FFCP PHASE1:Hg19::chr17:38506028..38506044,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C250|description=CAGE_peak_at_chr17:38506028..38506044,+|id=chr17:38506028..38506044,+|ontology_enrichment_celltype=CL:0002057!2.13e-26!42;CL:0000860!4.42e-25!45;CL:0000766!2.73e-18!76;CL:0000557!1.26e-16!71;CL:0000839!1.66e-16!70;CL:0002194!8.73e-15!63;CL:0000576!8.73e-15!63;CL:0000040!8.73e-15!63;CL:0000559!8.73e-15!63;CL:0002009!2.48e-14!65;CL:0000738!7.21e-09!140;CL:0002031!8.83e-09!124;CL:0000763!1.19e-08!112;CL:0000049!1.19e-08!112;CL:0002087!1.20e-07!119|ontology_enrichment_celltype_v019=CL:0000860;3.54e-61;33!CL:0002057;3.54e-61;33!CL:0000473;4.02e-43;39!CL:0000234;4.02e-43;39!CL:0000576;3.38e-33;48!CL:0000766;1.15e-23;69!CL:0000763;9.22e-14;100!CL:0002087;2.32e-09;104!CL:0000738;1.92e-07;136!CL:0000097;3.85e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,2.52e-62,42;CL:0002057,2.52e-62,42;CL:0000473,1.47e-53,48;CL:0000234,1.47e-53,48;CL:0000766,2.97e-50,72;CL:0000839,1.96e-45,66;CL:0000557,1.22e-44,67;CL:0002194,2.70e-41,59;CL:0000576,2.70e-41,59;CL:0000040,2.70e-41,59;CL:0000559,2.70e-41,59;CL:0002009,1.03e-39,61;CL:0000763,1.18e-30,108;CL:0000049,1.18e-30,108;CL:0000738,1.23e-25,136;CL:0002031,1.37e-24,120;CL:0002087,1.27e-20,115;CL:0002032,3.01e-20,161;CL:0000837,3.01e-20,161;CL:0000037,4.99e-19,168;CL:0000988,1.33e-17,177;CL:0002320,7.96e-09,361;CL:0000134,1.48e-08,354;CL:0000219,1.60e-07,386;CL:0000097,2.55e-07,5;CL:0002028,2.55e-07,5;CL:0000048,4.99e-07,427;CL:0000723,8.68e-07,433|ontology_enrichment_development_v019=CL:0002057;1.52e-46;42!CL:0000049;1.63e-11;108!UBERON:0006965;1.93e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.77e-14!80;UBERON:0001474!2.85e-12!86;UBERON:0002390!5.42e-12!102;UBERON:0003061!5.42e-12!102;UBERON:0002193!1.79e-10!112;UBERON:0004765!3.34e-10!101;UBERON:0001434!3.34e-10!101;UBERON:0002405!3.80e-10!115;UBERON:0003081!4.88e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.82e-41,76;UBERON:0001474,1.15e-37,82;UBERON:0004765,8.58e-36,90;UBERON:0002390,9.65e-35,98;UBERON:0003061,9.65e-35,98;UBERON:0002405,3.01e-32,93;UBERON:0001434,2.24e-31,100;UBERON:0002193,1.00e-30,108;UBERON:0003081,5.63e-20,203;UBERON:0002204,4.62e-19,167;UBERON:0000926,1.82e-12,315;UBERON:0004120,1.82e-12,315;UBERON:0006603,1.82e-12,315;UBERON:0002384,2.58e-08,371|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0.893922188854576,0,2.53299878168311,1.26343974685366,0.522371256399677,0.245733936501509,2.09340350391728,0,0,0.123766352960047,0,0,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0,0,0,0.458480434487708,0.0821005894499457,0.314843125254717,0.393364276848904,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0.553995408531877,1.40381113229099,0.217010870715852,0,0,0,1.45398238779565,2.64513160582167,1.4555043671269,2.55671940596253,2.05583944010913,1.23882548358041,3.74000110018796,1.5369642391746,1.6553756092201,2.41321976515633,3.87290810150296,2.70852973188684,3.20011977222428,3.0019676506363,0.898893937780338,2.14258724659632,1.28371610830437,2.55734850319616,1.9791078011203,2.19410023383795,2.55734850319616,2.03146467040009,1.13477044938228,0.622822248995575,2.76373531782418,3.65038042894141,2.6062661364614,1.21079900526674,0.736555271975129,0.316462387440884,0.633765858935825,1.06302149982522,0.209658645508376,0.786300418025466,0.750884464207532,0.803627933485401,0.285012743741249,1.79025009479181,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,0,0,0,0,0.393010762749165,0.411202997999018,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.384273959177026,0,0.493313713811028,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0.255973222308837,0,0,0,0.403213486449465,0.802320587350522,0,0,1.34140171940727,0.12786256184353,0.722878304769133,0.50133791063589,0.724232594804119,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.263504357079378,0.458426764241994,0,0.370784442784429,0.324547393654683,0,0.664789802594326,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,1.31780417436063,0,0.872188104285069,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.558350568994769,0,0.389748020644795,0,0.0920498986422993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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C250 | |||
|description=CAGE_peak_at_chr17:38506028..38506044,+ | |||
|id=chr17:38506028..38506044,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.13e-26!42;CL:0000860!4.42e-25!45;CL:0000766!2.73e-18!76;CL:0000557!1.26e-16!71;CL:0000839!1.66e-16!70;CL:0002194!8.73e-15!63;CL:0000576!8.73e-15!63;CL:0000040!8.73e-15!63;CL:0000559!8.73e-15!63;CL:0002009!2.48e-14!65;CL:0000738!7.21e-09!140;CL:0002031!8.83e-09!124;CL:0000763!1.19e-08!112;CL:0000049!1.19e-08!112;CL:0002087!1.20e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.54e-61;33!CL:0002057;3.54e-61;33!CL:0000473;4.02e-43;39!CL:0000234;4.02e-43;39!CL:0000576;3.38e-33;48!CL:0000766;1.15e-23;69!CL:0000763;9.22e-14;100!CL:0002087;2.32e-09;104!CL:0000738;1.92e-07;136!CL:0000097;3.85e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.52e-62,42;CL:0002057,2.52e-62,42;CL:0000473,1.47e-53,48;CL:0000234,1.47e-53,48;CL:0000766,2.97e-50,72;CL:0000839,1.96e-45,66;CL:0000557,1.22e-44,67;CL:0002194,2.70e-41,59;CL:0000576,2.70e-41,59;CL:0000040,2.70e-41,59;CL:0000559,2.70e-41,59;CL:0002009,1.03e-39,61;CL:0000763,1.18e-30,108;CL:0000049,1.18e-30,108;CL:0000738,1.23e-25,136;CL:0002031,1.37e-24,120;CL:0002087,1.27e-20,115;CL:0002032,3.01e-20,161;CL:0000837,3.01e-20,161;CL:0000037,4.99e-19,168;CL:0000988,1.33e-17,177;CL:0002320,7.96e-09,361;CL:0000134,1.48e-08,354;CL:0000219,1.60e-07,386;CL:0000097,2.55e-07,5;CL:0002028,2.55e-07,5;CL:0000048,4.99e-07,427;CL:0000723,8.68e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-46;42!CL:0000049;1.63e-11;108!UBERON:0006965;1.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.77e-14!80;UBERON:0001474!2.85e-12!86;UBERON:0002390!5.42e-12!102;UBERON:0003061!5.42e-12!102;UBERON:0002193!1.79e-10!112;UBERON:0004765!3.34e-10!101;UBERON:0001434!3.34e-10!101;UBERON:0002405!3.80e-10!115;UBERON:0003081!4.88e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.82e-41,76;UBERON:0001474,1.15e-37,82;UBERON:0004765,8.58e-36,90;UBERON:0002390,9.65e-35,98;UBERON:0003061,9.65e-35,98;UBERON:0002405,3.01e-32,93;UBERON:0001434,2.24e-31,100;UBERON:0002193,1.00e-30,108;UBERON:0003081,5.63e-20,203;UBERON:0002204,4.62e-19,167;UBERON:0000926,1.82e-12,315;UBERON:0004120,1.82e-12,315;UBERON:0006603,1.82e-12,315;UBERON:0002384,2.58e-08,371 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,0,0.893922188854576,0,2.53299878168311,1.26343974685366,0.522371256399677,0.245733936501509,2.09340350391728,0,0,0.123766352960047,0,0,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0,0,0,0,0.458480434487708,0.0821005894499457,0.314843125254717,0.393364276848904,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0.553995408531877,1.40381113229099,0.217010870715852,0,0,0,1.45398238779565,2.64513160582167,1.4555043671269,2.55671940596253,2.05583944010913,1.23882548358041,3.74000110018796,1.5369642391746,1.6553756092201,2.41321976515633,3.87290810150296,2.70852973188684,3.20011977222428,3.0019676506363,0.898893937780338,2.14258724659632,1.28371610830437,2.55734850319616,1.9791078011203,2.19410023383795,2.55734850319616,2.03146467040009,1.13477044938228,0.622822248995575,2.76373531782418,3.65038042894141,2.6062661364614,1.21079900526674,0.736555271975129,0.316462387440884,0.633765858935825,1.06302149982522,0.209658645508376,0.786300418025466,0.750884464207532,0.803627933485401,0.285012743741249,1.79025009479181,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,1.14681968437569,0,0,0,0,0.393010762749165,0.411202997999018,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,0.384273959177026,0,0.493313713811028,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0.255973222308837,0,0,0,0.403213486449465,0.802320587350522,0,0,1.34140171940727,0.12786256184353,0.722878304769133,0.50133791063589,0.724232594804119,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.263504357079378,0.458426764241994,0,0.370784442784429,0.324547393654683,0,0.664789802594326,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,0,0,0.183201743930407,1.31780417436063,0,0.872188104285069,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.558350568994769,0,0.389748020644795,0,0.0920498986422993,0.646584227275248,0.355009592516614,0.10075209822764,0.169560592310488,0,0.545492241181669,0.286804595389004,0,0,0,0.310983165046111,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.435758888184812,0.237270619111097,0.269662616320329,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0.144366447761074,0,0.570762456703795,0,0.858486162094873,0.246217006087397,0,0,0,0,0.283550194484773,0,0,0.766765358330422,0.985326475791887,0.968532774145487,3.93923419527467,2.88239906833923,2.90357596880674,0.190493682876507,0,1.17217447210047,0,0.308482478109971,0,0.857479297891735,0.112131084345361,0,0.22001485746285,0,0,0,0.26593811658487,0,0,2.83698264046557,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.579125226670317,0.61642896765115,0,0.112085143993527,0.197030760201927,0.431255149719035,0.385029108839245,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,3.74503511973591,11.966458368161,0,0.24538298343828,1.00034104211935,0,0.207970861530807,2.49800584316026,0.630809660135739,0.702848489956279,0.300946099727719,0,0,0,0,0.0868836144680828,0.587403472388222,0.686286847621712,0,0.862856803274467,0.426910231213777,0,0,0.30239029332968,0.744323423456331,0.306923946576125,1.96462066103151,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,0,0.232420756919918,0.483437798366489,0.200506470303285,0.0920809889358963,0.229628896329213,0.364182336013434,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0,0.501689773854853,0,1.66215201785745,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0.48335359146061,0.154048617114644,0.307007349452259,0,0.107420244868274,0.290033387828457,0.170453254832202,0.356128142586949,0.330569830721956,0,0,0.10115778085555,0,0,0,0,0,0.869932992075073,0.37064843820784,0,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0,0,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0.379473173765715,0.349934720244983,0,1.34060455107157,0,0.0941438007767792,0,0,0,0,0,0,4.5571774973933,0,0,0.648473311192717,0,2.37937552888281,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0.223676107892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| |||
|short_description=p@chr17:38506028..38506044,+ | |||
}} |
Revision as of 13:26, 11 September 2013
Short description: | p@chr17:38506028..38506044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:38506028..38506044, + |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.52e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.52e-62 | 42 |
defensive cell | 1.47e-53 | 48 |
phagocyte | 1.47e-53 | 48 |
myeloid leukocyte | 2.97e-50 | 72 |
myeloid lineage restricted progenitor cell | 1.96e-45 | 66 |
granulocyte monocyte progenitor cell | 1.22e-44 | 67 |
monopoietic cell | 2.70e-41 | 59 |
monocyte | 2.70e-41 | 59 |
monoblast | 2.70e-41 | 59 |
promonocyte | 2.70e-41 | 59 |
macrophage dendritic cell progenitor | 1.03e-39 | 61 |
myeloid cell | 1.18e-30 | 108 |
common myeloid progenitor | 1.18e-30 | 108 |
leukocyte | 1.23e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 1.37e-24 | 120 |
nongranular leukocyte | 1.27e-20 | 115 |
hematopoietic oligopotent progenitor cell | 3.01e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.01e-20 | 161 |
hematopoietic stem cell | 4.99e-19 | 168 |
hematopoietic cell | 1.33e-17 | 177 |
connective tissue cell | 7.96e-09 | 361 |
mesenchymal cell | 1.48e-08 | 354 |
motile cell | 1.60e-07 | 386 |
mast cell | 2.55e-07 | 5 |
basophil mast progenitor cell | 2.55e-07 | 5 |
multi fate stem cell | 4.99e-07 | 427 |
somatic stem cell | 8.68e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.82e-41 | 76 |
bone element | 1.15e-37 | 82 |
skeletal element | 8.58e-36 | 90 |
hematopoietic system | 9.65e-35 | 98 |
blood island | 9.65e-35 | 98 |
immune system | 3.01e-32 | 93 |
skeletal system | 2.24e-31 | 100 |
hemolymphoid system | 1.00e-30 | 108 |
lateral plate mesoderm | 5.63e-20 | 203 |
musculoskeletal system | 4.62e-19 | 167 |
mesoderm | 1.82e-12 | 315 |
mesoderm-derived structure | 1.82e-12 | 315 |
presumptive mesoderm | 1.82e-12 | 315 |
connective tissue | 2.58e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.