FFCP PHASE1:Hg19::chr5:125691823..125691832,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C38|description=CAGE_peak_at_chr5:125691823..125691832,-|id=chr5:125691823..125691832,-|ontology_enrichment_celltype=CL:0000990!3.07e-47!8;CL:0000453!3.48e-44!5;CL:0000451!1.51e-38!10;CL:0000840!5.79e-24!5;CL:0001029!5.79e-24!5;CL:0001014!4.10e-19!2;CL:0001016!4.10e-19!2;CL:0000946!8.99e-10!1;CL:0000786!8.99e-10!1;CL:0000980!8.99e-10!1|ontology_enrichment_celltype_v019=CL:0001014;2.56e-98;2!CL:0001016;2.56e-98;2!CL:0000453;3.31e-40;5!CL:0000840;9.87e-34;5!CL:0000990;6.41e-23;8!CL:0000451;5.63e-19;10!CL:0000138;1.22e-09;6!CL:0002540;1.44e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9|ontology_enrichment_celltype_v019_2=CL:0001014,2.56e-98,2;CL:0001016,2.56e-98,2;CL:0000453,3.31e-40,5;CL:0000840,9.87e-34,5;CL:0001029,9.87e-34,5;CL:0000990,6.41e-23,8;CL:0000451,5.63e-19,10;CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0002540,1.44e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3371!1.65e-10!1;DOID:4549!1.65e-10!1;DOID:5861!1.65e-10!1;DOID:6496!1.65e-10!1|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6|ontology_enrichment_uberon=UBERON:0002372!6.91e-10!1;UBERON:0001961!6.91e-10!1;UBERON:0001744!6.91e-10!1;UBERON:0001735!6.91e-10!1|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0001474;4.31e-12;18!UBERON:0004765;1.07e-08;26|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0001434,1.11e-08,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03059922141551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.1248694577575,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:125691823..125691832,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr5:125691823..125691832,- | |||
|id=chr5:125691823..125691832,- | |||
|ontology_enrichment_celltype=CL:0000990!3.07e-47!8;CL:0000453!3.48e-44!5;CL:0000451!1.51e-38!10;CL:0000840!5.79e-24!5;CL:0001029!5.79e-24!5;CL:0001014!4.10e-19!2;CL:0001016!4.10e-19!2;CL:0000946!8.99e-10!1;CL:0000786!8.99e-10!1;CL:0000980!8.99e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.56e-98;2!CL:0001016;2.56e-98;2!CL:0000453;3.31e-40;5!CL:0000840;9.87e-34;5!CL:0000990;6.41e-23;8!CL:0000451;5.63e-19;10!CL:0000138;1.22e-09;6!CL:0002540;1.44e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.56e-98,2;CL:0001016,2.56e-98,2;CL:0000453,3.31e-40,5;CL:0000840,9.87e-34,5;CL:0001029,9.87e-34,5;CL:0000990,6.41e-23,8;CL:0000451,5.63e-19,10;CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0002540,1.44e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!1.65e-10!1;DOID:4549!1.65e-10!1;DOID:5861!1.65e-10!1;DOID:6496!1.65e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002372!6.91e-10!1;UBERON:0001961!6.91e-10!1;UBERON:0001744!6.91e-10!1;UBERON:0001735!6.91e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0001474;4.31e-12;18!UBERON:0004765;1.07e-08;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0001434,1.11e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03059922141551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,1.1248694577575,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:125691823..125691832,- | |||
}} |
Revision as of 12:56, 13 September 2013
Short description: | p@chr5:125691823..125691832, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:125691823..125691832, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.56e-98 | 2 |
immature CD1a-positive Langerhans cell | 2.56e-98 | 2 |
Langerhans cell | 3.31e-40 | 5 |
immature conventional dendritic cell | 9.87e-34 | 5 |
common dendritic progenitor | 9.87e-34 | 5 |
conventional dendritic cell | 6.41e-23 | 8 |
dendritic cell | 5.63e-19 | 10 |
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
mesenchymal stem cell of the bone marrow | 1.44e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.51e-09 | 90 |
skeletal system | 1.11e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.