FFCP PHASE1:Hg19::chr14:50506565..50506580,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENST00000553914_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_ENST00000553914_5end | |||
|id=chr14:50506565..50506580,- | |||
|ontology_enrichment_celltype=CL:0002057!1.64e-43!42;CL:0000860!1.48e-39!45;CL:0002009!1.19e-38!65;CL:0002194!1.35e-36!63;CL:0000576!1.35e-36!63;CL:0000040!1.35e-36!63;CL:0000559!1.35e-36!63;CL:0000557!7.29e-34!71;CL:0000766!3.03e-32!76;CL:0000839!3.23e-31!70;CL:0000738!1.92e-24!140;CL:0000763!1.98e-22!112;CL:0000049!1.98e-22!112;CL:0002087!9.22e-22!119;CL:0002031!2.89e-19!124;CL:0000037!1.43e-16!172;CL:0000566!1.43e-16!172;CL:0002032!4.59e-15!165;CL:0000837!4.59e-15!165;CL:0000988!1.56e-14!182;CL:0000063!5.49e-08!578;CL:0000990!9.16e-08!8;CL:0000451!1.09e-07!10;CL:0000453!7.08e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-78;33!CL:0002057;2.69e-78;33!CL:0000473;1.25e-53;39!CL:0000234;1.25e-53;39!CL:0000576;5.10e-43;48!CL:0000766;9.99e-28;69!CL:0000763;2.40e-12;100!CL:0002087;4.23e-12;104!CL:0000767;5.67e-10;3!CL:0000738;8.00e-10;136!CL:0000453;1.07e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.36e-80,42;CL:0002057,2.36e-80,42;CL:0000473,3.65e-69,48;CL:0000234,3.65e-69,48;CL:0002009,3.42e-58,61;CL:0002194,6.54e-57,59;CL:0000576,6.54e-57,59;CL:0000040,6.54e-57,59;CL:0000559,6.54e-57,59;CL:0000766,4.86e-54,72;CL:0000557,3.24e-52,67;CL:0000839,5.45e-50,66;CL:0000763,2.70e-41,108;CL:0000049,2.70e-41,108;CL:0000738,3.76e-36,136;CL:0002087,2.79e-30,115;CL:0000037,3.28e-27,168;CL:0002031,5.68e-27,120;CL:0002032,7.34e-26,161;CL:0000837,7.34e-26,161;CL:0000988,2.81e-25,177;CL:0000134,2.10e-11,354;CL:0002320,5.85e-11,361;CL:0000767,5.85e-10,3;CL:0000453,9.15e-10,5;CL:0000219,2.13e-09,386;CL:0000034,4.98e-08,441;CL:0000723,8.43e-08,433;CL:0000048,1.67e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-59;42!CL:0000049;1.57e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.11e-30!102;UBERON:0003061!5.11e-30!102;UBERON:0002371!1.70e-29!80;UBERON:0001474!1.62e-27!86;UBERON:0002193!1.83e-26!112;UBERON:0004765!8.82e-23!101;UBERON:0001434!8.82e-23!101;UBERON:0002405!3.93e-22!115;UBERON:0003081!8.12e-10!216;UBERON:0002204!7.39e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.32e-45,76;UBERON:0001474,4.63e-41,82;UBERON:0002390,4.30e-37,98;UBERON:0003061,4.30e-37,98;UBERON:0004765,1.28e-36,90;UBERON:0002405,3.77e-35,93;UBERON:0002193,8.66e-33,108;UBERON:0001434,4.62e-32,100;UBERON:0002204,1.29e-15,167;UBERON:0003081,5.18e-14,203;UBERON:0002384,4.59e-11,371;UBERON:0000926,1.51e-07,315;UBERON:0004120,1.51e-07,315;UBERON:0006603,1.51e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0.0787107813136792,5.90046415273356,3.0706351847777,6.50227717927519,0,0,0,0,0,0,13.8498852132969,9.6261334785668,13.237663113667,0,0.32389366601898,0,7.85150489409649,10.2026504795979,9.21819432513701,16.967319694115,16.8578834088949,17.0338503992307,12.9461576544968,22.5421421745609,22.229329609527,54.8145632371223,37.4381116478619,37.9194162464157,11.8592673911841,9.82462140208245,14.1575795200403,52.3403455954243,63.8648763881426,44.7535988059329,6.92687730392104,8.57693727773017,9.80316926225197,55.7201738166881,44.8234327506,49.2029576706504,12.0599359323237,14.6015217157656,12.3797641481916,52.6697567291031,66.6582521137492,84.4954574467161,0,0.212604299965044,0.209658645508376,0.673971786878971,0.750884464207532,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45990461090791,0,0,0.087834785693126,0.130979075497713,0,0,0,0.348259474598534,0.132957960518865,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.548751427043128,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0.246217006087397,0.702012795417713,0.148631162288728,0,0.16798212819886,0.425325291727159,0.53735113621709,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,1.72571360654893,2.24127871387233,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.95497793895076,0,0.921482106297696,0,0,0.111308705022906,10.5474479505126,0,0.19924798825107,0,0,0,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.683652335082007,3.22789466143284,11.1299479068117,2.28159481036217,4.46601623624687,0.915975934018623,13.8589041764845,0,0,0,0,0,0,0,0,0,1.63232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,14.5668227720456,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,1.7638631534588,2.61177619741208,0,0,0,0,0,0.581934098930517,0,0,0.274083849293502,0.19871461170299,0,1.36885967914362,0.64127056201227,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0.209205692624666,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.04953004792701,0.77380195455795,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.339936274560377,0,0,0,0,0,2.81926008926669,0,0,0,0,0.197611631897944,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,2.92290463259083,1.99297260470045,1.4720885483026,0.982829546539238,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0.917142992608395,0,3.05105676373734,0.690359926060101,0,0,2.42046082444224,0,4.45241380618418,0,0.443568258651136,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.887023701626388,0.230467975111559,6.85952037749674,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0.215927591218621,0.9555033757741,0,0,0,0,0,0.62164849248911,0.3414369541879,0,0,0,0,0,0,0.31020638566432,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0.217716747896961,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p1@ENST00000553914 | |||
}} |
Revision as of 19:59, 11 January 2014
Short description: | p1@ENST00000553914 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000553914_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 21bp_to_ENST00000553914_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.36e-80 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.36e-80 | 42 |
defensive cell | 3.65e-69 | 48 |
phagocyte | 3.65e-69 | 48 |
macrophage dendritic cell progenitor | 3.42e-58 | 61 |
monopoietic cell | 6.54e-57 | 59 |
monocyte | 6.54e-57 | 59 |
monoblast | 6.54e-57 | 59 |
promonocyte | 6.54e-57 | 59 |
myeloid leukocyte | 4.86e-54 | 72 |
granulocyte monocyte progenitor cell | 3.24e-52 | 67 |
myeloid lineage restricted progenitor cell | 5.45e-50 | 66 |
myeloid cell | 2.70e-41 | 108 |
common myeloid progenitor | 2.70e-41 | 108 |
leukocyte | 3.76e-36 | 136 |
nongranular leukocyte | 2.79e-30 | 115 |
hematopoietic stem cell | 3.28e-27 | 168 |
hematopoietic lineage restricted progenitor cell | 5.68e-27 | 120 |
hematopoietic oligopotent progenitor cell | 7.34e-26 | 161 |
hematopoietic multipotent progenitor cell | 7.34e-26 | 161 |
hematopoietic cell | 2.81e-25 | 177 |
mesenchymal cell | 2.10e-11 | 354 |
connective tissue cell | 5.85e-11 | 361 |
basophil | 5.85e-10 | 3 |
Langerhans cell | 9.15e-10 | 5 |
motile cell | 2.13e-09 | 386 |
stem cell | 4.98e-08 | 441 |
somatic stem cell | 8.43e-08 | 433 |
multi fate stem cell | 1.67e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.32e-45 | 76 |
bone element | 4.63e-41 | 82 |
hematopoietic system | 4.30e-37 | 98 |
blood island | 4.30e-37 | 98 |
skeletal element | 1.28e-36 | 90 |
immune system | 3.77e-35 | 93 |
hemolymphoid system | 8.66e-33 | 108 |
skeletal system | 4.62e-32 | 100 |
musculoskeletal system | 1.29e-15 | 167 |
lateral plate mesoderm | 5.18e-14 | 203 |
connective tissue | 4.59e-11 | 371 |
mesoderm | 1.51e-07 | 315 |
mesoderm-derived structure | 1.51e-07 | 315 |
presumptive mesoderm | 1.51e-07 | 315 |