FFCP PHASE1:Hg19::chr2:232063321..232063424,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80210 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20730 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z3E5 | |||
|association_with_transcript=0bp_to_ENST00000359743,ENST00000482392,NM_025139,uc002vrp.3,uc002vrq.3_5end | |||
|description=CAGE_peak_1_at_ARMC9_5end | |||
|id=chr2:232063321..232063424,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.36e-31!180;CL:0000057!5.87e-15!75;CL:0000222!2.92e-10!119;CL:0000220!9.09e-10!246;CL:0002321!9.40e-10!248;CL:0000680!3.73e-09!57;CL:0000056!3.73e-09!57;CL:0000355!3.73e-09!57;CL:0000183!1.75e-08!59;CL:0000187!4.86e-08!54;CL:0000192!1.03e-07!42;CL:0000514!1.03e-07!42;CL:0000393!1.37e-07!60;CL:0000211!1.37e-07!60;CL:0000333!7.77e-07!41;CL:0000133!8.25e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000134;6.99e-08;55!CL:0000048;3.08e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.78e-15,76;CL:0000222,2.18e-10,121;CL:0002321,6.98e-10,250;CL:0000680,2.84e-09,58;CL:0000056,2.84e-09,58;CL:0000355,2.84e-09,58;CL:0000187,3.71e-08,55;CL:0000192,8.02e-08,43;CL:0000514,8.02e-08,43;CL:0000393,1.05e-07,61;CL:0000211,1.05e-07,61;CL:0000333,7.55e-07,41;CL:0000133,8.02e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.92e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.10e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.86e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!7.18e-16!365;UBERON:0000481!8.31e-12!347;UBERON:0000468!8.40e-12!659;UBERON:0000914!2.73e-10!83;UBERON:0002329!2.73e-10!83;UBERON:0003077!2.73e-10!83;UBERON:0003059!2.73e-10!83;UBERON:0007282!2.73e-10!83;UBERON:0009618!2.73e-10!83;UBERON:0007285!2.73e-10!83;UBERON:0000119!2.91e-10!312;UBERON:0000483!8.01e-10!309;UBERON:0004290!9.96e-09!70;UBERON:0000467!4.96e-08!625;UBERON:0000480!6.50e-08!626;UBERON:0000486!7.56e-08!82;UBERON:0005256!1.37e-07!143;UBERON:0001134!1.70e-07!61;UBERON:0002036!1.70e-07!61;UBERON:0003082!1.70e-07!61;UBERON:0002100!1.72e-07!216;UBERON:0002385!1.80e-07!63;UBERON:0001015!1.80e-07!63;UBERON:0000383!1.80e-07!63;UBERON:0000922!3.66e-07!612;UBERON:0000073!6.03e-07!94;UBERON:0001016!6.03e-07!94;UBERON:0005743!8.86e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,6.69e-10,309;UBERON:0000483,1.81e-09,306;UBERON:0007524,4.30e-09,73;UBERON:0003077,7.21e-09,72;UBERON:0007285,7.21e-09,72;UBERON:0002329,8.51e-09,71;UBERON:0003059,8.51e-09,71;UBERON:0007282,8.51e-09,71;UBERON:0004290,8.51e-09,71;UBERON:0009618,8.51e-09,71;UBERON:0003104,3.45e-08,160;UBERON:0009142,3.45e-08,160;UBERON:0007503,3.90e-08,78;UBERON:0010314,4.23e-08,132;UBERON:0000486,6.39e-08,83;UBERON:0001134,1.46e-07,62;UBERON:0002036,1.46e-07,62;UBERON:0003082,1.46e-07,62;UBERON:0002385,1.55e-07,64;UBERON:0001015,1.55e-07,64;UBERON:0000383,1.55e-07,64 | |||
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| |||
|short_description=p1@ARMC9 | |||
}} |
Revision as of 17:21, 12 September 2013
Short description: | p1@ARMC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ARMC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359743, ENST00000482392, NM_025139, uc002vrp.3, uc002vrq.3_5end |
EntrezGene: | ARMC9 |
HGNC: | 20730 |
UniProt: | Q7Z3E5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.78e-15 | 76 |
mesodermal cell | 2.18e-10 | 121 |
embryonic cell | 6.98e-10 | 250 |
muscle precursor cell | 2.84e-09 | 58 |
myoblast | 2.84e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.84e-09 | 58 |
muscle cell | 3.71e-08 | 55 |
smooth muscle cell | 8.02e-08 | 43 |
smooth muscle myoblast | 8.02e-08 | 43 |
electrically responsive cell | 1.05e-07 | 61 |
electrically active cell | 1.05e-07 | 61 |
migratory neural crest cell | 7.55e-07 | 41 |
neurectodermal cell | 8.02e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell layer | 6.69e-10 | 309 |
epithelium | 1.81e-09 | 306 |
dense mesenchyme tissue | 4.30e-09 | 73 |
paraxial mesoderm | 7.21e-09 | 72 |
presumptive paraxial mesoderm | 7.21e-09 | 72 |
somite | 8.51e-09 | 71 |
presomitic mesoderm | 8.51e-09 | 71 |
presumptive segmental plate | 8.51e-09 | 71 |
dermomyotome | 8.51e-09 | 71 |
trunk paraxial mesoderm | 8.51e-09 | 71 |
mesenchyme | 3.45e-08 | 160 |
entire embryonic mesenchyme | 3.45e-08 | 160 |
epithelial vesicle | 3.90e-08 | 78 |
structure with developmental contribution from neural crest | 4.23e-08 | 132 |
multilaminar epithelium | 6.39e-08 | 83 |
skeletal muscle tissue | 1.46e-07 | 62 |
striated muscle tissue | 1.46e-07 | 62 |
myotome | 1.46e-07 | 62 |
muscle tissue | 1.55e-07 | 64 |
musculature | 1.55e-07 | 64 |
musculature of body | 1.55e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.86e-07 | 14 |
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