FFCP PHASE1:Hg19::chr17:55484111..55484126,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C24|description=CAGE_peak_at_chr17:55484111..55484126,+|id=chr17:55484111..55484126,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;4.89e-53;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001905!9.15e-22!2;UBERON:0002757!9.15e-22!2;UBERON:0010134!9.15e-22!2;UBERON:0002784!9.15e-22!2;UBERON:0005408!9.15e-22!2;UBERON:0001899!9.15e-22!2;UBERON:0002360!1.74e-20!2;UBERON:0000094!1.74e-20!2;UBERON:0007645!1.74e-20!2;UBERON:0000966!5.97e-19!5;UBERON:0005388!5.97e-19!5;UBERON:0001802!5.97e-19!5;UBERON:0000998!1.60e-11!1;UBERON:0006868!1.60e-11!1;UBERON:0003296!2.30e-11!4;UBERON:0010133!2.30e-11!4;UBERON:0002363!6.00e-11!1;UBERON:0007647!6.00e-11!1;UBERON:0010115!6.00e-11!1;UBERON:0005743!5.37e-10!86;UBERON:0000073!6.20e-09!94;UBERON:0001016!6.20e-09!94;UBERON:0000970!2.20e-08!20;UBERON:0003075!3.70e-08!86;UBERON:0007284!3.70e-08!86;UBERON:0002104!5.43e-08!21;UBERON:0002346!9.56e-08!90;UBERON:0000020!2.62e-07!23;UBERON:0001032!5.22e-07!24;UBERON:0004456!5.22e-07!24;UBERON:0001894!7.46e-07!7;UBERON:0006222!7.46e-07!7|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0000966;2.34e-32;5!UBERON:0005388;2.34e-32;5!UBERON:0001802;2.34e-32;5!UBERON:0001894;1.02e-23;7!UBERON:0000970;1.60e-18;20!UBERON:0002104;1.10e-17;21!UBERON:0000020;3.17e-16;23!UBERON:0001032;1.38e-15;24!UBERON:0004456;1.38e-15;24!UBERON:0000019;2.46e-09;19!UBERON:0000047;2.46e-09;19!UBERON:0004088;2.46e-09;19!UBERON:0010230;2.46e-09;19!UBERON:0001456;1.53e-08;21|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0000966,3.11e-27,6;UBERON:0005388,3.11e-27,6;UBERON:0001802,3.11e-27,6;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000970,1.10e-17,21;UBERON:0002104,1.10e-17,21;UBERON:0000020,1.38e-15,24;UBERON:0001032,1.38e-15,24;UBERON:0004456,1.38e-15,24;UBERON:0003056,6.33e-11,61;UBERON:0000019,6.17e-09,20;UBERON:0000047,6.17e-09,20;UBERON:0010312,6.17e-09,20;UBERON:0004088,6.17e-09,20;UBERON:0010230,6.17e-09,20;UBERON:0003072,6.17e-09,20;UBERON:0004128,6.17e-09,20;UBERON:0003071,6.17e-09,20;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0001456,3.27e-08,22;UBERON:0002346,5.76e-08,86|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5353532404703,11.7699302776588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35805433935647,1.26410889386181,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879524133963433,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:55484111..55484126,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr17:55484111..55484126,+ | |||
|id=chr17:55484111..55484126,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.89e-53;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!9.15e-22!2;UBERON:0002757!9.15e-22!2;UBERON:0010134!9.15e-22!2;UBERON:0002784!9.15e-22!2;UBERON:0005408!9.15e-22!2;UBERON:0001899!9.15e-22!2;UBERON:0002360!1.74e-20!2;UBERON:0000094!1.74e-20!2;UBERON:0007645!1.74e-20!2;UBERON:0000966!5.97e-19!5;UBERON:0005388!5.97e-19!5;UBERON:0001802!5.97e-19!5;UBERON:0000998!1.60e-11!1;UBERON:0006868!1.60e-11!1;UBERON:0003296!2.30e-11!4;UBERON:0010133!2.30e-11!4;UBERON:0002363!6.00e-11!1;UBERON:0007647!6.00e-11!1;UBERON:0010115!6.00e-11!1;UBERON:0005743!5.37e-10!86;UBERON:0000073!6.20e-09!94;UBERON:0001016!6.20e-09!94;UBERON:0000970!2.20e-08!20;UBERON:0003075!3.70e-08!86;UBERON:0007284!3.70e-08!86;UBERON:0002104!5.43e-08!21;UBERON:0002346!9.56e-08!90;UBERON:0000020!2.62e-07!23;UBERON:0001032!5.22e-07!24;UBERON:0004456!5.22e-07!24;UBERON:0001894!7.46e-07!7;UBERON:0006222!7.46e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.05e-79;2!UBERON:0002757;1.05e-79;2!UBERON:0010134;1.05e-79;2!UBERON:0005408;1.05e-79;2!UBERON:0001899;1.05e-79;2!UBERON:0003296;1.48e-40;4!UBERON:0010133;1.48e-40;4!UBERON:0002784;1.48e-40;4!UBERON:0000966;2.34e-32;5!UBERON:0005388;2.34e-32;5!UBERON:0001802;2.34e-32;5!UBERON:0001894;1.02e-23;7!UBERON:0000970;1.60e-18;20!UBERON:0002104;1.10e-17;21!UBERON:0000020;3.17e-16;23!UBERON:0001032;1.38e-15;24!UBERON:0004456;1.38e-15;24!UBERON:0000019;2.46e-09;19!UBERON:0000047;2.46e-09;19!UBERON:0004088;2.46e-09;19!UBERON:0010230;2.46e-09;19!UBERON:0001456;1.53e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.05e-79,2;UBERON:0002757,1.05e-79,2;UBERON:0010134,1.05e-79,2;UBERON:0005408,1.05e-79,2;UBERON:0001899,1.05e-79,2;UBERON:0003296,1.48e-40,4;UBERON:0010133,1.48e-40,4;UBERON:0002784,1.48e-40,4;UBERON:0000966,3.11e-27,6;UBERON:0005388,3.11e-27,6;UBERON:0001802,3.11e-27,6;UBERON:0001894,1.02e-23,7;UBERON:0006222,1.02e-23,7;UBERON:0000970,1.10e-17,21;UBERON:0002104,1.10e-17,21;UBERON:0000020,1.38e-15,24;UBERON:0001032,1.38e-15,24;UBERON:0004456,1.38e-15,24;UBERON:0003056,6.33e-11,61;UBERON:0000019,6.17e-09,20;UBERON:0000047,6.17e-09,20;UBERON:0010312,6.17e-09,20;UBERON:0004088,6.17e-09,20;UBERON:0010230,6.17e-09,20;UBERON:0003072,6.17e-09,20;UBERON:0004128,6.17e-09,20;UBERON:0003071,6.17e-09,20;UBERON:0003075,2.54e-08,82;UBERON:0007284,2.54e-08,82;UBERON:0001456,3.27e-08,22;UBERON:0002346,5.76e-08,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5353532404703,11.7699302776588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35805433935647,1.26410889386181,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879524133963433,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:55484111..55484126,+ | |||
}} |
Revision as of 14:43, 11 September 2013
Short description: | p@chr17:55484111..55484126, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:55484111..55484126, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.05e-79 | 2 |
regional part of epithalamus | 1.05e-79 | 2 |
secretory circumventricular organ | 1.05e-79 | 2 |
circumventricular organ | 1.05e-79 | 2 |
epithalamus | 1.05e-79 | 2 |
gland of diencephalon | 1.48e-40 | 4 |
neuroendocrine gland | 1.48e-40 | 4 |
regional part of diencephalon | 1.48e-40 | 4 |
retina | 3.11e-27 | 6 |
photoreceptor array | 3.11e-27 | 6 |
posterior segment of eyeball | 3.11e-27 | 6 |
diencephalon | 1.02e-23 | 7 |
future diencephalon | 1.02e-23 | 7 |
eye | 1.10e-17 | 21 |
visual system | 1.10e-17 | 21 |
sense organ | 1.38e-15 | 24 |
sensory system | 1.38e-15 | 24 |
entire sense organ system | 1.38e-15 | 24 |
pre-chordal neural plate | 6.33e-11 | 61 |
camera-type eye | 6.17e-09 | 20 |
simple eye | 6.17e-09 | 20 |
immature eye | 6.17e-09 | 20 |
ocular region | 6.17e-09 | 20 |
eyeball of camera-type eye | 6.17e-09 | 20 |
optic cup | 6.17e-09 | 20 |
optic vesicle | 6.17e-09 | 20 |
eye primordium | 6.17e-09 | 20 |
neural plate | 2.54e-08 | 82 |
presumptive neural plate | 2.54e-08 | 82 |
face | 3.27e-08 | 22 |
neurectoderm | 5.76e-08 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.