FFCP PHASE1:Hg19::chr5:151051155..151051191,-: Difference between revisions
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{{FFCP | 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619,0,1.54736358051564,1.22439575525196,0,0,4.38345574152353,1.65770349318689,0,2.14764233254525,0,24.261087837621,0,0,0,2.36744173528641,2.3948309234694,2.22273980289274,0.969332746095218,1.20598527610407,0,0,0,2.89999830173917,0,0,0,0,0.291604613383254,0.868124974666461,0.885741385813839,1.08536794762867,0,1.54810963903714,1.18219047581419,1.97446857438575,0,0,6.54077197282275,0,0.23056390438806,0.897576444097721,0,5.74202087517455,23.6321790976805,10.6606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.41532103205343,6.11030144933625,0,0,0.104421949505455,1.21322039365219,16.8541305932746,2.81117334870407,0,0,0,0.394584402849391,8.46935012340647,0.30607276163049,2.21153028699708,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0,0.416024019039416,0,0,0,8.03742673913339,1.37588825977293,0,0,0,4.46149475846729,0,13.1068829652709,1.64450309576101,0.596143835108969,0.379864775735272,0,1.20238230377301,6.19013684744122,2.59752492456769,0,0,0,0,0.124252535565433,0,8.01834815834323,9.41425616810999,1.4279750469085,0.288950589901519,0,4.24406674565178,0,11.1739014769189,0,5.86493042671734,2.52076466412852,0.717873024576814,1.59743200399193,0.429226048136571,0.446342914883745,1.5452198671947,27.7430910327651,0,0,0.0824158583811665,0.0674035438541849,0,0,0.795229689809303,1.63444087333891,0.643012593860077,0.687697182986169,0,0,0,0.121499113316049,0,2.52178263357434,0.944182586429966,0,0,0,6.4322579373603,2.64836788146173,0.25426853765475,14.6609892473502,21.6055372800317,11.4305576038293,0,0,11.7567735031941,1.24643300672138,3.07759690723973,3.97520666736664,1.55139547633861,3.70251284879532,0,0,4.91222097811396,4.40172054279065,6.21358583020793,1.9846640872478,0,0,0,17.4085697078232,12.7851845951577,19.6061169128615,11.1476694441334,0,0,0.732157589411779,0.500763722825999,2.86704597845036,3.66065870071613,1.55241007353459,0,0.499921631848426,0.303298235083296,6.28023733798928,2.11739237728355,0,0,8.65677856743869,6.77768598556951,2.21922344601045,2.65164207385125,3.77351852628863,7.11848977277229,5.26332157312924,6.956622493109,6.21748802331122,3.54852359975121,6.05327715222069,1.34940933649081,3.88157392190648,3.31764966272684,10.6336685823198,10.9566462980464,14.2744728547358,14.4705980624142,6.10306099806992,7.09209770889982,6.12240175142184,3.71227007902795,11.1466848835612,4.40030541129469,9.95847545030099,9.76573517421165,6.30924491143255,6.54907423384831,3.85994864474866,1.82696004375648,2.72047110614727,3.24131464053368,2.20263034055821,11.9989523524597,3.70561736593167,7.45565768567604,1.76689145945881,3.66536672714738,2.02730928783687,0,3.10887307558079,3.3424595179512,0.138258436151731,0,0,0,8.84546591885314,0,0,0,0.320075189082423,0,2.27006381426734,0.736423801007363,0.139879507719444,0.622077260032973,0,0,0,0.109209638192014,0.169732529954025,0,1.85903646388503,0,12.4021696754833,0,0,18.3391490719156,11.0248371847152,0.128458450192919,0,0.957803154342908,2.2562800066483,1.51243017733031,0.276629009856872,0.645902582527404,1.42769420259154,0,0,1.83428598521679,0.231051332300676,25.171218300833,0,1.79024599904647,5.26472298444801,4.43751151147744,0,0.261906694481422,0.982631505060581,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,4.46590060550365,0,0,0.535701835878287,0.336283722218824,0,0.682986574053893,7.89451094447486,0.230467975111559,6.34505634918448,0.951576261675644,0.131545547125698,0,0,3.21821680687107,0.157115589916002,0,1.82631744101899,1.72742072974897,0,0.857718530119876,0,0,0.347716544605159,5.61197955311177,0.207216164163037,2.3900586793153,0,0,0.118332000730565,0.170426809518315,2.11693525095465,2.7492824225286,0,0.955538938977433,0,0,0,1.94228651156368,2.56657017140618,10.4383298820438,52.4567872503871,0,0,0,0,0.109940516745429,0,0.848915739187391,2.40415516554353,0,1.47088993052343,0,3.72986087518396,7.42616000817715,16.0609176481692,11.2151895693959,2.25561403151649,2.2560260790752,0,0,0,0,2.19100916473955,1.37618785021362,3.29681041248338,0,0.271965960763659,2.61810414204226,5.290268405154,36.8275067985084,16.1761470020996,38.5037640290172,0.756998549010474,0.218531143927391,0.886889507080059,2.44773191380756,0.26721740526556,3.49200618232411,0.752122617877125,21.9758224832894,2.14371304124943,2.48750831837634,2.37895890482359,2.98527574661373,5.71354635512977,0.258355639344024,0.744896571550295,1.79410980128981,1.46388464039779,3.84022659020617,5.660635445321,6.16019941953506,0.202056159043763,1.43444410785353,16.3003574707547,0,0.213454691755431,5.7921684686082,0,18.7712753922763,1.833621662743,13.4275738844194,0.665756774185513,3.62292828463847,0.320568492303233|short_description=p6@SPARC}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11219 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=198bp_to_ENST00000524277_5end | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_6_at_SPARC_5end | |||
|id=chr5:151051155..151051191,- | |||
|ontology_enrichment_celltype=CL:0000055!5.51e-29!180;CL:0000222!1.34e-17!119;CL:0000057!3.20e-17!75;CL:0000183!4.13e-12!59;CL:0000680!9.08e-12!57;CL:0000056!9.08e-12!57;CL:0000355!9.08e-12!57;CL:0000187!3.23e-11!54;CL:0000136!2.32e-10!15;CL:0000393!7.73e-10!60;CL:0000211!7.73e-10!60;CL:0000192!1.37e-09!42;CL:0000514!1.37e-09!42;CL:0000359!1.46e-07!32;CL:0002334!5.30e-07!12;CL:0000213!5.44e-07!57;CL:0000215!5.44e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.87e-10;13!CL:0000134;3.10e-10;55!CL:0000349;2.00e-09;19!CL:0000048;3.25e-09;58!CL:0000723;4.72e-09;61!CL:0000192;4.90e-08;43!CL:0000359;5.18e-08;32!CL:0002334;1.57e-07;12!CL:0002320;2.18e-07;188!CL:0000187;3.15e-07;55!CL:0000057;8.26e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.31e-18,121;CL:0000057,5.36e-17,76;CL:0000680,2.83e-13,58;CL:0000056,2.83e-13,58;CL:0000355,2.83e-13,58;CL:0000187,1.16e-12,55;CL:0000136,2.56e-11,15;CL:0000192,7.40e-11,43;CL:0000514,7.40e-11,43;CL:0000393,4.95e-10,61;CL:0000211,4.95e-10,61;CL:0000349,1.70e-09,19;CL:0000359,2.37e-08,32;CL:0002334,1.35e-07,12;CL:0000048,1.92e-07,427;CL:0000213,7.26e-07,58;CL:0000215,7.26e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;4.90e-08;43!CL:0000355;2.54e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.11e-17!84;UBERON:0002049!3.08e-14!79;UBERON:0007798!3.08e-14!79;UBERON:0000914!3.94e-14!83;UBERON:0002329!3.94e-14!83;UBERON:0003077!3.94e-14!83;UBERON:0003059!3.94e-14!83;UBERON:0007282!3.94e-14!83;UBERON:0009618!3.94e-14!83;UBERON:0007285!3.94e-14!83;UBERON:0004535!9.46e-14!110;UBERON:0001009!2.01e-13!113;UBERON:0004290!8.67e-13!70;UBERON:0001134!9.88e-13!61;UBERON:0002036!9.88e-13!61;UBERON:0003082!9.88e-13!61;UBERON:0000055!1.23e-12!69;UBERON:0002385!1.66e-12!63;UBERON:0001015!1.66e-12!63;UBERON:0000383!1.66e-12!63;UBERON:0001981!9.77e-12!60;UBERON:0007500!9.77e-12!60;UBERON:0004537!9.77e-12!60;UBERON:0006965!9.77e-12!60;UBERON:0005256!8.62e-11!143;UBERON:0000475!1.50e-10!365;UBERON:0003914!4.03e-10!118;UBERON:0000486!5.61e-10!82;UBERON:0001637!7.92e-10!42;UBERON:0003509!7.92e-10!42;UBERON:0004572!7.92e-10!42;UBERON:0000468!3.48e-09!659;UBERON:0000490!2.01e-08!138;UBERON:0002100!5.52e-08!216;UBERON:0004573!5.79e-08!33;UBERON:0004571!5.79e-08!33;UBERON:0000478!2.50e-07!24;UBERON:0001013!8.77e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.92e-08;42!UBERON:0003509;2.92e-08;42!UBERON:0004572;2.92e-08;42!UBERON:0002384;3.80e-08;198!UBERON:0000478;5.32e-08;24!UBERON:0004573;9.78e-08;33!UBERON:0004571;9.78e-08;33!UBERON:0001013;2.55e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.43e-17,83;UBERON:0001134,2.40e-14,62;UBERON:0002036,2.40e-14,62;UBERON:0003082,2.40e-14,62;UBERON:0002049,6.13e-14,78;UBERON:0007798,6.13e-14,78;UBERON:0007503,7.05e-14,78;UBERON:0002385,1.03e-13,64;UBERON:0001015,1.03e-13,64;UBERON:0000383,1.03e-13,64;UBERON:0007524,2.09e-13,73;UBERON:0002329,2.21e-13,71;UBERON:0003059,2.21e-13,71;UBERON:0007282,2.21e-13,71;UBERON:0004290,2.21e-13,71;UBERON:0009618,2.21e-13,71;UBERON:0003077,6.92e-13,72;UBERON:0007285,6.92e-13,72;UBERON:0000055,7.18e-13,68;UBERON:0005256,7.99e-13,122;UBERON:0004535,1.58e-12,109;UBERON:0001009,7.96e-12,112;UBERON:0007500,9.82e-12,59;UBERON:0001981,9.82e-12,59;UBERON:0004537,9.82e-12,59;UBERON:0006965,9.82e-12,59;UBERON:0000926,8.05e-11,315;UBERON:0004120,8.05e-11,315;UBERON:0006603,8.05e-11,315;UBERON:0003104,1.58e-10,160;UBERON:0009142,1.58e-10,160;UBERON:0001637,1.70e-10,42;UBERON:0003509,1.70e-10,42;UBERON:0004572,1.70e-10,42;UBERON:0003914,2.11e-10,117;UBERON:0000486,5.01e-10,83;UBERON:0000490,1.78e-09,148;UBERON:0004573,1.97e-08,33;UBERON:0004571,1.97e-08,33;UBERON:0000478,4.46e-08,24;UBERON:0001013,2.35e-07,14;UBERON:0005631,6.75e-07,14;UBERON:0000158,6.75e-07,14 | |||
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| |||
|short_description=p6@SPARC | |||
}} |
Revision as of 14:17, 13 September 2013
Short description: | p6@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SPARC_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 198bp_to_ENST00000524277_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.31e-18 | 121 |
fibroblast | 5.36e-17 | 76 |
muscle precursor cell | 2.83e-13 | 58 |
myoblast | 2.83e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.83e-13 | 58 |
muscle cell | 1.16e-12 | 55 |
fat cell | 2.56e-11 | 15 |
smooth muscle cell | 7.40e-11 | 43 |
smooth muscle myoblast | 7.40e-11 | 43 |
electrically responsive cell | 4.95e-10 | 61 |
electrically active cell | 4.95e-10 | 61 |
extraembryonic cell | 1.70e-09 | 19 |
vascular associated smooth muscle cell | 2.37e-08 | 32 |
preadipocyte | 1.35e-07 | 12 |
multi fate stem cell | 1.92e-07 | 427 |
lining cell | 7.26e-07 | 58 |
barrier cell | 7.26e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.