FFCP PHASE1:Hg19::chr6:146285576..146285585,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=257218|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19336|TSSclassifier=S|UniProt=F8WEL0,Q149N8|association_with_transcript=-17bp_to_ENST00000444767,ENST00000519632,uc003qlj.1,uc003qlk.1_5end|coexpression_cluster_id=C11|description=CAGE_peak_8_at_SHPRH_5end|id=chr6:146285576..146285585,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.06e-17!57;UBERON:0005068!1.06e-17!57;UBERON:0006241!1.06e-17!57;UBERON:0007135!1.06e-17!57;UBERON:0002616!1.57e-15!59;UBERON:0007023!1.29e-13!115;UBERON:0000955!1.13e-12!69;UBERON:0006238!1.13e-12!69;UBERON:0001869!3.38e-12!32;UBERON:0002780!5.15e-12!41;UBERON:0001890!5.15e-12!41;UBERON:0006240!5.15e-12!41;UBERON:0001017!1.32e-11!82;UBERON:0003080!1.43e-11!42;UBERON:0005743!2.77e-11!86;UBERON:0002020!3.18e-11!34;UBERON:0003528!3.18e-11!34;UBERON:0001893!3.78e-11!34;UBERON:0003075!9.67e-11!86;UBERON:0007284!9.67e-11!86;UBERON:0000073!1.33e-10!94;UBERON:0001016!1.33e-10!94;UBERON:0002791!2.36e-10!33;UBERON:0002346!8.08e-10!90;UBERON:0002619!1.85e-09!22;UBERON:0001950!4.17e-09!20;UBERON:0004733!2.43e-08!12;UBERON:0002028!2.43e-08!12;UBERON:0007277!2.43e-08!12;UBERON:0003056!2.95e-08!61;UBERON:0000033!5.24e-08!123;UBERON:0000956!6.62e-08!25;UBERON:0000203!6.62e-08!25;UBERON:0003076!1.06e-07!15;UBERON:0003057!1.06e-07!15;UBERON:0004732!1.58e-07!13;UBERON:0000153!3.74e-07!129;UBERON:0007811!3.74e-07!129|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.422008249231538,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0.120596438625408,1.52581736317083,3.20679853800551,0.886642856860642,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0.451191321234361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0,0.0969890164884194,0.176512253383001,0.225980740780532,0,0.19871461170299,0.0633107959558787,0.195551382734803,0.240476460754601,0,0,0.144090417154106,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=257218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19336 | |||
|TSSclassifier=S | |||
|UniProt=F8WEL0,Q149N8 | |||
|association_with_transcript=-17bp_to_ENST00000444767,ENST00000519632,uc003qlj.1,uc003qlk.1_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_8_at_SHPRH_5end | |||
|id=chr6:146285576..146285585,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-131;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-17!57;UBERON:0005068!1.06e-17!57;UBERON:0006241!1.06e-17!57;UBERON:0007135!1.06e-17!57;UBERON:0002616!1.57e-15!59;UBERON:0007023!1.29e-13!115;UBERON:0000955!1.13e-12!69;UBERON:0006238!1.13e-12!69;UBERON:0001869!3.38e-12!32;UBERON:0002780!5.15e-12!41;UBERON:0001890!5.15e-12!41;UBERON:0006240!5.15e-12!41;UBERON:0001017!1.32e-11!82;UBERON:0003080!1.43e-11!42;UBERON:0005743!2.77e-11!86;UBERON:0002020!3.18e-11!34;UBERON:0003528!3.18e-11!34;UBERON:0001893!3.78e-11!34;UBERON:0003075!9.67e-11!86;UBERON:0007284!9.67e-11!86;UBERON:0000073!1.33e-10!94;UBERON:0001016!1.33e-10!94;UBERON:0002791!2.36e-10!33;UBERON:0002346!8.08e-10!90;UBERON:0002619!1.85e-09!22;UBERON:0001950!4.17e-09!20;UBERON:0004733!2.43e-08!12;UBERON:0002028!2.43e-08!12;UBERON:0007277!2.43e-08!12;UBERON:0003056!2.95e-08!61;UBERON:0000033!5.24e-08!123;UBERON:0000956!6.62e-08!25;UBERON:0000203!6.62e-08!25;UBERON:0003076!1.06e-07!15;UBERON:0003057!1.06e-07!15;UBERON:0004732!1.58e-07!13;UBERON:0000153!3.74e-07!129;UBERON:0007811!3.74e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.83e-66;6!UBERON:0002680;9.75e-45;9!UBERON:0001895;9.75e-45;9!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-66,6;UBERON:0006215,2.83e-66,6;UBERON:0002680,9.75e-45,9;UBERON:0001895,9.75e-45,9;UBERON:0010092,9.75e-45,9;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p8@SHPRH | |||
}} |
Revision as of 18:34, 13 September 2013
Short description: | p8@SHPRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SHPRH_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -17bp_to_ENST00000444767, ENST00000519632, uc003qlj.1, uc003qlk.1_5end |
EntrezGene: | SHPRH |
HGNC: | 19336 |
UniProt: | F8WEL0Q149N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-66 | 6 |
rhombic lip | 2.83e-66 | 6 |
regional part of metencephalon | 9.75e-45 | 9 |
metencephalon | 9.75e-45 | 9 |
future metencephalon | 9.75e-45 | 9 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.