FFCP PHASE1:Hg19::chr6:58777668..58777693,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C319|description=CAGE_peak_at_chr6:58777668..58777693,-|id=chr6:58777668..58777693,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;2.20e-10;2!CL:0002195;8.60e-10;2!CL:0002571;8.60e-10;2!CL:0000815;3.08e-09;2!CL:0000792;3.08e-09;2!CL:0002677;3.08e-09;2!CL:0000097;1.85e-08;5!CL:0000540;2.46e-07;6!CL:0000404;2.46e-07;6!CL:0000214;7.35e-07;3|ontology_enrichment_celltype_v019_2=CL:0000047,3.25e-14,8;CL:0002195,8.44e-10,2;CL:0002571,8.44e-10,2;CL:0000815,4.15e-09,2;CL:0000792,4.15e-09,2;CL:0002677,4.15e-09,2;CL:0000097,2.75e-08,5;CL:0002028,2.75e-08,5;CL:0000540,2.43e-07,6;CL:0000031,2.43e-07,6;CL:0000404,2.43e-07,6;CL:0000214,6.94e-07,3|ontology_enrichment_development_v019=CL:0000031;2.46e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003978;3.84e-07;3!UBERON:0000946;3.84e-07;3!UBERON:0006915;7.35e-07;3!UBERON:0007616;7.35e-07;3!UBERON:0002217;7.35e-07;3!UBERON:0002018;7.35e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.85e-07,3;UBERON:0009751,3.85e-07,3;UBERON:0000946,3.85e-07,3;UBERON:0002523,3.85e-07,3;UBERON:0005983,3.85e-07,3;UBERON:0002165,3.85e-07,3;UBERON:0002062,3.85e-07,3;UBERON:0007280,3.85e-07,3;UBERON:0006915,6.94e-07,3;UBERON:0007616,6.94e-07,3;UBERON:0002217,6.94e-07,3;UBERON:0002018,6.94e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.08099253950053,0,0,0.633765858935825,1.70083439972035,0,0.44931452458598,0.150176892841506,0.32145117339416,0,0.59675003159727,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83593247695339,1.30368906653436,0.473447805734733,0,0.111410456885174,1.17842362989935,0.664601683750863,0.541607727530031,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,1.03800594213442,1.87278579662799,0,0.226618685395132,0,0.34362744548263,2.53019692019503,0.637130828648193,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,1.30361867064741,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,6.13266549863533,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0.709336764396714,1.12135520028461,0,0.24666754841716,0,0,0,0,0,0,0,0.570471821544449,2.54062756938062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0,0,0,0.757301322732344,0,0,0,0.302256294682921,0.169560592310488,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,14.7697476670351,0,0,2.91665277507493,0,0,0.301586917234893,0,0,0,0,2.31860809950154,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.53735113621709,0.581267877027924,0,3.4486426652716,0.264145302039678,1.03664057770386,2.16179930125442,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,5.14720777169331,0,0,0.65147236858747,1.42156779497018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,3.81141936333695,19.5209780786433,2.31986643833309,2.84777651068393,6.37938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,4.09365799253363,0,0,0.771048469013278,0.887808626565635,1.8067974323038,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0.616122696835318,0,0,0.633309773357254,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.769350375349168,0,0,0,0,0.907604499126468,0.574265537996172,0,0,2.41676795730305,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.765676274967505,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,2.62357900818653,0,0.6196469961995,0,1.43411352204052,0,0,0,2.53329162357197,2.63435914367922,0,0,0.865999014529609,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.5745161103971,0,0,0,0,0,0,0.169291777801603,0,0,0,1.03051603426729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0.236387681767936,1.03423011972439,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0.69169171316418,0.0897576444097721,0,0,0.366390373607449,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,1.77912677208373,0.370691816839509,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.450970258243478,1.86638744515045,0,0.330991955875499,0,0,0,0.138674673013139,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C319 | |||
|description=CAGE_peak_at_chr6:58777668..58777693,- | |||
|id=chr6:58777668..58777693,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.20e-10;2!CL:0002195;8.60e-10;2!CL:0002571;8.60e-10;2!CL:0000815;3.08e-09;2!CL:0000792;3.08e-09;2!CL:0002677;3.08e-09;2!CL:0000097;1.85e-08;5!CL:0000540;2.46e-07;6!CL:0000404;2.46e-07;6!CL:0000214;7.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.25e-14,8;CL:0002195,8.44e-10,2;CL:0002571,8.44e-10,2;CL:0000815,4.15e-09,2;CL:0000792,4.15e-09,2;CL:0002677,4.15e-09,2;CL:0000097,2.75e-08,5;CL:0002028,2.75e-08,5;CL:0000540,2.43e-07,6;CL:0000031,2.43e-07,6;CL:0000404,2.43e-07,6;CL:0000214,6.94e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;2.46e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;3.84e-07;3!UBERON:0000946;3.84e-07;3!UBERON:0006915;7.35e-07;3!UBERON:0007616;7.35e-07;3!UBERON:0002217;7.35e-07;3!UBERON:0002018;7.35e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.85e-07,3;UBERON:0009751,3.85e-07,3;UBERON:0000946,3.85e-07,3;UBERON:0002523,3.85e-07,3;UBERON:0005983,3.85e-07,3;UBERON:0002165,3.85e-07,3;UBERON:0002062,3.85e-07,3;UBERON:0007280,3.85e-07,3;UBERON:0006915,6.94e-07,3;UBERON:0007616,6.94e-07,3;UBERON:0002217,6.94e-07,3;UBERON:0002018,6.94e-07,3 | |||
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| |||
|short_description=p@chr6:58777668..58777693,- | |||
}} |
Revision as of 21:32, 13 September 2013
Short description: | p@chr6:58777668..58777693, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:58777668..58777693, - |
Coexpression cluster: | C319_CD14_Neural_Hepatocyte_Neurons_optic_heart_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.25e-14 | 8 |
hepatic stem cell | 8.44e-10 | 2 |
hepatic mesenchymal stem cell | 8.44e-10 | 2 |
regulatory T cell | 4.15e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.15e-09 | 2 |
naive regulatory T cell | 4.15e-09 | 2 |
mast cell | 2.75e-08 | 5 |
basophil mast progenitor cell | 2.75e-08 | 5 |
neuron | 2.43e-07 | 6 |
neuroblast | 2.43e-07 | 6 |
electrically signaling cell | 2.43e-07 | 6 |
synovial cell | 6.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 3.85e-07 | 3 |
cardiac mesenchyme | 3.85e-07 | 3 |
cardial valve | 3.85e-07 | 3 |
tunica intima | 3.85e-07 | 3 |
heart layer | 3.85e-07 | 3 |
endocardium | 3.85e-07 | 3 |
endocardial cushion | 3.85e-07 | 3 |
presumptive endocardium | 3.85e-07 | 3 |
stratified squamous epithelium | 6.94e-07 | 3 |
layer of synovial tissue | 6.94e-07 | 3 |
synovial joint | 6.94e-07 | 3 |
synovial membrane of synovial joint | 6.94e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.