FFCP PHASE1:Hg19::chr16:3073503..3073544,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:3073503..3073544,- | |||
|id=chr16:3073503..3073544,- | |||
|ontology_enrichment_celltype=CL:0000055!5.70e-19!180;CL:0000220!5.36e-15!246;CL:0002321!1.92e-14!248;CL:0000066!9.65e-11!254;CL:0000222!1.44e-10!119;CL:0000183!1.50e-09!59;CL:0000680!3.11e-09!57;CL:0000056!3.11e-09!57;CL:0000355!3.11e-09!57;CL:0000057!1.06e-08!75;CL:0000187!1.18e-08!54;CL:0000499!1.79e-08!27;CL:0000393!2.29e-07!60;CL:0000211!2.29e-07!60;CL:0000192!5.04e-07!42;CL:0000514!5.04e-07!42;CL:0000076!5.40e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000499;2.56e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.77e-11,250;CL:0000222,1.11e-08,121;CL:0000680,1.69e-08,58;CL:0000056,1.69e-08,58;CL:0000355,1.69e-08,58;CL:0000499,3.83e-08,28;CL:0000187,7.48e-08,55;CL:0000192,6.66e-07,43;CL:0000514,6.66e-07,43;CL:0000066,8.24e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.76e-18!347;UBERON:0000475!3.88e-18!365;UBERON:0003104!1.10e-14!238;UBERON:0009142!1.10e-14!238;UBERON:0002100!9.55e-14!216;UBERON:0000119!4.31e-12!312;UBERON:0000483!6.34e-12!309;UBERON:0000486!6.48e-12!82;UBERON:0000914!9.19e-12!83;UBERON:0002329!9.19e-12!83;UBERON:0003077!9.19e-12!83;UBERON:0003059!9.19e-12!83;UBERON:0007282!9.19e-12!83;UBERON:0009618!9.19e-12!83;UBERON:0007285!9.19e-12!83;UBERON:0005256!1.20e-11!143;UBERON:0000468!1.36e-11!659;UBERON:0004290!1.40e-10!70;UBERON:0001134!1.63e-10!61;UBERON:0002036!1.63e-10!61;UBERON:0003082!1.63e-10!61;UBERON:0002385!1.82e-10!63;UBERON:0001015!1.82e-10!63;UBERON:0000383!1.82e-10!63;UBERON:0002050!3.37e-09!605;UBERON:0005423!3.37e-09!605;UBERON:0000064!6.27e-09!219;UBERON:0000923!6.31e-09!604;UBERON:0005291!6.31e-09!604;UBERON:0006598!6.31e-09!604;UBERON:0002532!6.31e-09!604;UBERON:0000922!1.02e-08!612;UBERON:0000467!6.41e-08!625;UBERON:0003102!6.74e-08!95;UBERON:0000480!7.83e-08!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.88e-12,160;UBERON:0009142,1.88e-12,160;UBERON:0007503,9.97e-11,78;UBERON:0000486,1.01e-10,83;UBERON:0007524,1.10e-10,73;UBERON:0003077,3.52e-10,72;UBERON:0007285,3.52e-10,72;UBERON:0002100,3.93e-10,199;UBERON:0002329,4.05e-10,71;UBERON:0003059,4.05e-10,71;UBERON:0007282,4.05e-10,71;UBERON:0004290,4.05e-10,71;UBERON:0009618,4.05e-10,71;UBERON:0001134,1.54e-09,62;UBERON:0002036,1.54e-09,62;UBERON:0003082,1.54e-09,62;UBERON:0002385,1.97e-09,64;UBERON:0001015,1.97e-09,64;UBERON:0000383,1.97e-09,64;UBERON:0005256,1.61e-08,122;UBERON:0000119,1.63e-07,309;UBERON:0000483,2.30e-07,306 | |||
|phase1_expression=2.54349730978779,1.49870366723688,1.26858963686374,5.00366491765652,5.36353313312745,3.48935409640147,2.53299878168311,1.26343974685366,0,2.94880723801811,6.97801167972428,0.218441372130172,0,7.05468211872266,8.61633176892581,1.34465029290355,1.80808358407193,1.46062018077475,0,4.18611597461079,5.50801866359483,7.20945859399602,4.86601178122796,1.77936752594749,3.01302335027527,0.152826811495903,0,0,0,0,0.154816123316076,6.43594857135249,3.91567694411725,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0.670700859703636,0.895037932904712,2.1686349143074,3.50936537445123,2.89693037921647,3.1811437882044,7.78615792484217,1.79616152611729,2.66075276955077,3.16205228495254,0.72038491523742,8.37879163072847,7.41568885568859,0,0.174129737299267,0.26591592103773,0,0,0,0.596287222100115,0.860234595106124,0,1.69592382577203,1.25849830862972,1.37559020970034,1.04497483268405,1.03366703667732,0.71153252537342,0,0.402829317109147,0.760272105718513,0.732186172644509,0,0,0.446498641420399,0.44905874525234,0.675668882899933,1.53316637465883,1.89853131913626,1.28241220751285,0,0,6.54141078213801,0.496971951695318,1.39293562831038,0.529636723252875,0.573673241497627,1.06400514659507,7.28880880184999,2.1349799145941,1.97334038733728,1.24484414159907,1.0776853765575,0.653847612453835,1.36221684880438,1.72852777344,2.34321431833797,1.5608003841516,4.56377457235559,1.04614076386261,1.52664848236894,1.78060238804945,1.40450806702248,1.63323337003915,1.47401180774122,3.20309921644873,1.18800285728205,5.43987244412825,2.73048408581408,4.31170885089743,0.841680569770331,1.87677779807946,1.10825646193673,1.31693286264251,0.919463387397059,1.35214253015937,0.453728732640084,0.538168907066586,2.98980344345994,2.33125091275518,0.900273288253207,3.19462840639161,1.03056216018252,2.79175284497385,1.0126579934476,0.876933046450788,1.00973509697646,2.85354685791128,12.7700384886861,0.355009592516614,2.11579406278045,1.3564847384839,0.966304265816484,0.818238361772504,0.286804595389004,0,0.132529768321485,0,0.10366105501537,0.756962552626885,0,0,6.43240938192885,0,6.03678306441573,10.8281922250438,2.72105640091641,2.52877035117153,3.61516544825223,2.97793726377464,2.83243277320128,1.89816495288877,1.61797569792197,2.35465758150415,0.769494313892781,0.738155454624648,1.40241773803446,6.9967581926338,11.7606969108434,0,0,0,0,0.368965315629341,1.20097467208968,1.31700342490351,4.49607013030478,2.21163739305588,2.22212268380471,1.95484983186195,5.19967392639789,0,1.62302566965108,1.87853910777315,0.433099343283221,0,0,1.58040879591855,2.57545848628462,0,0,0.297262324577456,1.87467667973554,0.16798212819886,0.425325291727159,1.70161193135412,2.3250715081117,2.68367875415648,0,0,0.207328115540772,0,0.25248486685276,0.317489471460845,0.763976851116555,2.34434894420094,0,0.616964956219941,2.40274446275134,0,1.00917975910825,1.30788020649984,1.10007428731425,1.16344544182,25.0359512096318,0,1.32969058292435,1.04007436911366,3.60090323966999,4.25547396069835,4.79559922228979,4.00338382242813,9.22456729165453,4.11620168390384,0.65147236858747,3.909311436168,3.16780749173372,3.31583314765545,0.871533458600294,1.29964888536674,0,0,0,1.91699884393266,2.29723871668228,2.85273810081437,1.30303176000821,5.75333703141074,1.61154866915906,0.112085143993527,0,0,0,0.76228387266739,2.60279707715243,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,6.37995756939527,11.0037514633129,3.25518028439683,6.23912584592421,5.17444067511769,5.36188211115378,11.5970000842786,3.91229929646035,13.6444502433591,8.27784570340039,1.99267679560631,0.737476674166813,2.95404289191482,2.74121620447837,2.74514739048685,0,0.215714200818617,0,3.33440328590885,3.32870879020994,3.62868351995616,1.98486246255021,0.153461973288062,2.52594084989766,2.43464383585832,1.02341449813341,1.93024705372329,5.93672265779964,0.616838775210622,0.887808626565635,0.739144404124282,0,1.39452454151951,0.120859449591622,1.20303882181971,1.65745780084613,1.03333003348146,2.00300284807389,3.2781103739856,1.35359883872224,0.770153371044148,3.13739907670742,2.92278449306521,0.422206515571503,1.13733384070897,0.340187410553031,1.94324324491925,0,2.16757150035082,5.01689773854853,1.52925763827023,3.3243040357149,1.11937377361089,0,0.261435451024901,3.33385162651306,4.26419039409617,5.85681110395745,0.206082023295445,0.366277859273374,0.577566499444116,1.72279661398852,2.60024098414608,1.6068392984416,2.32009723901093,2.00263202249038,1.5350367472613,1.37836572484531,2.0409846524972,3.77043404176994,0.93749290157711,1.33548053470106,0.330569830721956,0.576570202095319,0.382838137483752,0.80926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| |||
|short_description=p@chr16:3073503..3073544,- | |||
}} |
Revision as of 01:59, 12 January 2014
Short description: | p@chr16:3073503..3073544, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:3073503..3073544, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.77e-11 | 250 |
mesodermal cell | 1.11e-08 | 121 |
muscle precursor cell | 1.69e-08 | 58 |
myoblast | 1.69e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-08 | 58 |
stromal cell | 3.83e-08 | 28 |
muscle cell | 7.48e-08 | 55 |
smooth muscle cell | 6.66e-07 | 43 |
smooth muscle myoblast | 6.66e-07 | 43 |
epithelial cell | 8.24e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.88e-12 | 160 |
entire embryonic mesenchyme | 1.88e-12 | 160 |
epithelial vesicle | 9.97e-11 | 78 |
multilaminar epithelium | 1.01e-10 | 83 |
dense mesenchyme tissue | 1.10e-10 | 73 |
paraxial mesoderm | 3.52e-10 | 72 |
presumptive paraxial mesoderm | 3.52e-10 | 72 |
trunk | 3.93e-10 | 199 |
somite | 4.05e-10 | 71 |
presomitic mesoderm | 4.05e-10 | 71 |
presumptive segmental plate | 4.05e-10 | 71 |
dermomyotome | 4.05e-10 | 71 |
trunk paraxial mesoderm | 4.05e-10 | 71 |
skeletal muscle tissue | 1.54e-09 | 62 |
striated muscle tissue | 1.54e-09 | 62 |
myotome | 1.54e-09 | 62 |
muscle tissue | 1.97e-09 | 64 |
musculature | 1.97e-09 | 64 |
musculature of body | 1.97e-09 | 64 |
trunk mesenchyme | 1.61e-08 | 122 |
cell layer | 1.63e-07 | 309 |
epithelium | 2.30e-07 | 306 |