FFCP PHASE1:Hg19::chr17:75372485..75372498,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr17:75372485..75372498,- | |||
|id=chr17:75372485..75372498,- | |||
|ontology_enrichment_celltype=CL:0000084!2.32e-41!25;CL:0000827!2.32e-41!25;CL:0000791!1.00e-40!18;CL:0000789!1.00e-40!18;CL:0002420!1.00e-40!18;CL:0002419!1.00e-40!18;CL:0000790!1.00e-40!18;CL:0000625!3.80e-25!11;CL:0000838!6.98e-24!52;CL:0000542!2.75e-23!53;CL:0000051!2.75e-23!53;CL:0000738!4.74e-17!140;CL:0002087!3.80e-16!119;CL:0000624!7.06e-15!6;CL:0002031!5.61e-14!124;CL:0000037!1.42e-13!172;CL:0000566!1.42e-13!172;CL:0000988!3.20e-12!182;CL:0002032!5.75e-12!165;CL:0000837!5.75e-12!165;CL:0000898!4.51e-08!3;CL:0000623!1.28e-07!3;CL:0000825!1.28e-07!3;CL:0000842!2.53e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.35e-59;18!CL:0000789;2.35e-59;18!CL:0002419;2.35e-59;18!CL:0000084;6.12e-42;25!CL:0000625;2.87e-40;11!CL:0000624;8.80e-16;6!CL:0000542;5.61e-10;53!CL:0000898;2.03e-08;3!CL:0002127;2.83e-07;1!CL:0000911;2.83e-07;1!CL:0000814;2.83e-07;1!CL:0000895;6.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.23e-59,18;CL:0000789,2.23e-59,18;CL:0002420,2.23e-59,18;CL:0002419,2.23e-59,18;CL:0000790,2.23e-59,18;CL:0000084,5.89e-42,25;CL:0000827,5.89e-42,25;CL:0000625,3.92e-40,11;CL:0000838,1.44e-21,52;CL:0000542,4.20e-21,53;CL:0000051,4.20e-21,53;CL:0000624,5.79e-16,6;CL:0000893,1.62e-12,2;CL:0002489,1.62e-12,2;CL:0000809,1.62e-12,2;CL:0000808,1.62e-12,2;CL:0000894,1.62e-12,2;CL:0000806,1.62e-12,2;CL:0000807,1.62e-12,2;CL:0000805,1.62e-12,2;CL:0002425,1.62e-12,2;CL:0000898,1.50e-08,3;CL:0002087,5.58e-08,115;CL:0002031,1.58e-07,120;CL:0002127,3.40e-07,1;CL:0000914,3.40e-07,1;CL:0000911,3.40e-07,1;CL:0000814,3.40e-07,1;CL:0002042,3.40e-07,1;CL:0002039,3.40e-07,1;CL:0002040,3.40e-07,1;CL:0002041,3.40e-07,1;CL:0000810,5.45e-07,1;CL:0000895,5.45e-07,1;CL:0002436,5.45e-07,1;CL:0002427,5.45e-07,1;CL:0002428,5.45e-07,1;CL:0002429,5.45e-07,1;CL:0002433,5.45e-07,1;CL:0002431,5.45e-07,1;CL:0002432,5.45e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.35e-59;18!CL:0002425;1.56e-12;2!CL:0000051;5.61e-10;53!CL:0002427;6.30e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.04e-14!15;UBERON:0000179!8.04e-14!15;UBERON:0000463!8.04e-14!15;UBERON:0004177!2.36e-11!7;UBERON:0002370!4.80e-10!4;UBERON:0005058!4.80e-10!4;UBERON:0009113!4.80e-10!4;UBERON:0003295!4.80e-10!4;UBERON:0005562!4.80e-10!4;UBERON:0001042!6.07e-08!10;UBERON:0009145!6.07e-08!10;UBERON:0002390!8.46e-08!102;UBERON:0003061!8.46e-08!102;UBERON:0002193!2.66e-07!112;UBERON:0006562!3.79e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.62e-09;15!UBERON:0000179;3.62e-09;15!UBERON:0000463;3.62e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.97e-13,4;UBERON:0005058,1.97e-13,4;UBERON:0009113,1.97e-13,4;UBERON:0003295,1.97e-13,4;UBERON:0005562,1.97e-13,4;UBERON:0000178,3.79e-09,15;UBERON:0000179,3.79e-09,15;UBERON:0000463,3.79e-09,15;UBERON:0003351,4.04e-09,6;UBERON:0004177,6.99e-08,7;UBERON:0005057,6.99e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.983548850569165,2.75107533924415,5.34563897398724,0.83593247695339,0.651844533267181,1.89379122293893,0,1.55974639639243,1.76763544484902,2.21533894583621,0.541607727530031,0.512365278902701,1.04047478047903,2.63100647365882,3.31620021343018,3.47763702882063,3.11401782640327,3.47803076516627,2.09071047609954,4.07913633711238,1.53288197440768,4.12352934579156,2.53019692019503,1.27426165729639,1.95325036156926,0.950452044448374,1.80690142893327,2.17577238962511,1.24930726552346,1.18388626022008,3.28451198768419,1.20964045934839,0.267440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01753259188349,0.394061520403854,1.50939302401662,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,0.476463550915578,1.64544909234478,1.94541993357815,1.08006287447623,0,0,0,0,0,0,0.355709216742071,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322944549180031,1.48979314310059,0,0,0,0.435433495793923,0,0.5388164241167,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:75372485..75372498,- | |||
}} |
Revision as of 17:34, 20 January 2014
Short description: | p@chr17:75372485..75372498, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:75372485..75372498, - |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.97e-13 | 4 |
hemolymphoid system gland | 1.97e-13 | 4 |
thymic region | 1.97e-13 | 4 |
pharyngeal gland | 1.97e-13 | 4 |
thymus primordium | 1.97e-13 | 4 |
blood | 3.79e-09 | 15 |
haemolymphatic fluid | 3.79e-09 | 15 |
organism substance | 3.79e-09 | 15 |
pharyngeal epithelium | 4.04e-09 | 6 |
hemopoietic organ | 6.99e-08 | 7 |
immune organ | 6.99e-08 | 7 |