FFCP PHASE1:Hg19::chr4:51561..51600,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C62|description=CAGE_peak_at_chr4:51561..51600,-|id=chr4:51561..51600,-|ontology_enrichment_celltype=CL:0000037!9.67e-39!172;CL:0000566!9.67e-39!172;CL:0000988!1.98e-35!182;CL:0002032!1.35e-31!165;CL:0000837!1.35e-31!165;CL:0000945!7.66e-28!24;CL:0000826!7.66e-28!24;CL:0000236!1.02e-24!14;CL:0000542!3.70e-18!53;CL:0000051!3.70e-18!53;CL:0000838!5.85e-17!52;CL:0000738!2.46e-14!140;CL:0000763!3.35e-14!112;CL:0000049!3.35e-14!112;CL:0002087!4.72e-13!119;CL:0002031!2.39e-10!124;CL:0000134!2.74e-08!358;CL:0002320!8.47e-08!365;CL:0000784!5.20e-07!3|ontology_enrichment_celltype_v019=CL:0000945;6.44e-31;24!CL:0000236;2.83e-28;13!CL:0000542;1.05e-12;53!CL:0000784;1.33e-10;3|ontology_enrichment_celltype_v019_2=CL:0000945,6.39e-31,24;CL:0000826,6.39e-31,24;CL:0000037,9.33e-29,168;CL:0000988,1.05e-26,177;CL:0000236,4.39e-26,14;CL:0002032,4.97e-23,161;CL:0000837,4.97e-23,161;CL:0000542,8.97e-17,53;CL:0000051,8.97e-17,53;CL:0000838,3.30e-15,52;CL:0000784,1.33e-10,3;CL:0000763,1.05e-08,108;CL:0000049,1.05e-08,108;CL:0000738,8.36e-08,136;CL:0000134,9.72e-08,354;CL:0002320,2.20e-07,361|ontology_enrichment_development_v019=CL:0000051;1.05e-12;53|ontology_enrichment_disease=DOID:2531!1.03e-48!51;DOID:0060083!1.03e-48!51;DOID:1240!1.27e-41!39;DOID:8692!6.12e-39!31;DOID:0050686!6.14e-12!137;DOID:0060058!1.59e-08!10;DOID:1036!4.94e-08!8|ontology_enrichment_disease_v019=DOID:8692;1.40e-32;31!DOID:1240;3.81e-24;39!DOID:2531;7.49e-21;51!DOID:0060083;7.49e-21;51!DOID:1036;1.38e-09;8!DOID:0060058;1.04e-07;10!DOID:74;4.95e-07;2|ontology_enrichment_disease_v019_2=DOID:2531,1.93e-36,51;DOID:0060083,1.93e-36,51;DOID:8692,4.92e-34,31;DOID:1240,8.51e-32,39;DOID:0050686,5.78e-11,137;DOID:1036,1.58e-09,8;DOID:0060058,1.08e-07,10;DOID:74,6.03e-07,2|ontology_enrichment_uberon=UBERON:0000178!5.06e-12!15;UBERON:0000179!5.06e-12!15;UBERON:0000463!5.06e-12!15;UBERON:0002384!3.87e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;4.86e-11;15!UBERON:0000179;4.86e-11;15!UBERON:0000463;4.86e-11;15!UBERON:0002390;5.92e-09;32!UBERON:0002193;1.21e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.47e-11,15;UBERON:0000179,5.47e-11,15;UBERON:0000463,5.47e-11,15;UBERON:0002384,6.65e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,196.611755072806,66.6773700366007,2.64240395401362,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,14.0796995569058,25.122376118058,14.2321480618169,8.10787422876364,21.6213832999447,22.4153451582248,19.8313461835459,21.9432363543134,5.69212969109448,7.6340834618222,3.44045905312706,2.64342657158052,2.24203425192614,7.11137028892708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.127986611154418,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,19.3177405687327,18.8758320557442,8.17206502925043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,1.52927441428475,1.70894156152249,5.71756261098694,5.34770955012053,0,1.08006287447623,5.55187623405989,0,0,0,9.29015875628594,0.865615277858669,0.142283686696828,0,0.399158742865633,0.191505370132367,7.83192256078367,0.324621940274555,17.9710193992614,0.684704037099577,2.6635582281414,2.50634477090067,2.70866844482565,3.69352572738509,1.81619736471943,2.12923118845163,3.43505344755765,0.614481528616916,0.671028323677248,0.333698283423817,16.6079881091734,1.67043704337145,0,1.89318974933188,1.33228787199128,8.45922030527097,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,30.3912307084262,0,0,7.50817313312524,0,0,0,1.53471711068062,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,33.9071831076319,6.76786981851542,8.03856390702732,7.88761458786461,0.189753732724185,21.2975015833707,0,0,0,0,3.98104772431402,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,7.28190655765746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,1.9846640872478,0,4.74991133685494,0,0,0,0,0,7.38154252376101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02714286418868,0.344429959321631,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,3.50132854320776,0,0,0.154348316215889,0,0,0,0,0,0,0,0,3.28943712929488,0.322289439867886,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,1.35636710655613,0.0620747142958579,0,0,0,0.435433495793923,0,4.57993960499195,0.143444410785353,0,0,0,0,0,0,0,0,0,2.41528552309231,0|short_description=p@chr4:51561..51600,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_at_chr4:51561..51600,- | |||
|id=chr4:51561..51600,- | |||
|ontology_enrichment_celltype=CL:0000037!9.67e-39!172;CL:0000566!9.67e-39!172;CL:0000988!1.98e-35!182;CL:0002032!1.35e-31!165;CL:0000837!1.35e-31!165;CL:0000945!7.66e-28!24;CL:0000826!7.66e-28!24;CL:0000236!1.02e-24!14;CL:0000542!3.70e-18!53;CL:0000051!3.70e-18!53;CL:0000838!5.85e-17!52;CL:0000738!2.46e-14!140;CL:0000763!3.35e-14!112;CL:0000049!3.35e-14!112;CL:0002087!4.72e-13!119;CL:0002031!2.39e-10!124;CL:0000134!2.74e-08!358;CL:0002320!8.47e-08!365;CL:0000784!5.20e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.44e-31;24!CL:0000236;2.83e-28;13!CL:0000542;1.05e-12;53!CL:0000784;1.33e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.39e-31,24;CL:0000826,6.39e-31,24;CL:0000037,9.33e-29,168;CL:0000988,1.05e-26,177;CL:0000236,4.39e-26,14;CL:0002032,4.97e-23,161;CL:0000837,4.97e-23,161;CL:0000542,8.97e-17,53;CL:0000051,8.97e-17,53;CL:0000838,3.30e-15,52;CL:0000784,1.33e-10,3;CL:0000763,1.05e-08,108;CL:0000049,1.05e-08,108;CL:0000738,8.36e-08,136;CL:0000134,9.72e-08,354;CL:0002320,2.20e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000051;1.05e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!1.03e-48!51;DOID:0060083!1.03e-48!51;DOID:1240!1.27e-41!39;DOID:8692!6.12e-39!31;DOID:0050686!6.14e-12!137;DOID:0060058!1.59e-08!10;DOID:1036!4.94e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.40e-32;31!DOID:1240;3.81e-24;39!DOID:2531;7.49e-21;51!DOID:0060083;7.49e-21;51!DOID:1036;1.38e-09;8!DOID:0060058;1.04e-07;10!DOID:74;4.95e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.93e-36,51;DOID:0060083,1.93e-36,51;DOID:8692,4.92e-34,31;DOID:1240,8.51e-32,39;DOID:0050686,5.78e-11,137;DOID:1036,1.58e-09,8;DOID:0060058,1.08e-07,10;DOID:74,6.03e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.06e-12!15;UBERON:0000179!5.06e-12!15;UBERON:0000463!5.06e-12!15;UBERON:0002384!3.87e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.86e-11;15!UBERON:0000179;4.86e-11;15!UBERON:0000463;4.86e-11;15!UBERON:0002390;5.92e-09;32!UBERON:0002193;1.21e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.47e-11,15;UBERON:0000179,5.47e-11,15;UBERON:0000463,5.47e-11,15;UBERON:0002384,6.65e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,196.611755072806,66.6773700366007,2.64240395401362,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,14.0796995569058,25.122376118058,14.2321480618169,8.10787422876364,21.6213832999447,22.4153451582248,19.8313461835459,21.9432363543134,5.69212969109448,7.6340834618222,3.44045905312706,2.64342657158052,2.24203425192614,7.11137028892708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.127986611154418,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,19.3177405687327,18.8758320557442,8.17206502925043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,1.52927441428475,1.70894156152249,5.71756261098694,5.34770955012053,0,1.08006287447623,5.55187623405989,0,0,0,9.29015875628594,0.865615277858669,0.142283686696828,0,0.399158742865633,0.191505370132367,7.83192256078367,0.324621940274555,17.9710193992614,0.684704037099577,2.6635582281414,2.50634477090067,2.70866844482565,3.69352572738509,1.81619736471943,2.12923118845163,3.43505344755765,0.614481528616916,0.671028323677248,0.333698283423817,16.6079881091734,1.67043704337145,0,1.89318974933188,1.33228787199128,8.45922030527097,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,30.3912307084262,0,0,7.50817313312524,0,0,0,1.53471711068062,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,33.9071831076319,6.76786981851542,8.03856390702732,7.88761458786461,0.189753732724185,21.2975015833707,0,0,0,0,3.98104772431402,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,7.28190655765746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,1.9846640872478,0,4.74991133685494,0,0,0,0,0,7.38154252376101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02714286418868,0.344429959321631,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,3.50132854320776,0,0,0.154348316215889,0,0,0,0,0,0,0,0,3.28943712929488,0.322289439867886,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,1.35636710655613,0.0620747142958579,0,0,0,0.435433495793923,0,4.57993960499195,0.143444410785353,0,0,0,0,0,0,0,0,0,2.41528552309231,0 | |||
|short_description=p@chr4:51561..51600,- | |||
}} |
Revision as of 11:05, 13 September 2013
Short description: | p@chr4:51561..51600, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:51561..51600, - |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.39e-31 | 24 |
pro-B cell | 6.39e-31 | 24 |
hematopoietic stem cell | 9.33e-29 | 168 |
hematopoietic cell | 1.05e-26 | 177 |
B cell | 4.39e-26 | 14 |
hematopoietic oligopotent progenitor cell | 4.97e-23 | 161 |
hematopoietic multipotent progenitor cell | 4.97e-23 | 161 |
lymphocyte | 8.97e-17 | 53 |
common lymphoid progenitor | 8.97e-17 | 53 |
lymphoid lineage restricted progenitor cell | 3.30e-15 | 52 |
plasmacytoid dendritic cell | 1.33e-10 | 3 |
myeloid cell | 1.05e-08 | 108 |
common myeloid progenitor | 1.05e-08 | 108 |
leukocyte | 8.36e-08 | 136 |
mesenchymal cell | 9.72e-08 | 354 |
connective tissue cell | 2.20e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 5.47e-11 | 15 |
haemolymphatic fluid | 5.47e-11 | 15 |
organism substance | 5.47e-11 | 15 |
connective tissue | 6.65e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.93e-36 | 51 |
immune system cancer | 1.93e-36 | 51 |
myeloid leukemia | 4.92e-34 | 31 |
leukemia | 8.51e-32 | 39 |
organ system cancer | 5.78e-11 | 137 |
chronic leukemia | 1.58e-09 | 8 |
lymphoma | 1.08e-07 | 10 |
hematopoietic system disease | 6.03e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.