FFCP PHASE1:Hg19::chr16:55540071..55540101,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:55540071..55540101,+ | |||
|id=chr16:55540071..55540101,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.99e-30!180;CL:0000057!3.22e-19!75;CL:0000680!3.64e-13!57;CL:0000056!3.64e-13!57;CL:0000355!3.64e-13!57;CL:0000192!2.95e-12!42;CL:0000514!2.95e-12!42;CL:0000183!3.53e-12!59;CL:0000187!1.08e-11!54;CL:0000393!7.00e-10!60;CL:0000211!7.00e-10!60;CL:0002620!1.07e-09!23;CL:0000359!1.87e-09!32;CL:0002334!5.01e-09!12;CL:0000048!8.94e-09!430;CL:0000723!2.29e-08!436;CL:0000034!1.57e-07!444;CL:0002539!9.57e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000499;1.24e-08;28!CL:0000359;4.97e-08;32!CL:0002334;8.25e-08;12!CL:0002539;1.08e-07;10!CL:0000192;3.50e-07;43!CL:0002620;4.23e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.05e-12,76;CL:0000680,2.41e-11,58;CL:0000056,2.41e-11,58;CL:0000355,2.41e-11,58;CL:0000048,7.81e-11,427;CL:0000723,2.28e-10,433;CL:0000187,5.60e-10,55;CL:0000034,9.00e-10,441;CL:0000192,3.03e-09,43;CL:0000514,3.03e-09,43;CL:0000499,1.61e-08,28;CL:0000393,2.09e-08,61;CL:0000211,2.09e-08,61;CL:0000359,2.23e-08,32;CL:0002539,6.31e-08,10;CL:0002334,6.55e-08,12;CL:0002620,4.90e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;3.50e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!3.27e-14!84;UBERON:0000486!6.04e-14!82;UBERON:0004290!8.72e-14!70;UBERON:0001134!5.05e-13!61;UBERON:0002036!5.05e-13!61;UBERON:0003082!5.05e-13!61;UBERON:0002385!3.63e-12!63;UBERON:0001015!3.63e-12!63;UBERON:0000383!3.63e-12!63;UBERON:0000914!7.32e-12!83;UBERON:0002329!7.32e-12!83;UBERON:0003077!7.32e-12!83;UBERON:0003059!7.32e-12!83;UBERON:0007282!7.32e-12!83;UBERON:0009618!7.32e-12!83;UBERON:0007285!7.32e-12!83;UBERON:0001981!1.43e-09!60;UBERON:0007500!1.43e-09!60;UBERON:0004537!1.43e-09!60;UBERON:0006965!1.43e-09!60;UBERON:0002049!1.67e-09!79;UBERON:0007798!1.67e-09!79;UBERON:0001637!1.72e-09!42;UBERON:0003509!1.72e-09!42;UBERON:0004572!1.72e-09!42;UBERON:0005256!1.79e-09!143;UBERON:0002199!2.69e-09!45;UBERON:0002416!2.69e-09!45;UBERON:0004535!3.94e-09!110;UBERON:0001009!7.24e-09!113;UBERON:0004573!1.50e-08!33;UBERON:0004571!1.50e-08!33;UBERON:0000948!2.70e-08!24;UBERON:0005498!2.70e-08!24;UBERON:0004140!2.70e-08!24;UBERON:0009881!2.70e-08!24;UBERON:0004141!2.70e-08!24;UBERON:0003084!2.70e-08!24;UBERON:0007005!2.70e-08!24;UBERON:0004139!2.70e-08!24;UBERON:0004291!2.70e-08!24;UBERON:0003914!3.08e-08!118;UBERON:0002100!3.48e-08!216;UBERON:0000055!4.88e-08!69;UBERON:0000475!5.07e-08!365;UBERON:0002097!5.11e-08!40;UBERON:0000947!1.02e-07!21;UBERON:0010191!1.02e-07!21;UBERON:0003102!1.59e-07!95;UBERON:0007100!2.06e-07!27;UBERON:0004457!2.47e-07!12;UBERON:0000042!2.47e-07!12;UBERON:0004237!9.57e-07!10;UBERON:0004695!9.57e-07!10;UBERON:0002111!9.57e-07!10;UBERON:0004178!9.57e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.33e-09;9!UBERON:0000042;2.33e-09;9!UBERON:0004573;7.85e-08;33!UBERON:0004571;7.85e-08;33!UBERON:0000947;1.00e-07;21!UBERON:0010191;1.00e-07;21!UBERON:0004237;1.08e-07;10!UBERON:0004695;1.08e-07;10!UBERON:0002111;1.08e-07;10!UBERON:0004178;1.08e-07;10!UBERON:0003688;1.41e-07;6!UBERON:0002358;1.41e-07;6!UBERON:0003684;1.41e-07;6!UBERON:0001178;1.41e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.75e-11,73;UBERON:0002329,9.41e-11,71;UBERON:0003059,9.41e-11,71;UBERON:0007282,9.41e-11,71;UBERON:0004290,9.41e-11,71;UBERON:0009618,9.41e-11,71;UBERON:0003077,1.69e-10,72;UBERON:0007285,1.69e-10,72;UBERON:0001134,3.57e-10,62;UBERON:0002036,3.57e-10,62;UBERON:0003082,3.57e-10,62;UBERON:0000486,5.57e-10,83;UBERON:0007503,5.62e-10,78;UBERON:0002385,1.20e-09,64;UBERON:0001015,1.20e-09,64;UBERON:0000383,1.20e-09,64;UBERON:0005256,4.91e-09,122;UBERON:0001637,1.58e-08,42;UBERON:0003509,1.58e-08,42;UBERON:0004572,1.58e-08,42;UBERON:0004573,1.99e-08,33;UBERON:0004571,1.99e-08,33;UBERON:0000926,2.38e-08,315;UBERON:0004120,2.38e-08,315;UBERON:0006603,2.38e-08,315;UBERON:0004872,4.09e-08,83;UBERON:0007500,6.04e-08,59;UBERON:0001981,6.04e-08,59;UBERON:0004537,6.04e-08,59;UBERON:0006965,6.04e-08,59;UBERON:0004237,6.31e-08,10;UBERON:0004695,6.31e-08,10;UBERON:0002111,6.31e-08,10;UBERON:0004178,6.31e-08,10;UBERON:0000947,7.23e-08,21;UBERON:0010191,7.23e-08,21;UBERON:0002100,8.11e-08,199;UBERON:0003688,1.68e-07,6;UBERON:0002358,1.68e-07,6;UBERON:0003684,1.68e-07,6;UBERON:0001178,1.68e-07,6;UBERON:0003104,2.01e-07,160;UBERON:0009142,2.01e-07,160;UBERON:0002199,2.52e-07,46;UBERON:0002416,2.52e-07,46;UBERON:0000055,7.25e-07,68;UBERON:0002049,9.05e-07,78;UBERON:0007798,9.05e-07,78;UBERON:0002097,9.58e-07,41 | |||
|phase1_expression=2.36181893051724,0.428201047781966,6.48390258841467,1.0007329835313,0.446961094427288,1.74467704820074,0,1.89515962028049,0.783556884599516,0,0,0.218441372130172,0.527533956456907,0.618831764800233,0,2.6893005858071,1.80808358407193,2.19093027116212,0.487932798790507,3.81675280038043,0.204000691244253,0.313454721478088,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,14.4575660953827,0.50133791063589,0.724232594804119,2.3858578411533,1.94653948121054,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38856200643038,0.56530794192401,0,0,0,0,0,0,2.81980521976403,0,0,0.367663080345869,0,0.0892997282840798,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,4.17880688493113,1.45650098894541,11.4734648299525,0.709336764396714,0.560677600142307,4.2699598291882,0.98667019366864,0.311211035399766,0.269421344139376,0.326923806226917,4.54072282934794,0,0,0.624320153660641,1.1409436430889,0.896692083310806,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,3.56400857184616,0.741800787835671,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.226864366320042,2.33206526395521,5.12537733164562,7.2056846394251,3.00091096084402,0.618315175430633,1.54584324027377,4.28068769562657,1.68776332241266,0.487185025805993,0.757301322732344,13.3472353031334,0.646584227275248,6.74518225781567,0.201504196455281,1.18692414617341,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,3.21620469096443,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0,1.15493158208859,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17086863031111,3.57656445851882,0,9.0418959638856,2.08014873822732,1.02882949704857,0,0,0.285955987316295,2.71310802695722,0,0,0,0,0,0,0,0,0,0,0,0,4.27910715122155,1.73737568001095,0.205476322550383,3.76028022803781,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.981531933753119,0,0.271265023699736,0,0.178428988797162,0.630809660135739,0.468565659970853,6.3198680942821,0,1.03473071292505,3.32112799267718,0,3.5622281931914,12.5312740776154,1.02943027143257,0,0,0,0,1.66435439510497,0,3.2254015016441,1.84154367945675,0.841980283299221,14.0953064181271,7.67560873600055,1.76939313257968,1.48418066444991,0.308419387605311,1.24293207719189,1.31403449622095,0.519254429183621,0.697262270759755,0,0.40101294060657,0,1.26295892981067,0.182091168006717,1.18011973463482,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,1.6068392984416,1.54673149267395,0,0,0,0.966782203814463,0,0,1.24644849905432,0.165284915360978,0,0.127612712494584,0,1.39453664789186,17.3146790756852,0,1.84820148105653,0.532306030317022,5.21959795245044,11.490101584443,0,0.744316738719335,2.53103539774981,0.190630193923825,1.535386747868,0,1.90921948755562,0,0.539617372749944,0,0.117812402345686,5.0545620393329,0,0.421258456238981,0.975267478179181,0.243713489631284,0,3.8219975194236,1.41405431953713,1.13008116620243,1.65409603063837,0,0.438450885253763,1.73632660280006,0,1.42037263873893,0.6196469961995,0.281695602532241,0,0,1.07001315444375,0.709522128141196,2.53329162357197,7.90307743103764,0.75894634753143,0,0,0,0,0.188287601553558,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,1.55519793830904,0,0,0,2.07151151837561,0,2.22273980289274,0,0,0,0,0,1.44999915086959,0.227586896570999,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.38510465306835,0.797594390929008,0,0.0897576444097721,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.64285107034069,0,0,0,0,0,0,0,2.35746944122336,0,0,0,0.52418000472609,0,0,0,0,1.06687918137261,0,0.677942222341597,0.137041924646751,0,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,1.12198039399954,2.02265412931063,0,0,0,0,0,1.11712960508902,0.916641696046735,2.15361907373044,0.199679000498991,0,0,0.201550417460179,1.08089965062721,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0.653174720218818,0,0,1.36310417428337,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42732666772484,0,0,0,1.34329322598187,0.233713309847224,0.554805861502613,1.13641803165053,0.754703705257725,0.889811221596536,1.83072054717539,0.604923695052956,1.08806040407946,0.887130899937803,0.318593534327405,2.69881867298163,0.621051827505038,2.90294345488599,1.59505028734797,0.521745061811734,0.901545653983311,0.761610424337591,0,0.545545977607678,0.429642228169954,1.39210127963548,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| |||
|short_description=p@chr16:55540071..55540101,+ | |||
}} |
Revision as of 03:39, 12 January 2014
Short description: | p@chr16:55540071..55540101, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:55540071..55540101, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.05e-12 | 76 |
muscle precursor cell | 2.41e-11 | 58 |
myoblast | 2.41e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.41e-11 | 58 |
multi fate stem cell | 7.81e-11 | 427 |
somatic stem cell | 2.28e-10 | 433 |
muscle cell | 5.60e-10 | 55 |
stem cell | 9.00e-10 | 441 |
smooth muscle cell | 3.03e-09 | 43 |
smooth muscle myoblast | 3.03e-09 | 43 |
stromal cell | 1.61e-08 | 28 |
electrically responsive cell | 2.09e-08 | 61 |
electrically active cell | 2.09e-08 | 61 |
vascular associated smooth muscle cell | 2.23e-08 | 32 |
aortic smooth muscle cell | 6.31e-08 | 10 |
preadipocyte | 6.55e-08 | 12 |
skin fibroblast | 4.90e-07 | 23 |