FFCP PHASE1:Hg19::chr6:33601476..33601496,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-63bp_to_ENST00000500794,uc010jvd.1_5end|description=CAGE_peak_1_at_ENST00000500794_5end,CAGE_peak_1_at_uc010jvd.1_5end|id=chr6:33601476..33601496,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000746;3.44e-08;7!CL:1000612;3.44e-08;7!CL:0002681;5.56e-07;12!CL:0002584;5.56e-07;12|ontology_enrichment_celltype_v019_2=CL:1000746,2.73e-08,7;CL:1000612,2.73e-08,7;CL:0002681,3.89e-07,12;CL:0002584,3.89e-07,12;CL:0002188,7.16e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.79e-07!32;UBERON:0002553!3.51e-07!70;UBERON:0000922!3.85e-07!612;UBERON:0002050!5.69e-07!605;UBERON:0005423!5.69e-07!605;UBERON:0003886!6.03e-07!63;UBERON:0002346!6.67e-07!90;UBERON:0000481!8.16e-07!347;UBERON:0000923!8.41e-07!604;UBERON:0005291!8.41e-07!604;UBERON:0006598!8.41e-07!604;UBERON:0002532!8.41e-07!604;UBERON:0001049!8.50e-07!57;UBERON:0005068!8.50e-07!57;UBERON:0006241!8.50e-07!57;UBERON:0007135!8.50e-07!57;UBERON:0003075!9.62e-07!86;UBERON:0007284!9.62e-07!86|ontology_enrichment_uberon_v019=UBERON:0000074;3.44e-08;7!UBERON:0001229;3.44e-08;7!UBERON:0001851;1.19e-07;15!UBERON:0004089;1.43e-07;2!UBERON:0003135;1.82e-07;11!UBERON:0001225;5.56e-07;12!UBERON:0008987;5.56e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0005103,8.75e-11,8;UBERON:0000083,8.75e-11,8;UBERON:0009201,8.75e-11,8;UBERON:0006553,8.75e-11,8;UBERON:0003074,8.75e-11,8;UBERON:0003060,8.75e-11,8;UBERON:0000080,1.52e-09,9;UBERON:0002120,1.52e-09,9;UBERON:0004875,1.52e-09,9;UBERON:0005721,1.52e-09,9;UBERON:0005754,1.52e-09,9;UBERON:0007297,1.52e-09,9;UBERON:0010532,2.73e-08,7;UBERON:0000074,2.73e-08,7;UBERON:0001229,2.73e-08,7;UBERON:0001230,2.73e-08,7;UBERON:0003220,2.73e-08,7;UBERON:0005749,2.73e-08,7;UBERON:0004199,2.73e-08,7;UBERON:0004209,2.73e-08,7;UBERON:0004198,2.73e-08,7;UBERON:0000058,6.28e-08,19;UBERON:0004876,9.70e-08,11;UBERON:0001851,1.01e-07,15;UBERON:0003135,1.47e-07,11;UBERON:0000489,1.57e-07,31;UBERON:0006555,2.82e-07,16;UBERON:0004819,2.82e-07,16;UBERON:0004089,3.75e-07,2;UBERON:0001225,3.89e-07,12;UBERON:0008987,3.89e-07,12;UBERON:0003887,4.61e-07,12|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0.491467873003018,2.09340350391728,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0.434539556882471,0,0.973269740605272,0.189069634328136,0.665188192387692,0.175669571386252,0.392937226493138,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0.805658634218294,0,0,0.367663080345869,0,0.446498641420399,0.898117490504679,0.337834441449967,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.937285727335186,0,0,0.448346041655403,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0.375355559615893,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0.635795703478686,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0,0,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,1.10689594688802,0,0,1.1240175325762,0,0,0.651616610620649,1.03993478527958,0,0.231860809950154,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0.880484340132261,1.03664057770386,0.576479813667846,0.6312121671319,0,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0.387815147273333,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,2.0994328148232,0,0,0,0.479249710983165,2.29723871668228,1.42636905040718,0,0.410952645100767,0.179060963239896,0,0.197030760201927,0.431255149719035,0.513372145118994,0,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0.535286966391485,0,0.117141414992713,0.902838299183157,0,0,0,0.553107505625109,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0.106727557803444,1.81876542867756,0,0.30239029332968,0,0,0,0,0.5117072490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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-63bp_to_ENST00000500794,uc010jvd.1_5end | |||
|description=CAGE_peak_1_at_ENST00000500794_5end,CAGE_peak_1_at_uc010jvd.1_5end | |||
|id=chr6:33601476..33601496,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000746;3.44e-08;7!CL:1000612;3.44e-08;7!CL:0002681;5.56e-07;12!CL:0002584;5.56e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,2.73e-08,7;CL:1000612,2.73e-08,7;CL:0002681,3.89e-07,12;CL:0002584,3.89e-07,12;CL:0002188,7.16e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.79e-07!32;UBERON:0002553!3.51e-07!70;UBERON:0000922!3.85e-07!612;UBERON:0002050!5.69e-07!605;UBERON:0005423!5.69e-07!605;UBERON:0003886!6.03e-07!63;UBERON:0002346!6.67e-07!90;UBERON:0000481!8.16e-07!347;UBERON:0000923!8.41e-07!604;UBERON:0005291!8.41e-07!604;UBERON:0006598!8.41e-07!604;UBERON:0002532!8.41e-07!604;UBERON:0001049!8.50e-07!57;UBERON:0005068!8.50e-07!57;UBERON:0006241!8.50e-07!57;UBERON:0007135!8.50e-07!57;UBERON:0003075!9.62e-07!86;UBERON:0007284!9.62e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.44e-08;7!UBERON:0001229;3.44e-08;7!UBERON:0001851;1.19e-07;15!UBERON:0004089;1.43e-07;2!UBERON:0003135;1.82e-07;11!UBERON:0001225;5.56e-07;12!UBERON:0008987;5.56e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005103,8.75e-11,8;UBERON:0000083,8.75e-11,8;UBERON:0009201,8.75e-11,8;UBERON:0006553,8.75e-11,8;UBERON:0003074,8.75e-11,8;UBERON:0003060,8.75e-11,8;UBERON:0000080,1.52e-09,9;UBERON:0002120,1.52e-09,9;UBERON:0004875,1.52e-09,9;UBERON:0005721,1.52e-09,9;UBERON:0005754,1.52e-09,9;UBERON:0007297,1.52e-09,9;UBERON:0010532,2.73e-08,7;UBERON:0000074,2.73e-08,7;UBERON:0001229,2.73e-08,7;UBERON:0001230,2.73e-08,7;UBERON:0003220,2.73e-08,7;UBERON:0005749,2.73e-08,7;UBERON:0004199,2.73e-08,7;UBERON:0004209,2.73e-08,7;UBERON:0004198,2.73e-08,7;UBERON:0000058,6.28e-08,19;UBERON:0004876,9.70e-08,11;UBERON:0001851,1.01e-07,15;UBERON:0003135,1.47e-07,11;UBERON:0000489,1.57e-07,31;UBERON:0006555,2.82e-07,16;UBERON:0004819,2.82e-07,16;UBERON:0004089,3.75e-07,2;UBERON:0001225,3.89e-07,12;UBERON:0008987,3.89e-07,12;UBERON:0003887,4.61e-07,12 | |||
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| |||
|short_description=p1@ENST00000500794,p1@uc010jvd.1 | |||
}} |
Revision as of 20:34, 13 September 2013
Short description: | p1@ENST00000500794, p1@uc010jvd.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000500794_5end, CAGE_peak_1_at_uc010jvd.1_5end |
Coexpression cluster: | NA |
Association with transcript: | -63bp_to_ENST00000500794, uc010jvd.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 2.73e-08 | 7 |
kidney corpuscule cell | 2.73e-08 | 7 |
kidney cortical cell | 3.89e-07 | 12 |
renal cortical epithelial cell | 3.89e-07 | 12 |
glomerular endothelial cell | 7.16e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mesonephric epithelium | 8.75e-11 | 8 |
mesonephric tubule | 8.75e-11 | 8 |
nephric duct | 8.75e-11 | 8 |
renal duct | 8.75e-11 | 8 |
mesonephric duct | 8.75e-11 | 8 |
pronephric duct | 8.75e-11 | 8 |
mesonephros | 1.52e-09 | 9 |
pronephros | 1.52e-09 | 9 |
nephrogenic cord | 1.52e-09 | 9 |
pronephric mesoderm | 1.52e-09 | 9 |
rostral part of nephrogenic cord | 1.52e-09 | 9 |
presumptive pronephric mesoderm | 1.52e-09 | 9 |
primitive nephron | 2.73e-08 | 7 |
renal glomerulus | 2.73e-08 | 7 |
renal corpuscle | 2.73e-08 | 7 |
glomerular capsule | 2.73e-08 | 7 |
metanephric mesenchyme | 2.73e-08 | 7 |
glomerular tuft | 2.73e-08 | 7 |
S-shaped body | 2.73e-08 | 7 |
renal vesicle | 2.73e-08 | 7 |
comma-shaped body | 2.73e-08 | 7 |
duct | 6.28e-08 | 19 |
urogenital ridge | 9.70e-08 | 11 |
cortex | 1.01e-07 | 15 |
male reproductive organ | 1.47e-07 | 11 |
cavitated compound organ | 1.57e-07 | 31 |
excretory tube | 2.82e-07 | 16 |
kidney epithelium | 2.82e-07 | 16 |
midface | 3.75e-07 | 2 |
cortex of kidney | 3.89e-07 | 12 |
renal parenchyma | 3.89e-07 | 12 |
intraembryonic coelom | 4.61e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.