FFCP PHASE1:Hg19::chr3:128721079..128721099,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr3:128721079..128721099,- | |||
|id=chr3:128721079..128721099,- | |||
|ontology_enrichment_celltype=CL:0002322!5.83e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000037;8.34e-34;1!CL:0001024;8.34e-34;1!CL:0002535;9.07e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,7.06e-34,1;CL:0002535,9.07e-18,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.32e-09;4!DOID:4362;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.32e-09,4;DOID:4362,6.55e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.93e-15!115;UBERON:0001049!1.43e-12!57;UBERON:0005068!1.43e-12!57;UBERON:0006241!1.43e-12!57;UBERON:0007135!1.43e-12!57;UBERON:0003076!4.79e-11!15;UBERON:0003057!4.79e-11!15;UBERON:0004733!7.77e-11!12;UBERON:0002028!7.77e-11!12;UBERON:0007277!7.77e-11!12;UBERON:0002616!1.52e-10!59;UBERON:0001017!1.60e-10!82;UBERON:0002619!4.40e-10!22;UBERON:0004732!6.43e-10!13;UBERON:0005743!8.42e-10!86;UBERON:0000988!1.61e-09!3;UBERON:0000073!2.34e-09!94;UBERON:0001016!2.34e-09!94;UBERON:0002020!8.71e-09!34;UBERON:0003528!8.71e-09!34;UBERON:0000956!1.09e-08!25;UBERON:0000203!1.09e-08!25;UBERON:0002298!1.18e-08!8;UBERON:0000955!2.97e-08!69;UBERON:0006238!2.97e-08!69;UBERON:0002346!3.22e-08!90;UBERON:0002680!4.65e-08!9;UBERON:0001895!4.65e-08!9;UBERON:0010092!4.65e-08!9;UBERON:0003075!7.57e-08!86;UBERON:0007284!7.57e-08!86;UBERON:0001869!7.93e-08!32;UBERON:0001893!2.97e-07!34;UBERON:0001954!3.64e-07!2;UBERON:0003022!3.64e-07!2;UBERON:0002421!3.64e-07!2;UBERON:0002600!3.64e-07!2;UBERON:0001950!5.83e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.41e-67;2!UBERON:0005058;7.41e-67;2!UBERON:0009113;7.41e-67;2!UBERON:0004177;1.59e-27;5!UBERON:0005057;1.59e-27;5!UBERON:0006955;9.07e-18;2!UBERON:0004801;9.07e-18;2!UBERON:0000988;3.06e-12;3!UBERON:0002405;8.46e-12;27!UBERON:0002390;3.04e-08;32!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6!UBERON:0002298;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.28e-34,4;UBERON:0005058,4.28e-34,4;UBERON:0009113,4.28e-34,4;UBERON:0003295,4.28e-34,4;UBERON:0005562,4.28e-34,4;UBERON:0003351,3.88e-23,6;UBERON:0004177,5.35e-20,7;UBERON:0005057,5.35e-20,7;UBERON:0006955,9.07e-18,2;UBERON:0004801,9.07e-18,2;UBERON:0000974,2.49e-14,10;UBERON:0003408,2.49e-14,10;UBERON:0001042,2.49e-14,10;UBERON:0009145,2.49e-14,10;UBERON:0006562,4.00e-13,11;UBERON:0009722,4.00e-13,11;UBERON:0007690,4.00e-13,11;UBERON:0000988,3.24e-12,3;UBERON:0004807,1.92e-11,28;UBERON:0008814,2.09e-08,18;UBERON:0001557,5.16e-08,19;UBERON:0000072,4.22e-07,47;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6;UBERON:0002298,9.49e-07,6 | |||
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|short_description=p@chr3:128721079..128721099,- | |||
}} |
Revision as of 21:26, 12 September 2013
Short description: | p@chr3:128721079..128721099, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:128721079..128721099, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 7.06e-34 | 1 |
epithelial cell of cervix | 9.07e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.28e-34 | 4 |
hemolymphoid system gland | 4.28e-34 | 4 |
thymic region | 4.28e-34 | 4 |
pharyngeal gland | 4.28e-34 | 4 |
thymus primordium | 4.28e-34 | 4 |
pharyngeal epithelium | 3.88e-23 | 6 |
hemopoietic organ | 5.35e-20 | 7 |
immune organ | 5.35e-20 | 7 |
uterine epithelium | 9.07e-18 | 2 |
cervix epithelium | 9.07e-18 | 2 |
neck | 2.49e-14 | 10 |
gland of gut | 2.49e-14 | 10 |
chordate pharynx | 2.49e-14 | 10 |
pharyngeal region of foregut | 2.49e-14 | 10 |
pharynx | 4.00e-13 | 11 |
entire pharyngeal arch endoderm | 4.00e-13 | 11 |
early pharyngeal endoderm | 4.00e-13 | 11 |
pons | 3.24e-12 | 3 |
respiratory system epithelium | 1.92e-11 | 28 |
pharyngeal arch system | 2.09e-08 | 18 |
upper respiratory tract | 5.16e-08 | 19 |
segment of respiratory tract | 4.22e-07 | 47 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
brainstem | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.32e-09 | 4 |
cervical cancer | 6.55e-08 | 5 |
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