FFCP PHASE1:Hg19::chr19:50180485..50180501,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3276 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5187 | |||
|TSSclassifier=S | |||
|UniProt=B4DJ87,Q99873 | |||
|association_with_transcript=0bp_to_ENST00000449059,uc002ppd.2,uc002ppe.2,uc002ppf.2,uc002ppg.2,uc010enf.1_5end | |||
|description=CAGE_peak_2_at_PRMT1_5end | |||
|id=chr19:50180485..50180501,+ | |||
|ontology_enrichment_celltype=CL:0002321!4.33e-19!248;CL:0000220!2.10e-18!246;CL:0000548!6.22e-17!679;CL:0000004!6.22e-17!679;CL:0000255!6.22e-17!679;CL:0000012!1.11e-16!682;CL:0000066!7.16e-14!254;CL:0000144!2.74e-11!625;CL:0000222!5.56e-11!119;CL:0000393!5.07e-10!60;CL:0000211!5.07e-10!60;CL:0000003!8.89e-10!722;CL:0000183!1.22e-09!59;CL:0002371!3.92e-09!591;CL:0000055!4.41e-09!180;CL:0000187!4.03e-08!54;CL:0000680!4.55e-08!57;CL:0000056!4.55e-08!57;CL:0000355!4.55e-08!57;CL:0000192!1.46e-07!42;CL:0000514!1.46e-07!42;CL:0000359!3.51e-07!32;CL:1000449!3.72e-07!16;CL:0000115!6.12e-07!35;CL:0002078!7.70e-07!44;CL:0000221!7.92e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.40e-08;15!CL:0002681;4.99e-07;12!CL:0002584;4.99e-07;12 | |||
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| |||
|short_description=p2@PRMT1 | |||
}} |
Revision as of 21:50, 11 September 2013
Short description: | p2@PRMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PRMT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000449059, uc002ppd.2, uc002ppe.2, uc002ppf.2, uc002ppg.2, uc010enf.1_5end |
EntrezGene: | PRMT1 |
HGNC: | 5187 |
UniProt: | B4DJ87Q99873 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.01e-19 | 250 |
epithelial cell | 7.86e-14 | 253 |
mesodermal cell | 2.57e-11 | 121 |
electrically responsive cell | 5.16e-10 | 61 |
electrically active cell | 5.16e-10 | 61 |
muscle cell | 4.05e-08 | 55 |
muscle precursor cell | 4.53e-08 | 58 |
myoblast | 4.53e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.53e-08 | 58 |
smooth muscle cell | 1.52e-07 | 43 |
smooth muscle myoblast | 1.52e-07 | 43 |
epithelial cell of nephron | 1.90e-07 | 15 |
endothelial cell | 2.79e-07 | 36 |
vascular associated smooth muscle cell | 2.96e-07 | 32 |
meso-epithelial cell | 3.68e-07 | 45 |
kidney cortical cell | 9.69e-07 | 12 |
renal cortical epithelial cell | 9.69e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.