FFCP PHASE1:Hg19::chr2:73143312..73143323,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2016|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3340|TSSclassifier=S|UniProt=|association_with_transcript=-65bp_to_uc002sim.1_5end|coexpression_cluster_id=C148|description=CAGE_peak_6_at_EMX1_5end|id=chr2:73143312..73143323,+|ontology_enrichment_celltype=CL:0000945!1.80e-07!24;CL:0000826!1.80e-07!24|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;7.05e-34;2!UBERON:0003918;2.08e-27;10!UBERON:0007687;2.08e-27;10!UBERON:0003104;5.96e-10;31|ontology_enrichment_disease=DOID:630!7.01e-09!1;DOID:0050177!7.01e-09!1;DOID:0050427!7.01e-09!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!6.50e-09!1;UBERON:0001882!2.13e-08!1;UBERON:0005403!2.13e-08!1;UBERON:0002902!3.06e-08!1;UBERON:0009899!3.06e-08!1;UBERON:0002022!4.07e-08!1|ontology_enrichment_uberon_v019=UBERON:0001301;4.66e-66;1!UBERON:0006947;4.09e-23;3!UBERON:0004054;4.09e-23;3!UBERON:0005904;1.03e-17;4!UBERON:0002113;3.75e-12;24!UBERON:0011143;3.75e-12;24!UBERON:0000489;2.96e-10;29!UBERON:0006554;5.96e-10;30!UBERON:0001008;5.96e-10;30!UBERON:0000058;6.56e-08;10!UBERON:0003135;2.63e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.66e-66,1;UBERON:0002113,8.76e-24,26;UBERON:0003918,8.76e-24,26;UBERON:0011143,8.76e-24,26;UBERON:0005095,8.76e-24,26;UBERON:0007687,8.76e-24,26;UBERON:0006947,4.09e-23,3;UBERON:0004054,4.09e-23,3;UBERON:0000489,3.79e-20,31;UBERON:0005904,1.03e-17,4;UBERON:0006554,1.10e-13,47;UBERON:0001008,2.00e-13,48;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0003103,8.58e-10,68;UBERON:0005103,1.47e-09,8;UBERON:0000083,1.47e-09,8;UBERON:0009201,1.47e-09,8;UBERON:0006553,1.47e-09,8;UBERON:0003074,1.47e-09,8;UBERON:0003060,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11;UBERON:0005177,6.45e-07,101;UBERON:0003887,8.38e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.57470412614962,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,4.80714814525109,6.34700516433477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699|short_description=p6@EMX1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2016 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3340 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-65bp_to_uc002sim.1_5end | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_6_at_EMX1_5end | |||
|id=chr2:73143312..73143323,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.80e-07!24;CL:0000826!1.80e-07!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.05e-34;2!UBERON:0003918;2.08e-27;10!UBERON:0007687;2.08e-27;10!UBERON:0003104;5.96e-10;31 | |||
|ontology_enrichment_disease=DOID:630!7.01e-09!1;DOID:0050177!7.01e-09!1;DOID:0050427!7.01e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!6.50e-09!1;UBERON:0001882!2.13e-08!1;UBERON:0005403!2.13e-08!1;UBERON:0002902!3.06e-08!1;UBERON:0009899!3.06e-08!1;UBERON:0002022!4.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;4.66e-66;1!UBERON:0006947;4.09e-23;3!UBERON:0004054;4.09e-23;3!UBERON:0005904;1.03e-17;4!UBERON:0002113;3.75e-12;24!UBERON:0011143;3.75e-12;24!UBERON:0000489;2.96e-10;29!UBERON:0006554;5.96e-10;30!UBERON:0001008;5.96e-10;30!UBERON:0000058;6.56e-08;10!UBERON:0003135;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.66e-66,1;UBERON:0002113,8.76e-24,26;UBERON:0003918,8.76e-24,26;UBERON:0011143,8.76e-24,26;UBERON:0005095,8.76e-24,26;UBERON:0007687,8.76e-24,26;UBERON:0006947,4.09e-23,3;UBERON:0004054,4.09e-23,3;UBERON:0000489,3.79e-20,31;UBERON:0005904,1.03e-17,4;UBERON:0006554,1.10e-13,47;UBERON:0001008,2.00e-13,48;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0003103,8.58e-10,68;UBERON:0005103,1.47e-09,8;UBERON:0000083,1.47e-09,8;UBERON:0009201,1.47e-09,8;UBERON:0006553,1.47e-09,8;UBERON:0003074,1.47e-09,8;UBERON:0003060,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11;UBERON:0005177,6.45e-07,101;UBERON:0003887,8.38e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.57470412614962,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,4.80714814525109,6.34700516433477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p6@EMX1 | |||
}} |
Revision as of 19:42, 12 September 2013
Short description: | p6@EMX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_EMX1_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | -65bp_to_uc002sim.1_5end |
EntrezGene: | EMX1 |
HGNC: | 3340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 4.66e-66 | 1 |
kidney | 8.76e-24 | 26 |
kidney mesenchyme | 8.76e-24 | 26 |
upper urinary tract | 8.76e-24 | 26 |
kidney rudiment | 8.76e-24 | 26 |
kidney field | 8.76e-24 | 26 |
male genital duct | 4.09e-23 | 3 |
internal male genitalia | 4.09e-23 | 3 |
cavitated compound organ | 3.79e-20 | 31 |
duct of male reproductive system | 1.03e-17 | 4 |
urinary system structure | 1.10e-13 | 47 |
renal system | 2.00e-13 | 48 |
abdomen element | 4.68e-12 | 54 |
abdominal segment element | 4.68e-12 | 54 |
abdominal segment of trunk | 5.86e-11 | 60 |
abdomen | 5.86e-11 | 60 |
compound organ | 8.58e-10 | 68 |
mesonephric epithelium | 1.47e-09 | 8 |
mesonephric tubule | 1.47e-09 | 8 |
nephric duct | 1.47e-09 | 8 |
renal duct | 1.47e-09 | 8 |
mesonephric duct | 1.47e-09 | 8 |
pronephric duct | 1.47e-09 | 8 |
mesonephros | 1.21e-08 | 9 |
pronephros | 1.21e-08 | 9 |
nephrogenic cord | 1.21e-08 | 9 |
pronephric mesoderm | 1.21e-08 | 9 |
rostral part of nephrogenic cord | 1.21e-08 | 9 |
presumptive pronephric mesoderm | 1.21e-08 | 9 |
male reproductive organ | 2.63e-07 | 11 |
urogenital ridge | 2.63e-07 | 11 |
trunk region element | 6.45e-07 | 101 |
intraembryonic coelom | 8.38e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.