FFCP PHASE1:Hg19::chr21:36260463..36260480,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=861|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=10471|TSSclassifier=N|UniProt=Q01196|association_with_transcript=-286bp_to_D10570_5end|coexpression_cluster_id=C979|description=CAGE_peak_9_at_RUNX1_5end|id=chr21:36260463..36260480,-|ontology_enrichment_celltype=CL:0002057!1.13e-19!42;CL:0000860!2.57e-17!45;CL:0002320!3.06e-15!365;CL:0000134!1.38e-14!358;CL:0002194!1.62e-14!63;CL:0000576!1.62e-14!63;CL:0000040!1.62e-14!63;CL:0000559!1.62e-14!63;CL:0000766!9.23e-14!76;CL:0000557!2.30e-13!71;CL:0000839!3.06e-13!70;CL:0002009!3.33e-13!65;CL:0002371!6.70e-13!591;CL:0000723!2.32e-12!436;CL:0000048!3.65e-12!430;CL:0000034!8.72e-12!444;CL:0000763!9.13e-12!112;CL:0000049!9.13e-12!112;CL:0000219!3.72e-11!390;CL:0000144!4.88e-11!625;CL:0000012!8.51e-11!682;CL:0000988!2.03e-10!182;CL:0000003!2.11e-10!722;CL:0000548!4.66e-10!679;CL:0000004!4.66e-10!679;CL:0000255!4.66e-10!679;CL:0000037!8.85e-10!172;CL:0000566!8.85e-10!172;CL:0000738!3.42e-09!140;CL:0002087!3.46e-09!119;CL:0000063!6.72e-09!578;CL:0002032!1.57e-08!165;CL:0000837!1.57e-08!165;CL:0002031!6.96e-08!124|ontology_enrichment_celltype_v019=CL:0000860;1.81e-30;33!CL:0002057;1.81e-30;33!CL:0000473;3.74e-21;39!CL:0000234;3.74e-21;39!CL:0000576;7.16e-15;48!CL:0000766;7.59e-10;69|ontology_enrichment_celltype_v019_2=CL:0000860,5.38e-28,42;CL:0002057,5.38e-28,42;CL:0000473,1.98e-24,48;CL:0000234,1.98e-24,48;CL:0000766,1.11e-20,72;CL:0000557,1.46e-20,67;CL:0002194,1.50e-20,59;CL:0000576,1.50e-20,59;CL:0000040,1.50e-20,59;CL:0000559,1.50e-20,59;CL:0000839,1.16e-19,66;CL:0002009,1.96e-19,61;CL:0000134,7.31e-18,354;CL:0002320,1.85e-17,361;CL:0000763,5.77e-16,108;CL:0000049,5.77e-16,108;CL:0000988,8.97e-15,177;CL:0002087,1.20e-14,115;CL:0000219,1.29e-14,386;CL:0000738,1.40e-14,136;CL:0000048,2.93e-14,427;CL:0000034,3.62e-14,441;CL:0000723,5.66e-14,433;CL:0000037,6.57e-14,168;CL:0002031,7.42e-14,120;CL:0002032,1.90e-13,161;CL:0000837,1.90e-13,161|ontology_enrichment_development_v019=CL:0002057;1.69e-21;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;1.69e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,9.18e-08,14|ontology_enrichment_uberon=UBERON:0002384!3.68e-15!375;UBERON:0002371!6.76e-13!80;UBERON:0002390!1.26e-11!102;UBERON:0003061!1.26e-11!102;UBERON:0001474!2.95e-11!86;UBERON:0004765!6.68e-10!101;UBERON:0001434!6.68e-10!101;UBERON:0002193!2.21e-08!112;UBERON:0002405!2.68e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.41e-19,76;UBERON:0001474,3.54e-18,82;UBERON:0002384,1.16e-17,371;UBERON:0002390,1.18e-17,98;UBERON:0003061,1.18e-17,98;UBERON:0004765,6.13e-17,90;UBERON:0002405,7.59e-15,93;UBERON:0002193,1.71e-14,108;UBERON:0001434,1.84e-14,100;UBERON:0002204,3.30e-07,167|phase1_expression=0.363356758541113,1.49870366723688,0.281908808191942,2.00146596706261,0.446961094427288,1.74467704820074,2.53299878168311,0,0.261185628199839,1.22866968250754,0.697801167972428,1.96597234917155,0.263766978228454,0.74259811776028,0.662794751455832,0,0,0,0.487932798790507,0.369363174230364,0.408001382488506,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,3.93364276848904,2.68680578668049,5.88301268601089,0,0,1.84877005083394,0,0,0.880801318004542,1.10799081706375,3.40925560699241,1.51907609501096,0.223915474239924,0.32389366601898,0.77272670290256,2.32637182047304,5.66813915533214,4.12392904019288,4.88100977501938,3.70051099219643,7.12324653058738,10.6446185159196,11.7833925003386,12.7700404139836,2.41321976515633,3.87290810150296,4.06279459783025,2.82363509313907,3.0019676506363,3.82029923556644,6.73384563215986,4.49300637906531,4.47535988059329,5.93732340336089,9.57425556583833,6.81959600852311,4.35313857942876,6.80862269629368,3.73693349397345,11.5574386018102,16.1659704710262,13.4657083717172,3.63239701580021,4.41933163185078,2.84816148696796,0.845021145247767,0.637812899895131,0.419317291016752,1.01095768031846,0.901061357049038,0.64290234678832,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,2.64342657158052,2.80254281490768,0.263384084775077,1.57367816091066,1.17903228824749,1.02800749499755,1.33749196312542,0.651844533267181,0,0,1.78256731016278,3.24066498222321,0.443067789167242,4.60366568400527,1.40900451698243,1.8208308658383,0.493313713811028,0,0.869409257205157,0.889719378972363,0,0,1.92625882585863,1.14966148080576,0.68725489096526,1.26509846009751,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,1.20964045934839,1.33720097891754,0.144824403882799,0,0,0,1.0843174571537,0.50133791063589,1.15877215168659,7.95285947051099,4.37971383272372,1.22895262313288,0.221729397462564,0.702678285545008,0.392937226493138,1.09288586487763,0.370784442784429,0.97364218096405,1.21890816109487,1.32957960518865,11.9245312152671,0.571994910780128,5.57186251994347,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.2089949665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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10471 | |||
|TSSclassifier=N | |||
|UniProt=Q01196 | |||
|association_with_transcript=-286bp_to_D10570_5end | |||
|coexpression_cluster_id=C979 | |||
|description=CAGE_peak_9_at_RUNX1_5end | |||
|id=chr21:36260463..36260480,- | |||
|ontology_enrichment_celltype=CL:0002057!1.13e-19!42;CL:0000860!2.57e-17!45;CL:0002320!3.06e-15!365;CL:0000134!1.38e-14!358;CL:0002194!1.62e-14!63;CL:0000576!1.62e-14!63;CL:0000040!1.62e-14!63;CL:0000559!1.62e-14!63;CL:0000766!9.23e-14!76;CL:0000557!2.30e-13!71;CL:0000839!3.06e-13!70;CL:0002009!3.33e-13!65;CL:0002371!6.70e-13!591;CL:0000723!2.32e-12!436;CL:0000048!3.65e-12!430;CL:0000034!8.72e-12!444;CL:0000763!9.13e-12!112;CL:0000049!9.13e-12!112;CL:0000219!3.72e-11!390;CL:0000144!4.88e-11!625;CL:0000012!8.51e-11!682;CL:0000988!2.03e-10!182;CL:0000003!2.11e-10!722;CL:0000548!4.66e-10!679;CL:0000004!4.66e-10!679;CL:0000255!4.66e-10!679;CL:0000037!8.85e-10!172;CL:0000566!8.85e-10!172;CL:0000738!3.42e-09!140;CL:0002087!3.46e-09!119;CL:0000063!6.72e-09!578;CL:0002032!1.57e-08!165;CL:0000837!1.57e-08!165;CL:0002031!6.96e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.81e-30;33!CL:0002057;1.81e-30;33!CL:0000473;3.74e-21;39!CL:0000234;3.74e-21;39!CL:0000576;7.16e-15;48!CL:0000766;7.59e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.38e-28,42;CL:0002057,5.38e-28,42;CL:0000473,1.98e-24,48;CL:0000234,1.98e-24,48;CL:0000766,1.11e-20,72;CL:0000557,1.46e-20,67;CL:0002194,1.50e-20,59;CL:0000576,1.50e-20,59;CL:0000040,1.50e-20,59;CL:0000559,1.50e-20,59;CL:0000839,1.16e-19,66;CL:0002009,1.96e-19,61;CL:0000134,7.31e-18,354;CL:0002320,1.85e-17,361;CL:0000763,5.77e-16,108;CL:0000049,5.77e-16,108;CL:0000988,8.97e-15,177;CL:0002087,1.20e-14,115;CL:0000219,1.29e-14,386;CL:0000738,1.40e-14,136;CL:0000048,2.93e-14,427;CL:0000034,3.62e-14,441;CL:0000723,5.66e-14,433;CL:0000037,6.57e-14,168;CL:0002031,7.42e-14,120;CL:0002032,1.90e-13,161;CL:0000837,1.90e-13,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.69e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.18e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.68e-15!375;UBERON:0002371!6.76e-13!80;UBERON:0002390!1.26e-11!102;UBERON:0003061!1.26e-11!102;UBERON:0001474!2.95e-11!86;UBERON:0004765!6.68e-10!101;UBERON:0001434!6.68e-10!101;UBERON:0002193!2.21e-08!112;UBERON:0002405!2.68e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.41e-19,76;UBERON:0001474,3.54e-18,82;UBERON:0002384,1.16e-17,371;UBERON:0002390,1.18e-17,98;UBERON:0003061,1.18e-17,98;UBERON:0004765,6.13e-17,90;UBERON:0002405,7.59e-15,93;UBERON:0002193,1.71e-14,108;UBERON:0001434,1.84e-14,100;UBERON:0002204,3.30e-07,167 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.281908808191942,2.00146596706261,0.446961094427288,1.74467704820074,2.53299878168311,0,0.261185628199839,1.22866968250754,0.697801167972428,1.96597234917155,0.263766978228454,0.74259811776028,0.662794751455832,0,0,0,0.487932798790507,0.369363174230364,0.408001382488506,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,3.93364276848904,2.68680578668049,5.88301268601089,0,0,1.84877005083394,0,0,0.880801318004542,1.10799081706375,3.40925560699241,1.51907609501096,0.223915474239924,0.32389366601898,0.77272670290256,2.32637182047304,5.66813915533214,4.12392904019288,4.88100977501938,3.70051099219643,7.12324653058738,10.6446185159196,11.7833925003386,12.7700404139836,2.41321976515633,3.87290810150296,4.06279459783025,2.82363509313907,3.0019676506363,3.82029923556644,6.73384563215986,4.49300637906531,4.47535988059329,5.93732340336089,9.57425556583833,6.81959600852311,4.35313857942876,6.80862269629368,3.73693349397345,11.5574386018102,16.1659704710262,13.4657083717172,3.63239701580021,4.41933163185078,2.84816148696796,0.845021145247767,0.637812899895131,0.419317291016752,1.01095768031846,0.901061357049038,0.64290234678832,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,2.64342657158052,2.80254281490768,0.263384084775077,1.57367816091066,1.17903228824749,1.02800749499755,1.33749196312542,0.651844533267181,0,0,1.78256731016278,3.24066498222321,0.443067789167242,4.60366568400527,1.40900451698243,1.8208308658383,0.493313713811028,0,0.869409257205157,0.889719378972363,0,0,1.92625882585863,1.14966148080576,0.68725489096526,1.26509846009751,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,1.20964045934839,1.33720097891754,0.144824403882799,0,0,0,1.0843174571537,0.50133791063589,1.15877215168659,7.95285947051099,4.37971383272372,1.22895262313288,0.221729397462564,0.702678285545008,0.392937226493138,1.09288586487763,0.370784442784429,0.97364218096405,1.21890816109487,1.32957960518865,11.9245312152671,0.571994910780128,5.57186251994347,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.993943903390637,0.379891534993739,2.51577443545116,1.43418310374407,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0,0.756787138224657,0,0.937285727335186,0.624320153660641,0,0.149448680551801,0.117434498643765,0.647491777472526,0.140450806702248,0.408308342509787,0,1.03325781175765,0,0.247266929278557,0,0,0,0,0.554128230968366,0.877955241761676,0.30648779579902,0.300476117813194,0.226864366320042,1.25572744982203,0.85422955527427,1.69545520927649,2.10063767259082,2.67936576019941,0.772921620136887,2.04728541964749,0.843881661206331,1.07180705677318,1.26216887122057,1.84099797284599,0.969876340912871,2.4850671476163,0.705264687593482,0.339121184620975,0.966304265816484,0.818238361772504,2.00763216772303,0,0,0,0,0,0,3.12899064659632,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0.441175890929576,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0.882926198829301,0.122988438543114,0.514703430895577,0.768251997860379,1.1240175325762,0.703702806881416,0.925884451585296,0.325808305310325,0,0,0.579652024875384,0.469634776943287,0,0,0,1.58040879591855,0,0.492434012174795,0,0.297262324577456,0,1.00789276919316,0.567100388969546,0.716468181622786,0.290633938513962,1.53353071666084,36.9497428421958,3.78608266256872,0,0.288239906833923,0,0.126995788584338,0,1.17217447210047,0,0,0,0.571652865261156,0,0,0.22001485746285,4.52451005152222,0,0,1.86156681609409,0,0.257207374262142,0,0,1.57275793023962,2.17048642156577,0,0,1.06617584622764,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0.502257091432126,2.10833939483032,0.718874566474748,0,0,0.868687840005475,1.02738161275192,0.716243852959582,1.45710687191585,1.37921532141349,0.862510299438069,1.41177339907723,1.01637849688985,1.30139853857622,0,0,1.27587750330633,0.749007023947182,0,0.414415513436035,0.858840442033979,2.50085260529839,0.542530047399471,1.45579603071565,1.07057393278297,0.946214490203608,0.35142424497814,0,0,0,0.664225598535437,0.553107505625109,1.12948698808508,0.587403472388222,0,1.24060815673732,0.862856803274467,1.06727557803444,0,1.66435439510497,0.30239029332968,1.24053903909388,2.30192959932094,0.561320188866147,1.79394808957981,1.02341449813341,1.12597744800525,0,0.308419387605311,1.24293207719189,0.9033987161519,0,0.581051892299796,0.120859449591622,1.40354529212299,0.736647911487171,0.574072240823034,0,0.917870904715969,0.902399225814824,0.770153371044148,0.784349769176855,0,0.422206515571503,0,0.170093705276516,0.215915916102139,0,1.08378575017541,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0.325378394664303,0.618246069886334,0.0915694648183434,0.08250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| |||
|short_description=p9@RUNX1 | |||
}} |
Revision as of 10:14, 12 September 2013
Short description: | p9@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RUNX1_5end |
Coexpression cluster: | C979_Mast_CD14_Eosinophils_immature_Neutrophils_CD4_Basophils |
Association with transcript: | -286bp_to_D10570_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | Q01196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.38e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.38e-28 | 42 |
defensive cell | 1.98e-24 | 48 |
phagocyte | 1.98e-24 | 48 |
myeloid leukocyte | 1.11e-20 | 72 |
granulocyte monocyte progenitor cell | 1.46e-20 | 67 |
monopoietic cell | 1.50e-20 | 59 |
monocyte | 1.50e-20 | 59 |
monoblast | 1.50e-20 | 59 |
promonocyte | 1.50e-20 | 59 |
myeloid lineage restricted progenitor cell | 1.16e-19 | 66 |
macrophage dendritic cell progenitor | 1.96e-19 | 61 |
mesenchymal cell | 7.31e-18 | 354 |
connective tissue cell | 1.85e-17 | 361 |
myeloid cell | 5.77e-16 | 108 |
common myeloid progenitor | 5.77e-16 | 108 |
hematopoietic cell | 8.97e-15 | 177 |
nongranular leukocyte | 1.20e-14 | 115 |
motile cell | 1.29e-14 | 386 |
leukocyte | 1.40e-14 | 136 |
multi fate stem cell | 2.93e-14 | 427 |
stem cell | 3.62e-14 | 441 |
somatic stem cell | 5.66e-14 | 433 |
hematopoietic stem cell | 6.57e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 7.42e-14 | 120 |
hematopoietic oligopotent progenitor cell | 1.90e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.90e-13 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.41e-19 | 76 |
bone element | 3.54e-18 | 82 |
connective tissue | 1.16e-17 | 371 |
hematopoietic system | 1.18e-17 | 98 |
blood island | 1.18e-17 | 98 |
skeletal element | 6.13e-17 | 90 |
immune system | 7.59e-15 | 93 |
hemolymphoid system | 1.71e-14 | 108 |
skeletal system | 1.84e-14 | 100 |
musculoskeletal system | 3.30e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.18e-08 | 14 |
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