FFCP PHASE1:Hg19::chr22:35782834..35782851,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3162|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5013|TSSclassifier=N|UniProt=|association_with_transcript=-181bp_to_ENST00000494998_5end|coexpression_cluster_id=C912|description=CAGE_peak_4_at_HMOX1_5end|id=chr22:35782834..35782851,+|ontology_enrichment_celltype=CL:0002057!1.70e-25!42;CL:0002194!2.66e-24!63;CL:0000576!2.66e-24!63;CL:0000040!2.66e-24!63;CL:0000559!2.66e-24!63;CL:0000860!1.65e-23!45;CL:0002009!6.86e-23!65;CL:0000839!1.29e-20!70;CL:0000766!2.49e-19!76;CL:0000557!3.51e-19!71;CL:0000048!8.46e-16!430;CL:0000723!8.34e-15!436;CL:0000034!5.33e-14!444;CL:0002320!8.36e-12!365;CL:0000134!4.00e-11!358;CL:0000763!2.25e-10!112;CL:0000049!2.25e-10!112;CL:0000219!9.38e-09!390;CL:0002371!3.02e-08!591;CL:0002087!1.26e-07!119;CL:0000144!2.53e-07!625|ontology_enrichment_celltype_v019=CL:0000860;2.56e-38;33!CL:0002057;2.56e-38;33!CL:0000473;3.02e-34;39!CL:0000234;3.02e-34;39!CL:0000576;8.21e-33;48!CL:0000766;3.77e-18;69!CL:0000763;6.17e-09;100!CL:0002619;3.49e-08;3!CL:0002087;7.46e-07;104!CL:0000738;9.35e-07;136|ontology_enrichment_celltype_v019_2=CL:0000473,3.49e-48,48;CL:0000234,3.49e-48,48;CL:0000860,1.49e-46,42;CL:0002057,1.49e-46,42;CL:0002194,1.54e-44,59;CL:0000576,1.54e-44,59;CL:0000040,1.54e-44,59;CL:0000559,1.54e-44,59;CL:0002009,9.19e-43,61;CL:0000839,8.61e-39,66;CL:0000557,4.56e-38,67;CL:0000766,3.64e-37,72;CL:0000763,3.26e-26,108;CL:0000049,3.26e-26,108;CL:0000738,1.28e-18,136;CL:0002087,3.80e-18,115;CL:0002320,6.87e-18,361;CL:0002031,5.36e-17,120;CL:0000134,6.28e-17,354;CL:0000048,1.17e-15,427;CL:0000723,3.36e-15,433;CL:0000034,1.31e-14,441;CL:0002032,4.03e-14,161;CL:0000837,4.03e-14,161;CL:0000219,5.19e-14,386;CL:0000037,4.13e-13,168;CL:0000988,9.65e-13,177;CL:0002619,4.13e-08,3;CL:0002393,4.37e-07,9;CL:0002397,4.37e-07,9|ontology_enrichment_development_v019=CL:0002057;2.76e-34;42!CL:0000049;1.95e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.88e-19!80;UBERON:0002204!2.66e-19!167;UBERON:0002405!5.39e-19!115;UBERON:0002193!6.18e-18!112;UBERON:0001474!1.42e-17!86;UBERON:0002390!8.00e-17!102;UBERON:0003061!8.00e-17!102;UBERON:0004765!1.34e-16!101;UBERON:0001434!1.34e-16!101;UBERON:0003081!3.15e-13!216;UBERON:0000926!3.08e-11!448;UBERON:0004120!3.08e-11!448;UBERON:0006603!3.08e-11!448;UBERON:0002384!4.33e-11!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.15e-39,76;UBERON:0001474,2.12e-37,82;UBERON:0004765,4.86e-35,90;UBERON:0001434,4.41e-34,100;UBERON:0002405,1.10e-33,93;UBERON:0002390,1.22e-29,98;UBERON:0003061,1.22e-29,98;UBERON:0002193,1.79e-27,108;UBERON:0002204,2.59e-25,167;UBERON:0003081,1.63e-18,203;UBERON:0002384,5.90e-17,371;UBERON:0000926,3.78e-11,315;UBERON:0004120,3.78e-11,315;UBERON:0006603,3.78e-11,315|phase1_expression=0.54503513781167,1.92690471501885,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.37129905888014,1.32558950291166,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0.229240217243854,0.0821005894499457,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,2.46307021663917,2.91504299417082,1.03030227053675,7.12451370019867,9.82477453590904,9.46077838632483,2.32429036905685,4.52284676824008,3.71647645074124,2.3015391385772,1.7931249457037,1.18241114944293,5.86067657252252,5.16387746867061,5.41705946377367,9.41211697713024,24.5615535052061,6.29225756446237,5.81559395504715,4.17207735198922,3.19668562899521,2.63881040149373,3.98927315243264,2.55734850319616,0.580418477257168,0,0.622822248995575,2.26123798731069,1.5644487552606,2.17188844705117,0.605399502633369,0.368277635987565,0,2.32380814943136,2.97646019951061,1.46761051855863,0.786300418025466,0.450530678524519,0.64290234678832,0.570025487482497,3.38158351238453,2.92262646023414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.434539556882471,0.795285947051099,2.43317435151318,0,0,0,0.130979075497713,0,0,0,0.348259474598534,0.664789802594326,0,0,0,0.39752481473341,0,0,1.13061588384802,0.419499436209906,0.825354125820202,0.626984899610432,0.516833518338658,0,0,0.402829317109147,2.28081631715554,0.488124115096339,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0.949265659568129,0.183201743930407,0,3.87780264148325,0,0,0.379891534993739,0.132409180813219,0,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0,0.516628905878827,1.18800285728205,0.989067717114227,0,1.43723628363248,0,0,0,0,1.22595118319608,0.901428353439581,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.487185025805993,0.504867548488229,0.276149695926898,0.646584227275248,0,0.403008392910561,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3162 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5013 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-181bp_to_ENST00000494998_5end | |||
|coexpression_cluster_id=C912 | |||
|description=CAGE_peak_4_at_HMOX1_5end | |||
|id=chr22:35782834..35782851,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.70e-25!42;CL:0002194!2.66e-24!63;CL:0000576!2.66e-24!63;CL:0000040!2.66e-24!63;CL:0000559!2.66e-24!63;CL:0000860!1.65e-23!45;CL:0002009!6.86e-23!65;CL:0000839!1.29e-20!70;CL:0000766!2.49e-19!76;CL:0000557!3.51e-19!71;CL:0000048!8.46e-16!430;CL:0000723!8.34e-15!436;CL:0000034!5.33e-14!444;CL:0002320!8.36e-12!365;CL:0000134!4.00e-11!358;CL:0000763!2.25e-10!112;CL:0000049!2.25e-10!112;CL:0000219!9.38e-09!390;CL:0002371!3.02e-08!591;CL:0002087!1.26e-07!119;CL:0000144!2.53e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.56e-38;33!CL:0002057;2.56e-38;33!CL:0000473;3.02e-34;39!CL:0000234;3.02e-34;39!CL:0000576;8.21e-33;48!CL:0000766;3.77e-18;69!CL:0000763;6.17e-09;100!CL:0002619;3.49e-08;3!CL:0002087;7.46e-07;104!CL:0000738;9.35e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.49e-48,48;CL:0000234,3.49e-48,48;CL:0000860,1.49e-46,42;CL:0002057,1.49e-46,42;CL:0002194,1.54e-44,59;CL:0000576,1.54e-44,59;CL:0000040,1.54e-44,59;CL:0000559,1.54e-44,59;CL:0002009,9.19e-43,61;CL:0000839,8.61e-39,66;CL:0000557,4.56e-38,67;CL:0000766,3.64e-37,72;CL:0000763,3.26e-26,108;CL:0000049,3.26e-26,108;CL:0000738,1.28e-18,136;CL:0002087,3.80e-18,115;CL:0002320,6.87e-18,361;CL:0002031,5.36e-17,120;CL:0000134,6.28e-17,354;CL:0000048,1.17e-15,427;CL:0000723,3.36e-15,433;CL:0000034,1.31e-14,441;CL:0002032,4.03e-14,161;CL:0000837,4.03e-14,161;CL:0000219,5.19e-14,386;CL:0000037,4.13e-13,168;CL:0000988,9.65e-13,177;CL:0002619,4.13e-08,3;CL:0002393,4.37e-07,9;CL:0002397,4.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-34;42!CL:0000049;1.95e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.88e-19!80;UBERON:0002204!2.66e-19!167;UBERON:0002405!5.39e-19!115;UBERON:0002193!6.18e-18!112;UBERON:0001474!1.42e-17!86;UBERON:0002390!8.00e-17!102;UBERON:0003061!8.00e-17!102;UBERON:0004765!1.34e-16!101;UBERON:0001434!1.34e-16!101;UBERON:0003081!3.15e-13!216;UBERON:0000926!3.08e-11!448;UBERON:0004120!3.08e-11!448;UBERON:0006603!3.08e-11!448;UBERON:0002384!4.33e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.15e-39,76;UBERON:0001474,2.12e-37,82;UBERON:0004765,4.86e-35,90;UBERON:0001434,4.41e-34,100;UBERON:0002405,1.10e-33,93;UBERON:0002390,1.22e-29,98;UBERON:0003061,1.22e-29,98;UBERON:0002193,1.79e-27,108;UBERON:0002204,2.59e-25,167;UBERON:0003081,1.63e-18,203;UBERON:0002384,5.90e-17,371;UBERON:0000926,3.78e-11,315;UBERON:0004120,3.78e-11,315;UBERON:0006603,3.78e-11,315 | |||
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| |||
|short_description=p4@HMOX1 | |||
}} |
Revision as of 11:40, 12 September 2013
Short description: | p4@HMOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HMOX1_5end |
Coexpression cluster: | C912_CD14_mesothelioma_tenocyte_migratory_mesenchymal_spleen_CD14CD16 |
Association with transcript: | -181bp_to_ENST00000494998_5end |
EntrezGene: | HMOX1 |
HGNC: | 5013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.15e-39 | 76 |
bone element | 2.12e-37 | 82 |
skeletal element | 4.86e-35 | 90 |
skeletal system | 4.41e-34 | 100 |
immune system | 1.10e-33 | 93 |
hematopoietic system | 1.22e-29 | 98 |
blood island | 1.22e-29 | 98 |
hemolymphoid system | 1.79e-27 | 108 |
musculoskeletal system | 2.59e-25 | 167 |
lateral plate mesoderm | 1.63e-18 | 203 |
connective tissue | 5.90e-17 | 371 |
mesoderm | 3.78e-11 | 315 |
mesoderm-derived structure | 3.78e-11 | 315 |
presumptive mesoderm | 3.78e-11 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.