FFCP PHASE1:Hg19::chr8:72755345..72755349,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9242|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7321|TSSclassifier=S|UniProt=|association_with_transcript=-118bp_to_ENST00000518440_5end|coexpression_cluster_id=C0|description=CAGE_peak_14_at_MSC_5end|id=chr8:72755345..72755349,-|ontology_enrichment_celltype=CL:0002057!2.59e-24!42;CL:0000860!6.04e-22!45;CL:0002194!1.87e-15!63;CL:0000576!1.87e-15!63;CL:0000040!1.87e-15!63;CL:0000559!1.87e-15!63;CL:0002009!1.19e-14!65;CL:0000723!6.51e-13!436;CL:0000839!7.47e-13!70;CL:0000766!8.16e-13!76;CL:0000034!1.07e-12!444;CL:0000048!1.23e-12!430;CL:0000557!1.58e-12!71;CL:0000134!5.93e-07!358;CL:0000144!6.24e-07!625;CL:0002371!8.39e-07!591|ontology_enrichment_celltype_v019=CL:0000860;4.86e-61;33!CL:0002057;4.86e-61;33!CL:0000473;1.22e-40;39!CL:0000234;1.22e-40;39!CL:0000576;2.53e-31;48!CL:0000766;2.50e-16;69!CL:0000569;4.68e-12;4!CL:0002087;2.68e-08;104!CL:0000763;3.60e-07;100!CL:0000136;8.98e-07;13|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-57,42;CL:0002057,1.71e-57,42;CL:0000473,1.07e-49,48;CL:0000234,1.07e-49,48;CL:0002194,8.92e-39,59;CL:0000576,8.92e-39,59;CL:0000040,8.92e-39,59;CL:0000559,8.92e-39,59;CL:0002009,2.29e-37,61;CL:0000839,3.27e-34,66;CL:0000557,1.23e-33,67;CL:0000766,5.38e-31,72;CL:0000763,3.88e-19,108;CL:0000049,3.88e-19,108;CL:0002087,1.09e-17,115;CL:0002031,9.35e-17,120;CL:0000738,3.13e-14,136;CL:0000134,8.91e-13,354;CL:0002320,2.14e-12,361;CL:0000569,5.16e-12,4;CL:0000011,5.16e-12,4;CL:0002032,2.72e-11,161;CL:0000837,2.72e-11,161;CL:0000219,4.73e-11,386;CL:0000037,1.26e-10,168;CL:0000988,7.53e-10,177;CL:0000034,9.51e-10,441;CL:0000048,2.10e-09,427;CL:0000723,3.54e-09,433|ontology_enrichment_development_v019=CL:0002057;1.37e-40;42!CL:0000011;4.68e-12;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!2.37e-12!167;UBERON:0002193!1.12e-10!112;UBERON:0002405!2.96e-10!115;UBERON:0002371!5.41e-10!80;UBERON:0001474!2.30e-09!86;UBERON:0002390!3.46e-09!102;UBERON:0003061!3.46e-09!102;UBERON:0000926!4.55e-09!448;UBERON:0004120!4.55e-09!448;UBERON:0006603!4.55e-09!448;UBERON:0003081!4.69e-09!216;UBERON:0004765!1.76e-08!101;UBERON:0001434!1.76e-08!101;UBERON:0000948!1.46e-07!24;UBERON:0005498!1.46e-07!24;UBERON:0004140!1.46e-07!24;UBERON:0009881!1.46e-07!24;UBERON:0004141!1.46e-07!24;UBERON:0003084!1.46e-07!24;UBERON:0007005!1.46e-07!24;UBERON:0004139!1.46e-07!24;UBERON:0004291!1.46e-07!24|ontology_enrichment_uberon_v019=UBERON:0001282;9.74e-07;1!UBERON:0009842;9.74e-07;1!UBERON:0003704;9.74e-07;1!UBERON:0001171;9.74e-07;1!UBERON:0001172;9.74e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.95e-29,76;UBERON:0001474,1.14e-26,82;UBERON:0002405,2.64e-25,93;UBERON:0004765,6.82e-24,90;UBERON:0001434,3.50e-23,100;UBERON:0002390,1.45e-21,98;UBERON:0003061,1.45e-21,98;UBERON:0002193,4.03e-21,108;UBERON:0003081,2.41e-13,203;UBERON:0002204,6.40e-12,167;UBERON:0002384,7.10e-12,371;UBERON:0000926,5.73e-09,315;UBERON:0004120,5.73e-09,315;UBERON:0006603,5.73e-09,315|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,2.60707781711184,0.217010870715852,0,0,0,0.145398238779565,0,0.485168122375632,2.78914844286822,3.28934310417461,2.47765096716083,2.3015391385772,0.768482119587302,2.12834006899727,1.72372840368309,2.5819387343353,2.70852973188684,0.941211697713023,1.36453075028923,2.69668181334102,4.28517449319264,3.53021929783703,0.639337125799041,0.659702600373432,0.199463657621632,0,22.0559021357724,11.3477044938228,9.9651559839292,1.25624332628372,1.0429658368404,1.08594422352558,11.502590550034,15.8359383474653,19.6206680213348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0,0,0,0,0.49333509683432,0,0.404132016209064,0.326923806226917,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0.153461973288062,0,0.25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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7321 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-118bp_to_ENST00000518440_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_14_at_MSC_5end | |||
|id=chr8:72755345..72755349,- | |||
|ontology_enrichment_celltype=CL:0002057!2.59e-24!42;CL:0000860!6.04e-22!45;CL:0002194!1.87e-15!63;CL:0000576!1.87e-15!63;CL:0000040!1.87e-15!63;CL:0000559!1.87e-15!63;CL:0002009!1.19e-14!65;CL:0000723!6.51e-13!436;CL:0000839!7.47e-13!70;CL:0000766!8.16e-13!76;CL:0000034!1.07e-12!444;CL:0000048!1.23e-12!430;CL:0000557!1.58e-12!71;CL:0000134!5.93e-07!358;CL:0000144!6.24e-07!625;CL:0002371!8.39e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.86e-61;33!CL:0002057;4.86e-61;33!CL:0000473;1.22e-40;39!CL:0000234;1.22e-40;39!CL:0000576;2.53e-31;48!CL:0000766;2.50e-16;69!CL:0000569;4.68e-12;4!CL:0002087;2.68e-08;104!CL:0000763;3.60e-07;100!CL:0000136;8.98e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-57,42;CL:0002057,1.71e-57,42;CL:0000473,1.07e-49,48;CL:0000234,1.07e-49,48;CL:0002194,8.92e-39,59;CL:0000576,8.92e-39,59;CL:0000040,8.92e-39,59;CL:0000559,8.92e-39,59;CL:0002009,2.29e-37,61;CL:0000839,3.27e-34,66;CL:0000557,1.23e-33,67;CL:0000766,5.38e-31,72;CL:0000763,3.88e-19,108;CL:0000049,3.88e-19,108;CL:0002087,1.09e-17,115;CL:0002031,9.35e-17,120;CL:0000738,3.13e-14,136;CL:0000134,8.91e-13,354;CL:0002320,2.14e-12,361;CL:0000569,5.16e-12,4;CL:0000011,5.16e-12,4;CL:0002032,2.72e-11,161;CL:0000837,2.72e-11,161;CL:0000219,4.73e-11,386;CL:0000037,1.26e-10,168;CL:0000988,7.53e-10,177;CL:0000034,9.51e-10,441;CL:0000048,2.10e-09,427;CL:0000723,3.54e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-40;42!CL:0000011;4.68e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.37e-12!167;UBERON:0002193!1.12e-10!112;UBERON:0002405!2.96e-10!115;UBERON:0002371!5.41e-10!80;UBERON:0001474!2.30e-09!86;UBERON:0002390!3.46e-09!102;UBERON:0003061!3.46e-09!102;UBERON:0000926!4.55e-09!448;UBERON:0004120!4.55e-09!448;UBERON:0006603!4.55e-09!448;UBERON:0003081!4.69e-09!216;UBERON:0004765!1.76e-08!101;UBERON:0001434!1.76e-08!101;UBERON:0000948!1.46e-07!24;UBERON:0005498!1.46e-07!24;UBERON:0004140!1.46e-07!24;UBERON:0009881!1.46e-07!24;UBERON:0004141!1.46e-07!24;UBERON:0003084!1.46e-07!24;UBERON:0007005!1.46e-07!24;UBERON:0004139!1.46e-07!24;UBERON:0004291!1.46e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;9.74e-07;1!UBERON:0009842;9.74e-07;1!UBERON:0003704;9.74e-07;1!UBERON:0001171;9.74e-07;1!UBERON:0001172;9.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.95e-29,76;UBERON:0001474,1.14e-26,82;UBERON:0002405,2.64e-25,93;UBERON:0004765,6.82e-24,90;UBERON:0001434,3.50e-23,100;UBERON:0002390,1.45e-21,98;UBERON:0003061,1.45e-21,98;UBERON:0002193,4.03e-21,108;UBERON:0003081,2.41e-13,203;UBERON:0002204,6.40e-12,167;UBERON:0002384,7.10e-12,371;UBERON:0000926,5.73e-09,315;UBERON:0004120,5.73e-09,315;UBERON:0006603,5.73e-09,315 | |||
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|short_description=p14@MSC | |||
}} |
Revision as of 05:59, 14 September 2013
Short description: | p14@MSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_MSC_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -118bp_to_ENST00000518440_5end |
EntrezGene: | MSC |
HGNC: | 7321 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.71e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-57 | 42 |
defensive cell | 1.07e-49 | 48 |
phagocyte | 1.07e-49 | 48 |
monopoietic cell | 8.92e-39 | 59 |
monocyte | 8.92e-39 | 59 |
monoblast | 8.92e-39 | 59 |
promonocyte | 8.92e-39 | 59 |
macrophage dendritic cell progenitor | 2.29e-37 | 61 |
myeloid lineage restricted progenitor cell | 3.27e-34 | 66 |
granulocyte monocyte progenitor cell | 1.23e-33 | 67 |
myeloid leukocyte | 5.38e-31 | 72 |
myeloid cell | 3.88e-19 | 108 |
common myeloid progenitor | 3.88e-19 | 108 |
nongranular leukocyte | 1.09e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 9.35e-17 | 120 |
leukocyte | 3.13e-14 | 136 |
mesenchymal cell | 8.91e-13 | 354 |
connective tissue cell | 2.14e-12 | 361 |
cardiac mesenchymal cell | 5.16e-12 | 4 |
migratory trunk neural crest cell | 5.16e-12 | 4 |
hematopoietic oligopotent progenitor cell | 2.72e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.72e-11 | 161 |
motile cell | 4.73e-11 | 386 |
hematopoietic stem cell | 1.26e-10 | 168 |
hematopoietic cell | 7.53e-10 | 177 |
stem cell | 9.51e-10 | 441 |
multi fate stem cell | 2.10e-09 | 427 |
somatic stem cell | 3.54e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.95e-29 | 76 |
bone element | 1.14e-26 | 82 |
immune system | 2.64e-25 | 93 |
skeletal element | 6.82e-24 | 90 |
skeletal system | 3.50e-23 | 100 |
hematopoietic system | 1.45e-21 | 98 |
blood island | 1.45e-21 | 98 |
hemolymphoid system | 4.03e-21 | 108 |
lateral plate mesoderm | 2.41e-13 | 203 |
musculoskeletal system | 6.40e-12 | 167 |
connective tissue | 7.10e-12 | 371 |
mesoderm | 5.73e-09 | 315 |
mesoderm-derived structure | 5.73e-09 | 315 |
presumptive mesoderm | 5.73e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.