FFCP PHASE1:Hg19::chr17:32584096..32584112,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C874 | |||
|description=CAGE_peak_at_chr17:32584096..32584112,+ | |||
|id=chr17:32584096..32584112,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.64e-18!63;CL:0000576!2.64e-18!63;CL:0000040!2.64e-18!63;CL:0000559!2.64e-18!63;CL:0002009!1.72e-17!65;CL:0000839!4.88e-17!70;CL:0002057!7.46e-17!42;CL:0000557!1.11e-16!71;CL:0000860!2.61e-15!45;CL:0000766!4.91e-15!76;CL:0000235!1.02e-09!10;CL:0000048!1.29e-08!430;CL:0000723!3.03e-08!436;CL:0000359!7.76e-08!32;CL:0000034!9.08e-08!444;CL:0000763!1.03e-07!112;CL:0000049!1.03e-07!112;CL:0002144!7.44e-07!3;CL:0002031!7.53e-07!124;CL:0002087!9.16e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.68e-25;39!CL:0000234;5.68e-25;39!CL:0000860;1.44e-22;33!CL:0002057;1.44e-22;33!CL:0000576;6.97e-12;48!CL:0000235;2.50e-11;6!CL:0002138;4.21e-11;6!CL:0000766;3.83e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.77e-26,48;CL:0000234,6.77e-26,48;CL:0002194,3.54e-20,59;CL:0000576,3.54e-20,59;CL:0000040,3.54e-20,59;CL:0000559,3.54e-20,59;CL:0002009,1.93e-19,61;CL:0000860,4.19e-18,42;CL:0002057,4.19e-18,42;CL:0000839,8.69e-18,66;CL:0000557,1.74e-17,67;CL:0000766,4.20e-16,72;CL:0000235,2.14e-11,6;CL:0005020,3.37e-11,6;CL:0002138,3.37e-11,6;CL:0005022,3.37e-11,6;CL:0000763,6.75e-10,108;CL:0000049,6.75e-10,108;CL:0002087,3.87e-09,115;CL:0002031,1.19e-08,120;CL:0000738,2.47e-07,136;CL:0000359,4.22e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;3.54e-12;42!CL:0005022;4.21e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.40e-16!216;UBERON:0002204!8.22e-16!167;UBERON:0002371!5.09e-15!80;UBERON:0001474!2.20e-13!86;UBERON:0002405!2.90e-13!115;UBERON:0004765!7.13e-13!101;UBERON:0001434!7.13e-13!101;UBERON:0002193!4.58e-12!112;UBERON:0000055!1.25e-11!69;UBERON:0002390!5.23e-10!102;UBERON:0003061!5.23e-10!102;UBERON:0001637!1.43e-09!42;UBERON:0003509!1.43e-09!42;UBERON:0004572!1.43e-09!42;UBERON:0002049!2.63e-09!79;UBERON:0007798!2.63e-09!79;UBERON:0001981!3.33e-09!60;UBERON:0007500!3.33e-09!60;UBERON:0004537!3.33e-09!60;UBERON:0006965!3.33e-09!60;UBERON:0004872!7.63e-09!84;UBERON:0004573!1.12e-08!33;UBERON:0004571!1.12e-08!33;UBERON:0004535!1.60e-07!110;UBERON:0001009!3.89e-07!113;UBERON:0001915!7.44e-07!3;UBERON:0001982!7.44e-07!3;UBERON:0000926!9.00e-07!448;UBERON:0004120!9.00e-07!448;UBERON:0006603!9.00e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.91e-08;8!UBERON:0004536;1.91e-08;8!UBERON:0006558;1.91e-08;8!UBERON:0002465;7.64e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.24e-18,93;UBERON:0002193,3.01e-15,108;UBERON:0002371,3.98e-15,76;UBERON:0002204,4.05e-14,167;UBERON:0001474,7.73e-14,82;UBERON:0004765,2.20e-12,90;UBERON:0003081,3.03e-12,203;UBERON:0002390,3.63e-11,98;UBERON:0003061,3.63e-11,98;UBERON:0001434,6.82e-11,100;UBERON:0001473,1.62e-08,8;UBERON:0004536,1.62e-08,8;UBERON:0006558,1.62e-08,8;UBERON:0000055,2.05e-08,68;UBERON:0000926,3.05e-07,315;UBERON:0004120,3.05e-07,315;UBERON:0006603,3.05e-07,315;UBERON:0002049,3.98e-07,78;UBERON:0007798,3.98e-07,78;UBERON:0002465,6.71e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0,0.309706370895104,8.63077176966451,3.84241059793651,5.43909128743746,0,0,0,0,0.818718450173537,0.898893937780338,1.22433556948361,0.962787081228281,0.639337125799041,0.989553900560148,0.199463657621632,2.13112375266347,1.45104619314292,0.56738522469114,1.86846674698672,2.26123798731069,1.0429658368404,3.04064382587163,1.81619850790011,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,2.41697590265488,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.397227542439656,0.286836620748814,0,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89789408954899,2.31492756288305,1.90254152234598,0,0,0.984868024349589,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,2.43247561282381,2.51128545716063,8.43335757932127,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,2.31986643833309,0,2.55175500661265,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,1.06461206063404,0,1.11194531462352,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0,0.808729926293264,0,0.421258456238981,0,0,0,0,0,0,1.65409603063837,1.32687795048244,0.438450885253763,0,0,1.42037263873893,0,0,0,0,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0.899606224327209,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:32584096..32584112,+ | |||
}} |
Revision as of 14:42, 20 January 2014
Short description: | p@chr17:32584096..32584112, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr17:32584096..32584112, + |
Coexpression cluster: | C874_Monocytederived_CD14_Mast_Lymphatic_Smooth_Neurons_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.77e-26 | 48 |
phagocyte | 6.77e-26 | 48 |
monopoietic cell | 3.54e-20 | 59 |
monocyte | 3.54e-20 | 59 |
monoblast | 3.54e-20 | 59 |
promonocyte | 3.54e-20 | 59 |
macrophage dendritic cell progenitor | 1.93e-19 | 61 |
classical monocyte | 4.19e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.19e-18 | 42 |
myeloid lineage restricted progenitor cell | 8.69e-18 | 66 |
granulocyte monocyte progenitor cell | 1.74e-17 | 67 |
myeloid leukocyte | 4.20e-16 | 72 |
macrophage | 2.14e-11 | 6 |
lymphangioblast | 3.37e-11 | 6 |
endothelial cell of lymphatic vessel | 3.37e-11 | 6 |
vascular lymphangioblast | 3.37e-11 | 6 |
myeloid cell | 6.75e-10 | 108 |
common myeloid progenitor | 6.75e-10 | 108 |
nongranular leukocyte | 3.87e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.19e-08 | 120 |
leukocyte | 2.47e-07 | 136 |
vascular associated smooth muscle cell | 4.22e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.24e-18 | 93 |
hemolymphoid system | 3.01e-15 | 108 |
bone marrow | 3.98e-15 | 76 |
musculoskeletal system | 4.05e-14 | 167 |
bone element | 7.73e-14 | 82 |
skeletal element | 2.20e-12 | 90 |
lateral plate mesoderm | 3.03e-12 | 203 |
hematopoietic system | 3.63e-11 | 98 |
blood island | 3.63e-11 | 98 |
skeletal system | 6.82e-11 | 100 |
lymphatic vessel | 1.62e-08 | 8 |
lymph vasculature | 1.62e-08 | 8 |
lymphatic part of lymphoid system | 1.62e-08 | 8 |
vessel | 2.05e-08 | 68 |
mesoderm | 3.05e-07 | 315 |
mesoderm-derived structure | 3.05e-07 | 315 |
presumptive mesoderm | 3.05e-07 | 315 |
vasculature | 3.98e-07 | 78 |
vascular system | 3.98e-07 | 78 |
lymphoid system | 6.71e-07 | 10 |