5.84e-09,161;CL:0000837,5.84e-09,161;CL:0000037,2.12e-08,168;CL:0000988,9.53e-08,177;CL:0002582,1.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.01e-33;42!CL:0000011;8.38e-12;4 | |||
|ontology_enrichment_disease=DOID:2394!1.86e-15!14;DOID:120!8.62e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.50e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.91e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.45e-22!80;UBERON:0001474!2.78e-20!86;UBERON:0004765!3.79e-18!101;UBERON:0001434!3.79e-18!101;UBERON:0002390!1.07e-17!102;UBERON:0003061!1.07e-17!102;UBERON:0002384!1.42e-17!375;UBERON:0002193!3.39e-15!112;UBERON:0002204!2.73e-14!167;UBERON:0002405!1.06e-12!115;UBERON:0002118!1.54e-10!5;UBERON:0004532!1.54e-10!5;UBERON:0000992!5.42e-09!13;UBERON:0003081!1.64e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;2.78e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.86e-24,76;UBERON:0001474,4.83e-22,82;UBERON:0004765,1.12e-19,90;UBERON:0002405,6.78e-19,93;UBERON:0002390,1.07e-17,98;UBERON:0003061,1.07e-17,98;UBERON:0001434,2.99e-17,100;UBERON:0002193,1.24e-15,108;UBERON:0002384,6.48e-13,371;UBERON:0003081,9.11e-10,203;UBERON:0002204,1.65e-09,167;UBERON:0002118,3.25e-09,5;UBERON:0000926,1.41e-08,315;UBERON:0004120,1.41e-08,315;UBERON:0006603,1.41e-08,315 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,2.78914844286822,0.822335776043652,8.05236564327269,3.74000110018796,4.86705342405291,9.45928919554341,4.82643953031266,7.74581620300591,6.77132432971709,1.69418105588344,1.36453075028923,3.82029923556644,5.20342617030534,1.60464513538047,5.75403413219137,0.329851300186716,0.598390972864896,0,2.03146467040009,1.70215567407342,0.622822248995575,7.78870862295904,8.34372669472322,13.031330682307,0,0.368277635987565,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79338416662161,0,0.161872944368132,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0.45071417671979,0.113432183160021,0.358779271377724,0,0.211931901159562,0.300091096084402,0.103052529238439,0.772921620136887,0,0.506328996723799,0,0.757301322732344,0.0920498986422993,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0.462629081407967,2.84098760501003,1.8067974323038,0,4.18357362455853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,1.25924938732256,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.246346371159628,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,3.97312626740282,1.66441758450784,1.51522404220071,0.251567901752575,0.889811221596536,2.74608082076308,6.2004678742928,1.08806040407946,0,0.318593534327405,0,0.310525913752519,6.22059311761283,0.265841714557995,1.04349012362347,0,0.380805212168795,0.813741466409323,1.27294061441792,0.214821114084977,3.24823631914946,1.19428766609585,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:50429969..50429984,+ | |||
}} |
Revision as of 07:19, 11 September 2013
Short description: | p@chr15:50429969..50429984, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:50429969..50429984, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.86e-24 | 76 |
bone element | 4.83e-22 | 82 |
skeletal element | 1.12e-19 | 90 |
immune system | 6.78e-19 | 93 |
hematopoietic system | 1.07e-17 | 98 |
blood island | 1.07e-17 | 98 |
skeletal system | 2.99e-17 | 100 |
hemolymphoid system | 1.24e-15 | 108 |
connective tissue | 6.48e-13 | 371 |
lateral plate mesoderm | 9.11e-10 | 203 |
musculoskeletal system | 1.65e-09 | 167 |
right ovary | 3.25e-09 | 5 |
mesoderm | 1.41e-08 | 315 |
mesoderm-derived structure | 1.41e-08 | 315 |
presumptive mesoderm | 1.41e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.91e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.