FFCP PHASE1:Hg19::chr16:70060239..70060250,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2360|description=CAGE_peak_at_chr16:70060239..70060250,-|id=chr16:70060239..70060250,-|ontology_enrichment_celltype=CL:0002057!4.80e-42!42;CL:0000860!9.38e-39!45;CL:0000738!1.26e-36!140;CL:0002087!5.64e-34!119;CL:0002031!1.43e-32!124;CL:0000766!2.02e-32!76;CL:0000839!2.67e-28!70;CL:0000557!8.53e-28!71;CL:0000037!1.26e-27!172;CL:0000566!1.26e-27!172;CL:0002194!3.39e-27!63;CL:0000576!3.39e-27!63;CL:0000040!3.39e-27!63;CL:0000559!3.39e-27!63;CL:0002032!2.26e-26!165;CL:0000837!2.26e-26!165;CL:0002009!3.79e-26!65;CL:0000988!1.83e-25!182;CL:0000763!2.51e-19!112;CL:0000049!2.51e-19!112;CL:0000624!1.79e-12!6;CL:0000219!3.44e-11!390;CL:0000767!5.99e-11!3;CL:0000623!1.70e-10!3;CL:0000825!1.70e-10!3;CL:0000791!1.09e-09!18;CL:0000789!1.09e-09!18;CL:0002420!1.09e-09!18;CL:0002419!1.09e-09!18;CL:0000790!1.09e-09!18;CL:0000134!3.37e-09!358;CL:0002320!8.41e-09!365;CL:0002393!2.61e-08!9;CL:0002397!2.61e-08!9;CL:0000838!4.15e-07!52;CL:0000148!6.16e-07!10;CL:0000541!6.16e-07!10;CL:0000542!6.38e-07!53;CL:0000051!6.38e-07!53;CL:0000048!9.41e-07!430|ontology_enrichment_celltype_v019=CL:0000767;8.15e-28;3!CL:0000623;3.80e-26;3!CL:0000860;2.15e-11;33!CL:0002057;2.15e-11;33!CL:0000094;8.56e-11;8!CL:0000766;2.13e-10;69!CL:0000895;6.91e-10;1!CL:0000473;1.25e-09;39!CL:0000234;1.25e-09;39!CL:0000097;4.77e-08;5!CL:0000081;5.59e-08;11!CL:0000576;6.54e-08;48!CL:0000791;8.53e-08;18!CL:0000789;8.53e-08;18!CL:0002419;8.53e-08;18!CL:0000625;1.53e-07;11|ontology_enrichment_celltype_v019_2=CL:0000767,8.55e-28,3;CL:0000623,1.59e-26,3;CL:0000825,1.59e-26,3;CL:0000738,9.03e-25,136;CL:0000766,4.07e-21,72;CL:0002032,1.88e-20,161;CL:0000837,1.88e-20,161;CL:0002031,3.82e-20,120;CL:0000037,1.80e-19,168;CL:0000988,2.54e-18,177;CL:0002087,2.87e-16,115;CL:0000860,2.17e-15,42;CL:0002057,2.17e-15,42;CL:0000839,6.48e-14,66;CL:0000557,1.10e-13,67;CL:0000763,2.36e-13,108;CL:0000049,2.36e-13,108;CL:0000473,2.62e-13,48;CL:0000234,2.62e-13,48;CL:0000094,8.71e-11,8;CL:0002194,2.16e-10,59;CL:0000576,2.16e-10,59;CL:0000040,2.16e-10,59;CL:0000559,2.16e-10,59;CL:0002009,5.14e-10,61;CL:0000810,5.30e-10,1;CL:0000895,5.30e-10,1;CL:0002436,5.30e-10,1;CL:0002427,5.30e-10,1;CL:0002428,5.30e-10,1;CL:0002429,5.30e-10,1;CL:0002433,5.30e-10,1;CL:0002431,5.30e-10,1;CL:0002432,5.30e-10,1;CL:0000097,4.45e-08,5;CL:0002028,4.45e-08,5;CL:0000081,5.66e-08,11;CL:0000791,8.38e-08,18;CL:0000789,8.38e-08,18;CL:0002420,8.38e-08,18;CL:0002419,8.38e-08,18;CL:0000790,8.38e-08,18;CL:0000625,1.60e-07,11;CL:0000134,1.75e-07,354;CL:0000219,1.94e-07,386;CL:0000838,2.36e-07,52;CL:0002320,2.85e-07,361;CL:0000542,3.35e-07,53;CL:0000051,3.35e-07,53|ontology_enrichment_development_v019=CL:0002057;3.26e-12;42!CL:0002427;6.91e-10;1!CL:0000790;8.53e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!7.93e-24!80;UBERON:0002193!8.21e-22!112;UBERON:0001474!1.21e-21!86;UBERON:0002390!1.30e-21!102;UBERON:0003061!1.30e-21!102;UBERON:0002405!3.29e-18!115;UBERON:0004765!2.52e-17!101;UBERON:0001434!2.52e-17!101;UBERON:0002384!2.92e-08!375;UBERON:0002204!1.06e-07!167;UBERON:0003081!2.27e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.04e-12,76;UBERON:0002405,2.65e-11,93;UBERON:0001474,6.82e-11,82;UBERON:0002390,1.24e-10,98;UBERON:0003061,1.24e-10,98;UBERON:0004765,8.85e-10,90;UBERON:0002193,1.79e-09,108;UBERON:0001434,1.23e-08,100;UBERON:0002384,5.58e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,3.45446458287491,3.56077083626975,0,0,0,0,0,0,2.21598163412751,1.60435557976113,0.651032612147555,0,0,0,0,0,0,1.16214518452842,1.23350366406548,0.309706370895104,0.863077176966451,0.512321413058201,0,2.06847408441971,3.87290810150296,2.70852973188684,0.188242339542605,0.818718450173537,0.224723484445085,0.612167784741805,0.641858054152187,0.639337125799041,0,0,0,0.580418477257168,1.13477044938228,0,1.00499466102697,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,0,0,0.590129310341499,0.786021525498329,0.411202997999018,0,0,0.473447805734733,0,0,0.294605907474837,0,0.541607727530031,0,0,0,0,0.289803085735052,0.296573126324121,0.802622484269139,0,0.113309342697566,1.53288197440768,2.40539211837841,0.253019692019503,0,0,0,0,0,0,0,0,1.41124720257313,1.06976078313403,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,2.90259361757081,0,2.39860623510122,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.2937654491571,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:70060239..70060250,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2360 | |||
|description=CAGE_peak_at_chr16:70060239..70060250,- | |||
|id=chr16:70060239..70060250,- | |||
|ontology_enrichment_celltype=CL:0002057!4.80e-42!42;CL:0000860!9.38e-39!45;CL:0000738!1.26e-36!140;CL:0002087!5.64e-34!119;CL:0002031!1.43e-32!124;CL:0000766!2.02e-32!76;CL:0000839!2.67e-28!70;CL:0000557!8.53e-28!71;CL:0000037!1.26e-27!172;CL:0000566!1.26e-27!172;CL:0002194!3.39e-27!63;CL:0000576!3.39e-27!63;CL:0000040!3.39e-27!63;CL:0000559!3.39e-27!63;CL:0002032!2.26e-26!165;CL:0000837!2.26e-26!165;CL:0002009!3.79e-26!65;CL:0000988!1.83e-25!182;CL:0000763!2.51e-19!112;CL:0000049!2.51e-19!112;CL:0000624!1.79e-12!6;CL:0000219!3.44e-11!390;CL:0000767!5.99e-11!3;CL:0000623!1.70e-10!3;CL:0000825!1.70e-10!3;CL:0000791!1.09e-09!18;CL:0000789!1.09e-09!18;CL:0002420!1.09e-09!18;CL:0002419!1.09e-09!18;CL:0000790!1.09e-09!18;CL:0000134!3.37e-09!358;CL:0002320!8.41e-09!365;CL:0002393!2.61e-08!9;CL:0002397!2.61e-08!9;CL:0000838!4.15e-07!52;CL:0000148!6.16e-07!10;CL:0000541!6.16e-07!10;CL:0000542!6.38e-07!53;CL:0000051!6.38e-07!53;CL:0000048!9.41e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000767;8.15e-28;3!CL:0000623;3.80e-26;3!CL:0000860;2.15e-11;33!CL:0002057;2.15e-11;33!CL:0000094;8.56e-11;8!CL:0000766;2.13e-10;69!CL:0000895;6.91e-10;1!CL:0000473;1.25e-09;39!CL:0000234;1.25e-09;39!CL:0000097;4.77e-08;5!CL:0000081;5.59e-08;11!CL:0000576;6.54e-08;48!CL:0000791;8.53e-08;18!CL:0000789;8.53e-08;18!CL:0002419;8.53e-08;18!CL:0000625;1.53e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,8.55e-28,3;CL:0000623,1.59e-26,3;CL:0000825,1.59e-26,3;CL:0000738,9.03e-25,136;CL:0000766,4.07e-21,72;CL:0002032,1.88e-20,161;CL:0000837,1.88e-20,161;CL:0002031,3.82e-20,120;CL:0000037,1.80e-19,168;CL:0000988,2.54e-18,177;CL:0002087,2.87e-16,115;CL:0000860,2.17e-15,42;CL:0002057,2.17e-15,42;CL:0000839,6.48e-14,66;CL:0000557,1.10e-13,67;CL:0000763,2.36e-13,108;CL:0000049,2.36e-13,108;CL:0000473,2.62e-13,48;CL:0000234,2.62e-13,48;CL:0000094,8.71e-11,8;CL:0002194,2.16e-10,59;CL:0000576,2.16e-10,59;CL:0000040,2.16e-10,59;CL:0000559,2.16e-10,59;CL:0002009,5.14e-10,61;CL:0000810,5.30e-10,1;CL:0000895,5.30e-10,1;CL:0002436,5.30e-10,1;CL:0002427,5.30e-10,1;CL:0002428,5.30e-10,1;CL:0002429,5.30e-10,1;CL:0002433,5.30e-10,1;CL:0002431,5.30e-10,1;CL:0002432,5.30e-10,1;CL:0000097,4.45e-08,5;CL:0002028,4.45e-08,5;CL:0000081,5.66e-08,11;CL:0000791,8.38e-08,18;CL:0000789,8.38e-08,18;CL:0002420,8.38e-08,18;CL:0002419,8.38e-08,18;CL:0000790,8.38e-08,18;CL:0000625,1.60e-07,11;CL:0000134,1.75e-07,354;CL:0000219,1.94e-07,386;CL:0000838,2.36e-07,52;CL:0002320,2.85e-07,361;CL:0000542,3.35e-07,53;CL:0000051,3.35e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.26e-12;42!CL:0002427;6.91e-10;1!CL:0000790;8.53e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.93e-24!80;UBERON:0002193!8.21e-22!112;UBERON:0001474!1.21e-21!86;UBERON:0002390!1.30e-21!102;UBERON:0003061!1.30e-21!102;UBERON:0002405!3.29e-18!115;UBERON:0004765!2.52e-17!101;UBERON:0001434!2.52e-17!101;UBERON:0002384!2.92e-08!375;UBERON:0002204!1.06e-07!167;UBERON:0003081!2.27e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.04e-12,76;UBERON:0002405,2.65e-11,93;UBERON:0001474,6.82e-11,82;UBERON:0002390,1.24e-10,98;UBERON:0003061,1.24e-10,98;UBERON:0004765,8.85e-10,90;UBERON:0002193,1.79e-09,108;UBERON:0001434,1.23e-08,100;UBERON:0002384,5.58e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93364276848904,3.45446458287491,3.56077083626975,0,0,0,0,0,0,2.21598163412751,1.60435557976113,0.651032612147555,0,0,0,0,0,0,1.16214518452842,1.23350366406548,0.309706370895104,0.863077176966451,0.512321413058201,0,2.06847408441971,3.87290810150296,2.70852973188684,0.188242339542605,0.818718450173537,0.224723484445085,0.612167784741805,0.641858054152187,0.639337125799041,0,0,0,0.580418477257168,1.13477044938228,0,1.00499466102697,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,0,0,0.590129310341499,0.786021525498329,0.411202997999018,0,0,0.473447805734733,0,0,0.294605907474837,0,0.541607727530031,0,0,0,0,0.289803085735052,0.296573126324121,0.802622484269139,0,0.113309342697566,1.53288197440768,2.40539211837841,0.253019692019503,0,0,0,0,0,0,0,0,1.41124720257313,1.06976078313403,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,2.90259361757081,0,2.39860623510122,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.2937654491571,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:70060239..70060250,- | |||
}} |
Revision as of 11:21, 11 September 2013
Short description: | p@chr16:70060239..70060250, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:70060239..70060250, - |
Coexpression cluster: | C2360_Basophils_CD14_Mast_Natural_CD34_CD8_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.04e-12 | 76 |
immune system | 2.65e-11 | 93 |
bone element | 6.82e-11 | 82 |
hematopoietic system | 1.24e-10 | 98 |
blood island | 1.24e-10 | 98 |
skeletal element | 8.85e-10 | 90 |
hemolymphoid system | 1.79e-09 | 108 |
skeletal system | 1.23e-08 | 100 |
connective tissue | 5.58e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.