FFCP PHASE1:Hg19::chr9:135037160..135037174,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84628|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14288|TSSclassifier=S|UniProt=A6NMX7,Q5JUJ3,Q96CW9,O95898|association_with_transcript=-159bp_to_ENST00000360670,ENST00000372179,ENST00000393228,ENST00000393229,ENST00000467453,NM_032536,uc004cbh.2_5end|coexpression_cluster_id=C24|description=CAGE_peak_6_at_NTNG2_5end|id=chr9:135037160..135037174,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;2.18e-38;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;2.18e-08;4|ontology_enrichment_disease_v019_2=DOID:5409,2.26e-08,4|ontology_enrichment_uberon=UBERON:0005743!2.50e-11!86;UBERON:0000955!1.54e-10!69;UBERON:0006238!1.54e-10!69;UBERON:0001017!5.70e-10!82;UBERON:0000073!1.29e-09!94;UBERON:0001016!1.29e-09!94;UBERON:0001049!5.68e-08!57;UBERON:0005068!5.68e-08!57;UBERON:0006241!5.68e-08!57;UBERON:0007135!5.68e-08!57;UBERON:0003075!1.05e-07!86;UBERON:0007284!1.05e-07!86;UBERON:0002616!1.47e-07!59;UBERON:0000033!3.47e-07!123;UBERON:0002346!4.03e-07!90;UBERON:0003056!8.78e-07!61|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0000966;1.61e-23;5!UBERON:0005388;1.61e-23;5!UBERON:0001802;1.61e-23;5!UBERON:0001894;2.46e-17;7!UBERON:0000970;1.97e-13;20!UBERON:0002104;7.89e-13;21!UBERON:0000020;8.88e-12;23!UBERON:0001032;2.56e-11;24!UBERON:0004456;2.56e-11;24!UBERON:0000019;6.38e-07;19!UBERON:0000047;6.38e-07;19!UBERON:0004088;6.38e-07;19!UBERON:0010230;6.38e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0000966,8.63e-20,6;UBERON:0005388,8.63e-20,6;UBERON:0001802,8.63e-20,6;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0000970,7.73e-13,21;UBERON:0002104,7.73e-13,21;UBERON:0000020,2.52e-11,24;UBERON:0001032,2.52e-11,24;UBERON:0004456,2.52e-11,24;UBERON:0003056,8.01e-08,61|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.869079113764942,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,2.19537308576098,0,0.423347165447766,0.324621940274555,0.280797178113459,0,0.313359791546046,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.202203398942031,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,9.94315259434343,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84628 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14288 | |||
|TSSclassifier=S | |||
|UniProt=A6NMX7,Q5JUJ3,Q96CW9,O95898 | |||
|association_with_transcript=-159bp_to_ENST00000360670,ENST00000372179,ENST00000393228,ENST00000393229,ENST00000467453,NM_032536,uc004cbh.2_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_6_at_NTNG2_5end | |||
|id=chr9:135037160..135037174,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.18e-38;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.18e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.50e-11!86;UBERON:0000955!1.54e-10!69;UBERON:0006238!1.54e-10!69;UBERON:0001017!5.70e-10!82;UBERON:0000073!1.29e-09!94;UBERON:0001016!1.29e-09!94;UBERON:0001049!5.68e-08!57;UBERON:0005068!5.68e-08!57;UBERON:0006241!5.68e-08!57;UBERON:0007135!5.68e-08!57;UBERON:0003075!1.05e-07!86;UBERON:0007284!1.05e-07!86;UBERON:0002616!1.47e-07!59;UBERON:0000033!3.47e-07!123;UBERON:0002346!4.03e-07!90;UBERON:0003056!8.78e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.13e-57;2!UBERON:0002757;1.13e-57;2!UBERON:0010134;1.13e-57;2!UBERON:0005408;1.13e-57;2!UBERON:0001899;1.13e-57;2!UBERON:0003296;1.78e-29;4!UBERON:0010133;1.78e-29;4!UBERON:0002784;1.78e-29;4!UBERON:0000966;1.61e-23;5!UBERON:0005388;1.61e-23;5!UBERON:0001802;1.61e-23;5!UBERON:0001894;2.46e-17;7!UBERON:0000970;1.97e-13;20!UBERON:0002104;7.89e-13;21!UBERON:0000020;8.88e-12;23!UBERON:0001032;2.56e-11;24!UBERON:0004456;2.56e-11;24!UBERON:0000019;6.38e-07;19!UBERON:0000047;6.38e-07;19!UBERON:0004088;6.38e-07;19!UBERON:0010230;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.13e-57,2;UBERON:0002757,1.13e-57,2;UBERON:0010134,1.13e-57,2;UBERON:0005408,1.13e-57,2;UBERON:0001899,1.13e-57,2;UBERON:0003296,1.78e-29,4;UBERON:0010133,1.78e-29,4;UBERON:0002784,1.78e-29,4;UBERON:0000966,8.63e-20,6;UBERON:0005388,8.63e-20,6;UBERON:0001802,8.63e-20,6;UBERON:0001894,2.46e-17,7;UBERON:0006222,2.46e-17,7;UBERON:0000970,7.73e-13,21;UBERON:0002104,7.73e-13,21;UBERON:0000020,2.52e-11,24;UBERON:0001032,2.52e-11,24;UBERON:0004456,2.52e-11,24;UBERON:0003056,8.01e-08,61 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.869079113764942,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.430234056612155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,2.19537308576098,0,0.423347165447766,0.324621940274555,0.280797178113459,0,0.313359791546046,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0.202203398942031,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,9.94315259434343,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,17.6781605839835,19.168172166473,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,12.7943014076215,8.53273503356724,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,9.23500340661605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@NTNG2 | |||
}} |
Revision as of 07:56, 14 September 2013
Short description: | p6@NTNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NTNG2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -159bp_to_ENST00000360670, ENST00000372179, ENST00000393228, ENST00000393229, ENST00000467453, NM_032536, uc004cbh.2_5end |
EntrezGene: | NTNG2 |
HGNC: | 14288 |
UniProt: | A6NMX7Q5JUJ3Q96CW9O95898 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.13e-57 | 2 |
regional part of epithalamus | 1.13e-57 | 2 |
secretory circumventricular organ | 1.13e-57 | 2 |
circumventricular organ | 1.13e-57 | 2 |
epithalamus | 1.13e-57 | 2 |
gland of diencephalon | 1.78e-29 | 4 |
neuroendocrine gland | 1.78e-29 | 4 |
regional part of diencephalon | 1.78e-29 | 4 |
retina | 8.63e-20 | 6 |
photoreceptor array | 8.63e-20 | 6 |
posterior segment of eyeball | 8.63e-20 | 6 |
diencephalon | 2.46e-17 | 7 |
future diencephalon | 2.46e-17 | 7 |
eye | 7.73e-13 | 21 |
visual system | 7.73e-13 | 21 |
sense organ | 2.52e-11 | 24 |
sensory system | 2.52e-11 | 24 |
entire sense organ system | 2.52e-11 | 24 |
pre-chordal neural plate | 8.01e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.26e-08 | 4 |
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