FFCP PHASE1:Hg19::chr2:235217704..235217719,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1578|description=CAGE_peak_at_chr2:235217704..235217719,+|id=chr2:235217704..235217719,+|ontology_enrichment_celltype=CL:0002057!6.40e-72!42;CL:0000860!3.33e-66!45;CL:0000738!2.30e-59!140;CL:0002031!2.07e-52!124;CL:0000557!3.98e-52!71;CL:0000766!8.02e-51!76;CL:0002087!2.15e-49!119;CL:0000839!3.37e-48!70;CL:0002009!1.12e-47!65;CL:0000037!7.42e-46!172;CL:0000566!7.42e-46!172;CL:0002194!1.11e-44!63;CL:0000576!1.11e-44!63;CL:0000040!1.11e-44!63;CL:0000559!1.11e-44!63;CL:0002032!2.94e-42!165;CL:0000837!2.94e-42!165;CL:0000988!3.52e-42!182;CL:0000763!8.79e-36!112;CL:0000049!8.79e-36!112;CL:0002393!6.46e-18!9;CL:0002397!6.46e-18!9;CL:0000134!8.67e-16!358;CL:0002320!4.40e-15!365;CL:0000219!8.32e-14!390;CL:0000624!8.99e-12!6;CL:0000034!2.12e-10!444;CL:0000048!3.04e-10!430;CL:0000723!7.95e-10!436;CL:0000767!1.09e-07!3;CL:0000791!3.36e-07!18;CL:0000789!3.36e-07!18;CL:0002420!3.36e-07!18;CL:0002419!3.36e-07!18;CL:0000790!3.36e-07!18;CL:0000838!3.81e-07!52;CL:0000623!5.17e-07!3;CL:0000825!5.17e-07!3;CL:0000542!6.26e-07!53;CL:0000051!6.26e-07!53|ontology_enrichment_celltype_v019=CL:0000860;1.08e-53;33!CL:0002057;1.08e-53;33!CL:0000576;4.01e-43;48!CL:0000473;4.50e-37;39!CL:0000234;4.50e-37;39!CL:0000766;8.32e-31;69!CL:0002393;5.87e-21;6!CL:0002397;5.87e-21;6!CL:0002087;2.13e-18;104!CL:0000763;4.59e-14;100!CL:0000624;1.58e-13;6!CL:0000738;6.06e-13;136!CL:0000767;1.11e-11;3!CL:0000623;1.74e-10;3!CL:0000226;5.52e-10;3!CL:0000842;5.52e-10;3!CL:0000988;4.38e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,9.22e-83,42;CL:0002057,9.22e-83,42;CL:0000473,2.84e-71,48;CL:0000234,2.84e-71,48;CL:0000766,2.07e-63,72;CL:0000557,7.50e-61,67;CL:0000738,1.25e-58,136;CL:0000839,1.94e-58,66;CL:0002009,1.51e-56,61;CL:0002194,3.40e-55,59;CL:0000576,3.40e-55,59;CL:0000040,3.40e-55,59;CL:0000559,3.40e-55,59;CL:0002031,1.37e-51,120;CL:0002087,1.71e-51,115;CL:0000037,3.28e-45,168;CL:0000988,2.64e-42,177;CL:0002032,1.07e-41,161;CL:0000837,1.07e-41,161;CL:0000763,2.52e-41,108;CL:0000049,2.52e-41,108;CL:0002393,3.45e-23,9;CL:0002397,3.45e-23,9;CL:0000134,4.49e-15,354;CL:0002320,1.52e-14,361;CL:0000624,1.81e-13,6;CL:0000219,1.11e-12,386;CL:0000767,1.11e-11,3;CL:0000034,4.29e-11,441;CL:0000623,1.43e-10,3;CL:0000825,1.43e-10,3;CL:0000048,2.08e-10,427;CL:0000723,4.27e-10,433;CL:0000226,6.68e-10,3;CL:0000842,6.68e-10,3|ontology_enrichment_development_v019=CL:0002057;5.20e-57;42!CL:0000049;1.26e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.38e-46!80;UBERON:0002390!1.31e-45!102;UBERON:0003061!1.31e-45!102;UBERON:0001474!2.67e-42!86;UBERON:0002193!4.74e-40!112;UBERON:0004765!2.37e-35!101;UBERON:0001434!2.37e-35!101;UBERON:0002405!1.50e-33!115;UBERON:0003081!7.17e-17!216;UBERON:0002204!1.49e-16!167;UBERON:0002384!4.00e-14!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.41e-52,76;UBERON:0002390,1.75e-48,98;UBERON:0003061,1.75e-48,98;UBERON:0001474,4.63e-48,82;UBERON:0002405,7.64e-44,93;UBERON:0002193,4.64e-43,108;UBERON:0004765,5.76e-43,90;UBERON:0001434,9.80e-38,100;UBERON:0002204,8.07e-19,167;UBERON:0003081,3.93e-18,203;UBERON:0002384,8.00e-14,371;UBERON:0000926,3.48e-08,315;UBERON:0004120,3.48e-08,315;UBERON:0006603,3.48e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,6.29382842958246,6.1412703695554,5.10893206943051,0,0,0,0,0,0,14.9578760303607,4.01088894940283,4.12320654360118,0.223915474239924,0,0,1.89017710413434,0,0.242584061187816,1.85943229524548,2.05583944010913,4.33588919253145,1.7261543539329,2.30544635876191,3.31075121844019,4.48169384957604,3.87290810150296,2.70852973188684,3.57660445130949,1.91034305040492,5.8428105955722,2.75475503133812,3.53021929783703,7.03270838378945,1.64925650093358,0.598390972864896,0.426224750532694,0.580418477257168,0.56738522469114,2.4912889959823,2.51248665256743,3.12889751052121,3.9093992046921,2.42159801053347,1.47311054395026,0.949387162322653,3.80259515361495,5.10250319916104,3.35453832813401,2.13424399178341,2.10247649978109,3.05378614724452,2.28010194992999,1.39241674039363,0.547992461293902,0,0,0,0,0,0,0,0,1.1384259382189,0,0.764546456250458,2.64342657158052,1.12101712596307,0,2.16380747125216,4.32311839024081,2.67281948699362,0,1.30368906653436,1.4203434172042,0,0.445641827540694,0.294605907474837,2.21533894583621,0.270803863765016,0,0.260118695119756,0,0,0,1.63115219478266,0.802622484269139,1.04535523804977,0.113309342697566,3.06576394881537,4.81078423675682,2.78321661221453,0,0,0,0,0,0,0,0,2.01606743224732,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1578 | |||
|description=CAGE_peak_at_chr2:235217704..235217719,+ | |||
|id=chr2:235217704..235217719,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.40e-72!42;CL:0000860!3.33e-66!45;CL:0000738!2.30e-59!140;CL:0002031!2.07e-52!124;CL:0000557!3.98e-52!71;CL:0000766!8.02e-51!76;CL:0002087!2.15e-49!119;CL:0000839!3.37e-48!70;CL:0002009!1.12e-47!65;CL:0000037!7.42e-46!172;CL:0000566!7.42e-46!172;CL:0002194!1.11e-44!63;CL:0000576!1.11e-44!63;CL:0000040!1.11e-44!63;CL:0000559!1.11e-44!63;CL:0002032!2.94e-42!165;CL:0000837!2.94e-42!165;CL:0000988!3.52e-42!182;CL:0000763!8.79e-36!112;CL:0000049!8.79e-36!112;CL:0002393!6.46e-18!9;CL:0002397!6.46e-18!9;CL:0000134!8.67e-16!358;CL:0002320!4.40e-15!365;CL:0000219!8.32e-14!390;CL:0000624!8.99e-12!6;CL:0000034!2.12e-10!444;CL:0000048!3.04e-10!430;CL:0000723!7.95e-10!436;CL:0000767!1.09e-07!3;CL:0000791!3.36e-07!18;CL:0000789!3.36e-07!18;CL:0002420!3.36e-07!18;CL:0002419!3.36e-07!18;CL:0000790!3.36e-07!18;CL:0000838!3.81e-07!52;CL:0000623!5.17e-07!3;CL:0000825!5.17e-07!3;CL:0000542!6.26e-07!53;CL:0000051!6.26e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-53;33!CL:0002057;1.08e-53;33!CL:0000576;4.01e-43;48!CL:0000473;4.50e-37;39!CL:0000234;4.50e-37;39!CL:0000766;8.32e-31;69!CL:0002393;5.87e-21;6!CL:0002397;5.87e-21;6!CL:0002087;2.13e-18;104!CL:0000763;4.59e-14;100!CL:0000624;1.58e-13;6!CL:0000738;6.06e-13;136!CL:0000767;1.11e-11;3!CL:0000623;1.74e-10;3!CL:0000226;5.52e-10;3!CL:0000842;5.52e-10;3!CL:0000988;4.38e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.22e-83,42;CL:0002057,9.22e-83,42;CL:0000473,2.84e-71,48;CL:0000234,2.84e-71,48;CL:0000766,2.07e-63,72;CL:0000557,7.50e-61,67;CL:0000738,1.25e-58,136;CL:0000839,1.94e-58,66;CL:0002009,1.51e-56,61;CL:0002194,3.40e-55,59;CL:0000576,3.40e-55,59;CL:0000040,3.40e-55,59;CL:0000559,3.40e-55,59;CL:0002031,1.37e-51,120;CL:0002087,1.71e-51,115;CL:0000037,3.28e-45,168;CL:0000988,2.64e-42,177;CL:0002032,1.07e-41,161;CL:0000837,1.07e-41,161;CL:0000763,2.52e-41,108;CL:0000049,2.52e-41,108;CL:0002393,3.45e-23,9;CL:0002397,3.45e-23,9;CL:0000134,4.49e-15,354;CL:0002320,1.52e-14,361;CL:0000624,1.81e-13,6;CL:0000219,1.11e-12,386;CL:0000767,1.11e-11,3;CL:0000034,4.29e-11,441;CL:0000623,1.43e-10,3;CL:0000825,1.43e-10,3;CL:0000048,2.08e-10,427;CL:0000723,4.27e-10,433;CL:0000226,6.68e-10,3;CL:0000842,6.68e-10,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.20e-57;42!CL:0000049;1.26e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.38e-46!80;UBERON:0002390!1.31e-45!102;UBERON:0003061!1.31e-45!102;UBERON:0001474!2.67e-42!86;UBERON:0002193!4.74e-40!112;UBERON:0004765!2.37e-35!101;UBERON:0001434!2.37e-35!101;UBERON:0002405!1.50e-33!115;UBERON:0003081!7.17e-17!216;UBERON:0002204!1.49e-16!167;UBERON:0002384!4.00e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.41e-52,76;UBERON:0002390,1.75e-48,98;UBERON:0003061,1.75e-48,98;UBERON:0001474,4.63e-48,82;UBERON:0002405,7.64e-44,93;UBERON:0002193,4.64e-43,108;UBERON:0004765,5.76e-43,90;UBERON:0001434,9.80e-38,100;UBERON:0002204,8.07e-19,167;UBERON:0003081,3.93e-18,203;UBERON:0002384,8.00e-14,371;UBERON:0000926,3.48e-08,315;UBERON:0004120,3.48e-08,315;UBERON:0006603,3.48e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,6.29382842958246,6.1412703695554,5.10893206943051,0,0,0,0,0,0,14.9578760303607,4.01088894940283,4.12320654360118,0.223915474239924,0,0,1.89017710413434,0,0.242584061187816,1.85943229524548,2.05583944010913,4.33588919253145,1.7261543539329,2.30544635876191,3.31075121844019,4.48169384957604,3.87290810150296,2.70852973188684,3.57660445130949,1.91034305040492,5.8428105955722,2.75475503133812,3.53021929783703,7.03270838378945,1.64925650093358,0.598390972864896,0.426224750532694,0.580418477257168,0.56738522469114,2.4912889959823,2.51248665256743,3.12889751052121,3.9093992046921,2.42159801053347,1.47311054395026,0.949387162322653,3.80259515361495,5.10250319916104,3.35453832813401,2.13424399178341,2.10247649978109,3.05378614724452,2.28010194992999,1.39241674039363,0.547992461293902,0,0,0,0,0,0,0,0,1.1384259382189,0,0.764546456250458,2.64342657158052,1.12101712596307,0,2.16380747125216,4.32311839024081,2.67281948699362,0,1.30368906653436,1.4203434172042,0,0.445641827540694,0.294605907474837,2.21533894583621,0.270803863765016,0,0.260118695119756,0,0,0,1.63115219478266,0.802622484269139,1.04535523804977,0.113309342697566,3.06576394881537,4.81078423675682,2.78321661221453,0,0,0,0,0,0,0,0,2.01606743224732,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,4.14656231081544,1.29707958075265,3.40854570251226,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56139988262505,3.01878604803324,2.82354679815446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,3.8828556147351,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr2:235217704..235217719,+ | |||
}} |
Revision as of 17:31, 12 September 2013
Short description: | p@chr2:235217704..235217719, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:235217704..235217719, + |
Coexpression cluster: | C1578_CD14_CD4_Basophils_Eosinophils_Neutrophils_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.41e-52 | 76 |
hematopoietic system | 1.75e-48 | 98 |
blood island | 1.75e-48 | 98 |
bone element | 4.63e-48 | 82 |
immune system | 7.64e-44 | 93 |
hemolymphoid system | 4.64e-43 | 108 |
skeletal element | 5.76e-43 | 90 |
skeletal system | 9.80e-38 | 100 |
musculoskeletal system | 8.07e-19 | 167 |
lateral plate mesoderm | 3.93e-18 | 203 |
connective tissue | 8.00e-14 | 371 |
mesoderm | 3.48e-08 | 315 |
mesoderm-derived structure | 3.48e-08 | 315 |
presumptive mesoderm | 3.48e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.