FFCP PHASE1:Hg19::chr7:134212312..134212329,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57016|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=382|TSSclassifier=S|UniProt=O60218|association_with_transcript=-14bp_to_ENST00000359579,NM_020299,uc003vrr.2_5end|coexpression_cluster_id=C4653|description=CAGE_peak_1_at_AKR1B10_5end|id=chr7:134212312..134212329,+|ontology_enrichment_celltype=CL:0000066!6.65e-15!254;CL:0000223!6.17e-11!59;CL:0000077!5.04e-10!19;CL:0002076!5.09e-08!43|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000223,1.83e-07,58|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!3.05e-15!106;DOID:0050687!3.64e-13!143;DOID:162!2.44e-07!235;DOID:14566!2.54e-07!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!2.28e-20!155;UBERON:0001555!2.28e-20!155;UBERON:0007026!2.28e-20!155;UBERON:0004119!2.61e-19!169;UBERON:0000925!2.61e-19!169;UBERON:0006595!2.61e-19!169;UBERON:0004921!2.85e-18!129;UBERON:0004185!2.85e-18!129;UBERON:0005911!3.04e-14!82;UBERON:0000077!1.66e-13!130;UBERON:0003929!1.01e-12!54;UBERON:0000161!9.74e-11!35;UBERON:0001004!2.17e-10!72;UBERON:0005153!2.85e-10!37;UBERON:0000065!4.32e-10!53;UBERON:0001041!2.23e-09!98;UBERON:0002367!7.02e-09!11;UBERON:0010147!7.02e-09!11;UBERON:0009846!7.02e-09!11;UBERON:0003353!7.02e-09!11;UBERON:0004902!7.02e-09!11;UBERON:0003820!7.02e-09!11;UBERON:0009847!7.02e-09!11;UBERON:0000072!7.37e-09!46;UBERON:0000162!3.25e-08!14;UBERON:0001353!3.25e-08!14;UBERON:0000163!3.25e-08!14;UBERON:0006866!3.25e-08!14;UBERON:0000164!3.25e-08!14;UBERON:0000931!3.25e-08!14;UBERON:0005157!3.40e-08!51;UBERON:0003937!5.94e-08!12;UBERON:0005399!5.94e-08!12;UBERON:0003104!7.31e-08!238;UBERON:0009142!7.31e-08!238;UBERON:0004122!1.70e-07!15;UBERON:0004807!5.66e-07!28;UBERON:0000481!6.00e-07!347|ontology_enrichment_uberon_v019=UBERON:0004921;1.05e-10;33!UBERON:0002108;5.14e-08;4!UBERON:0005178;1.17e-07;34!UBERON:0002224;1.17e-07;34!UBERON:0000160;1.66e-07;17!UBERON:0005181;5.22e-07;35!UBERON:0001555;9.18e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.47e-15,118;UBERON:0001007,5.68e-15,145;UBERON:0001555,5.68e-15,145;UBERON:0007026,5.68e-15,145;UBERON:0004119,5.75e-13,160;UBERON:0000925,5.75e-13,160;UBERON:0006595,5.75e-13,160;UBERON:0001041,7.36e-11,87;UBERON:0005178,2.93e-08,34;UBERON:0002224,2.93e-08,34;UBERON:0011216,3.31e-08,223;UBERON:0002108,5.27e-08,4;UBERON:0005181,5.59e-08,35;UBERON:0001004,1.42e-07,74;UBERON:0000160,1.60e-07,17;UBERON:0000072,8.46e-07,47;UBERON:0005177,8.92e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0.966304265816484,0.545492241181669,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0.435758888184812,0.237270619111097,0.269662616320329,0,0,0,0,0,0,1.26755034821831,0,0,0,0.368965315629341,0,0.548751427043128,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,0.335964256397719,0.567100388969546,0.447792613514241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,1.48418066444991,0,0,0.0821271560138091,0.519254429183621,0,0,0.40101294060657,0.0920809889358963,0.574072240823034,0.182091168006717,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.255225424989168,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0.577332676353072,2.01090682660736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80135675265481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.269605053441981,4.83357171624145,0,1.479651084554,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,4.95727842751532,0,0,0,0,0,0,0,0,5.43752602686553,0.307801034015188,0,0,0.987334088507493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.23840590304675,3.05515072466813,0,0,0,0,0,0,0,0.19566461893209,0,0,6.04953580243319,0,0.126373159256976,0,0,0,0,0,0,11.3843818411917,0,0,0.48996198707188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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57016 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=382 | |||
|TSSclassifier=S | |||
|UniProt=O60218 | |||
|association_with_transcript=-14bp_to_ENST00000359579,NM_020299,uc003vrr.2_5end | |||
|coexpression_cluster_id=C4653 | |||
|description=CAGE_peak_1_at_AKR1B10_5end | |||
|id=chr7:134212312..134212329,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.65e-15!254;CL:0000223!6.17e-11!59;CL:0000077!5.04e-10!19;CL:0002076!5.09e-08!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.83e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.05e-15!106;DOID:0050687!3.64e-13!143;DOID:162!2.44e-07!235;DOID:14566!2.54e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!2.28e-20!155;UBERON:0001555!2.28e-20!155;UBERON:0007026!2.28e-20!155;UBERON:0004119!2.61e-19!169;UBERON:0000925!2.61e-19!169;UBERON:0006595!2.61e-19!169;UBERON:0004921!2.85e-18!129;UBERON:0004185!2.85e-18!129;UBERON:0005911!3.04e-14!82;UBERON:0000077!1.66e-13!130;UBERON:0003929!1.01e-12!54;UBERON:0000161!9.74e-11!35;UBERON:0001004!2.17e-10!72;UBERON:0005153!2.85e-10!37;UBERON:0000065!4.32e-10!53;UBERON:0001041!2.23e-09!98;UBERON:0002367!7.02e-09!11;UBERON:0010147!7.02e-09!11;UBERON:0009846!7.02e-09!11;UBERON:0003353!7.02e-09!11;UBERON:0004902!7.02e-09!11;UBERON:0003820!7.02e-09!11;UBERON:0009847!7.02e-09!11;UBERON:0000072!7.37e-09!46;UBERON:0000162!3.25e-08!14;UBERON:0001353!3.25e-08!14;UBERON:0000163!3.25e-08!14;UBERON:0006866!3.25e-08!14;UBERON:0000164!3.25e-08!14;UBERON:0000931!3.25e-08!14;UBERON:0005157!3.40e-08!51;UBERON:0003937!5.94e-08!12;UBERON:0005399!5.94e-08!12;UBERON:0003104!7.31e-08!238;UBERON:0009142!7.31e-08!238;UBERON:0004122!1.70e-07!15;UBERON:0004807!5.66e-07!28;UBERON:0000481!6.00e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.05e-10;33!UBERON:0002108;5.14e-08;4!UBERON:0005178;1.17e-07;34!UBERON:0002224;1.17e-07;34!UBERON:0000160;1.66e-07;17!UBERON:0005181;5.22e-07;35!UBERON:0001555;9.18e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.47e-15,118;UBERON:0001007,5.68e-15,145;UBERON:0001555,5.68e-15,145;UBERON:0007026,5.68e-15,145;UBERON:0004119,5.75e-13,160;UBERON:0000925,5.75e-13,160;UBERON:0006595,5.75e-13,160;UBERON:0001041,7.36e-11,87;UBERON:0005178,2.93e-08,34;UBERON:0002224,2.93e-08,34;UBERON:0011216,3.31e-08,223;UBERON:0002108,5.27e-08,4;UBERON:0005181,5.59e-08,35;UBERON:0001004,1.42e-07,74;UBERON:0000160,1.60e-07,17;UBERON:0000072,8.46e-07,47;UBERON:0005177,8.92e-07,101 | |||
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|short_description=p1@AKR1B10 | |||
}} |
Revision as of 23:20, 13 September 2013
Short description: | p1@AKR1B10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AKR1B10_5end |
Coexpression cluster: | C4653_large_lung_glioblastoma_hepatoma_mesothelioma_endometrial_pleomorphic |
Association with transcript: | -14bp_to_ENST00000359579, NM_020299, uc003vrr.2_5end |
EntrezGene: | AKR1B10 |
HGNC: | 382 |
UniProt: | O60218 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.83e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 3.47e-15 | 118 |
digestive system | 5.68e-15 | 145 |
digestive tract | 5.68e-15 | 145 |
primitive gut | 5.68e-15 | 145 |
endoderm-derived structure | 5.75e-13 | 160 |
endoderm | 5.75e-13 | 160 |
presumptive endoderm | 5.75e-13 | 160 |
foregut | 7.36e-11 | 87 |
thoracic cavity element | 2.93e-08 | 34 |
thoracic cavity | 2.93e-08 | 34 |
organ system subdivision | 3.31e-08 | 223 |
small intestine | 5.27e-08 | 4 |
thoracic segment organ | 5.59e-08 | 35 |
respiratory system | 1.42e-07 | 74 |
intestine | 1.60e-07 | 17 |
segment of respiratory tract | 8.46e-07 | 47 |
trunk region element | 8.92e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.