FFCP PHASE1:Hg19::chr10:118897825..118897837,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11023 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12660 | |||
|TSSclassifier=strong | |||
|UniProt=Q5SQQ9 | |||
|association_with_transcript=-13bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | |||
|description=CAGE_peak_6_at_VAX1_5end | |||
|id=chr10:118897825..118897837,- | |||
|ontology_enrichment_celltype=CL:0002605!8.59e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:1000415;7.78e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,7.03e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.07e-14;1!UBERON:0005425;1.07e-14;1!UBERON:0006238;2.07e-11;10 | |||
|ontology_enrichment_disease=DOID:171!5.37e-09!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!8.99e-61!41;UBERON:0001890!8.99e-61!41;UBERON:0006240!8.99e-61!41;UBERON:0003080!4.01e-59!42;UBERON:0001893!4.25e-57!34;UBERON:0002791!6.36e-55!33;UBERON:0001869!9.55e-53!32;UBERON:0002020!1.23e-52!34;UBERON:0003528!1.23e-52!34;UBERON:0001017!5.09e-52!82;UBERON:0000073!1.35e-50!94;UBERON:0001016!1.35e-50!94;UBERON:0001049!3.03e-49!57;UBERON:0005068!3.03e-49!57;UBERON:0006241!3.03e-49!57;UBERON:0007135!3.03e-49!57;UBERON:0000955!4.23e-49!69;UBERON:0006238!4.23e-49!69;UBERON:0005743!4.61e-49!86;UBERON:0002616!3.04e-47!59;UBERON:0002346!1.66e-41!90;UBERON:0003056!2.67e-40!61;UBERON:0000956!7.32e-38!25;UBERON:0000203!7.32e-38!25;UBERON:0003075!6.37e-35!86;UBERON:0007284!6.37e-35!86;UBERON:0000924!1.87e-32!173;UBERON:0006601!1.87e-32!173;UBERON:0002619!7.65e-32!22;UBERON:0001950!1.18e-31!20;UBERON:0004121!1.37e-27!169;UBERON:0000033!1.26e-25!123;UBERON:0000153!6.47e-24!129;UBERON:0007811!6.47e-24!129;UBERON:0007023!2.11e-22!115;UBERON:0009663!2.62e-16!7;UBERON:0002420!3.89e-16!9;UBERON:0007245!3.89e-16!9;UBERON:0010009!3.89e-16!9;UBERON:0010011!3.89e-16!9;UBERON:0000454!3.89e-16!9;UBERON:0002308!5.56e-16!9;UBERON:0000125!5.56e-16!9;UBERON:0001872!2.29e-13!5;UBERON:0000025!4.48e-13!194;UBERON:0000200!5.80e-11!6;UBERON:0004111!2.20e-10!241;UBERON:0000369!4.49e-10!4;UBERON:0002435!4.49e-10!4;UBERON:0000204!4.49e-10!4;UBERON:0010082!4.49e-10!4;UBERON:0002021!1.34e-08!5;UBERON:0005383!4.79e-08!3;UBERON:0005382!4.79e-08!3;UBERON:0000483!9.60e-08!309;UBERON:0001871!1.22e-07!7;UBERON:0000477!1.39e-07!286;UBERON:0000119!1.46e-07!312;UBERON:0000064!1.63e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.07e-14;1!UBERON:0001785;1.07e-14;1!UBERON:0002464;1.07e-14;1!UBERON:0004904;1.07e-14;1!UBERON:0001021;1.07e-14;1!UBERON:0002346;1.72e-14;4!UBERON:0000923;1.72e-14;4!UBERON:0010316;1.72e-14;4!UBERON:0005291;1.72e-14;4!UBERON:0002050;8.77e-12;5!UBERON:0005423;8.77e-12;5!UBERON:0002294;2.15e-08;7!UBERON:0001173;2.15e-08;7!UBERON:0003714;5.37e-08;2!UBERON:0002702;5.37e-08;2!UBERON:0005162;5.37e-08;2!UBERON:0000122;5.37e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.17e-15,1;UBERON:0001785,8.17e-15,1;UBERON:0002464,8.17e-15,1;UBERON:0004904,8.17e-15,1;UBERON:0001021,8.17e-15,1;UBERON:0003902,8.17e-15,1;UBERON:0005425,8.17e-15,1;UBERON:0001016,1.74e-08,89;UBERON:0003714,4.69e-08,2;UBERON:0005162,4.69e-08,2;UBERON:0000122,4.69e-08,2;UBERON:0002702,5.37e-08,2;UBERON:0001017,2.72e-07,81;UBERON:0002294,9.93e-07,9;UBERON:0001173,9.93e-07,9;UBERON:0004912,9.93e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.502548796003046,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.613612095012929,0,0,0,1.61119057208048,0,0,0,0,1.93866549219044,1.02044907978036,3.99227596002388,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0.876214728748802,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.34823682632161,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.50648636764703,1.75996244461323,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0.546746009922222,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.854183854313742,0.500763722825999,0,0,0.248385611765534,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0.169732529954025,5.52694792264376,2.85052257795705,0.558644917973244,0,0,0,0,0,0.256916900385838,0,0.638535436228605,1.02558182120378,0.504143392443436,0.414943514785307,0.161475645631851,2.85538840518309,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.206686796501184,0.887821342714695,4.92277328116398,0,0,0.351742488719241,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0.657727735628491,0,0.111231401892069,0,0.471346769748006,0,0,0,0,0,0,0,2.26015753993353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.143339583151451,0,0.475940431336403,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p6@VAX1 | |||
}} |
Revision as of 05:11, 11 January 2014
Short description: | p6@VAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VAX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000277905, ENST00000369206, NM_001112704, NM_199131, uc001ldb.1, uc009xyx.2_5end |
EntrezGene: | VAX1 |
HGNC: | 12660 |
UniProt: | Q5SQQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 7.03e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.17e-15 | 1 |
cranial nerve | 8.17e-15 | 1 |
nerve trunk | 8.17e-15 | 1 |
nerve connecting eye with brain | 8.17e-15 | 1 |
nerve | 8.17e-15 | 1 |
retinal neural layer | 8.17e-15 | 1 |
presumptive neural retina | 8.17e-15 | 1 |
nervous system | 1.74e-08 | 89 |
neural tissue | 4.69e-08 | 2 |
multi cell component structure | 4.69e-08 | 2 |
neuron projection bundle | 4.69e-08 | 2 |
middle frontal gyrus | 5.37e-08 | 2 |
central nervous system | 2.72e-07 | 81 |
biliary system | 9.93e-07 | 9 |
biliary tree | 9.93e-07 | 9 |
biliary bud | 9.93e-07 | 9 |