FFCP PHASE1:Hg19::chr17:77813257..77813290,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8535 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1554 | |||
|TSSclassifier=strong | |||
|UniProt=O00257 | |||
|association_with_transcript=-29bp_to_ENST00000269397_5end | |||
|description=CAGE_peak_2_at_CBX4_5end | |||
|id=chr17:77813257..77813290,- | |||
|ontology_enrichment_celltype=CL:0000791!2.33e-09!18;CL:0000789!2.33e-09!18;CL:0002420!2.33e-09!18;CL:0002419!2.33e-09!18;CL:0000790!2.33e-09!18;CL:0000084!3.10e-07!25;CL:0000827!3.10e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.90e-09;18!CL:0000789;2.90e-09;18!CL:0002419;2.90e-09;18!CL:0000084;3.59e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.33e-09,18;CL:0000789,2.33e-09,18;CL:0002420,2.33e-09,18;CL:0002419,2.33e-09,18;CL:0000790,2.33e-09,18;CL:0000084,3.10e-07,25;CL:0000827,3.10e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.90e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!9.60e-09!22;UBERON:0001950!2.05e-08!20;UBERON:0001869!9.05e-08!32;UBERON:0002780!2.75e-07!41;UBERON:0001890!2.75e-07!41;UBERON:0006240!2.75e-07!41;UBERON:0001893!6.10e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.02e-08;22!UBERON:0001950;2.23e-08;20!UBERON:0001869;2.88e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.60e-09,22;UBERON:0001950,2.05e-08,20;UBERON:0001869,9.05e-08,32;UBERON:0002780,2.75e-07,41;UBERON:0001890,2.75e-07,41;UBERON:0003080,2.75e-07,41;UBERON:0006240,2.75e-07,41;UBERON:0000073,5.45e-07,53;UBERON:0002616,5.45e-07,53;UBERON:0001893,6.10e-07,34 | |||
|phase1_expression=4.72363786103447,3.42560838225573,6.48390258841467,5.00366491765652,2.68176656656373,5.23403114460221,7.59899634504932,3.79031924056099,3.3954131665979,4.42321085702716,6.97801167972428,4.36882744260345,3.69273769519835,4.82688776544182,5.30235801164665,2.6893005858071,0.602694528023977,2.19093027116212,2.43966399395253,5.78668972960903,4.48801520737357,7.20945859399602,2.28988789704845,3.69560947696787,1.63205431473244,7.71775398054308,7.14275128214528,7.00525953691745,16.1279353508051,12.2825407391108,12.6949221119182,5.51652734687356,6.6265302131215,12.9413903558376,1.08454080812422,1.56386155736164,9.9824149373848,6.64794490238253,9.82667792603694,13.0206522429511,2.23915474239924,3.2389366601898,1.80302897343931,1.30858414901608,2.26725566213286,1.4555043671269,0.464858073811369,0.822335776043652,0.929119112685311,1.1507695692886,1.0246428261164,0.236482229888585,2.06847408441971,5.16387746867061,4.06279459783025,2.44715041405386,1.09162460023138,1.79778787556068,1.83650335422542,2.56743221660875,5.11469700639233,0.659702600373432,0.598390972864896,1.27867425159808,2.32167390902867,0,1.24564449799115,0.75374599577023,1.0429658368404,1.73751075764093,1.21079900526674,0.368277635987565,0.949387162322653,7.6051903072299,8.2915676986367,6.9187353017764,9.32327638515909,10.6625593917469,7.23265140136861,5.98526761856622,6.16641699317179,5.84525292046829,7.03984977845291,6.00752472388345,7.11607403090844,3.84057200309856,4.00395987036012,5.17277195959035,9.91567309177293,4.77026877267682,9.67662047486062,7.6340834618222,6.88091810625412,7.93027971474155,7.8471198817415,3.423993102076,19.8676867814971,13.7553766962208,16.4481199199607,9.1952572464873,12.3850461320764,15.6237775892462,15.5861382726329,7.79873198196215,14.435689466267,11.9628303075155,12.1861738694257,9.73494029915131,9.62439171943099,9.20852265780586,7.18510046243206,6.37566788617116,11.1214922371545,11.2367147797679,9.40819714244791,8.0449633315272,10.7301738208538,6.8725489096526,8.6026695286631,12.4240511586398,8.46408490013344,14.2567806667256,8.73335690651082,7.55121005811069,9.99445812418767,10.1814218378927,9.03240796613151,14.314078768956,17.918493117495,19.1168213125295,4.87613732627923,4.02420515822182,3.96373941714944,3.61439152384566,6.51739283826656,4.05570253090306,5.5670016293577,5.35298357332899,1.70162670895322,2.66075276955077,2.28370442802128,5.95954793514592,13.1146303785315,9.26961106961073,4.21911611751088,4.52737316978095,3.72282289452822,43.4052936235722,33.7476997360275,34.17409012232,3.7764857399674,4.30117297553062,2.42998351125316,4.52246353539208,3.77549492588915,4.67700671298115,3.55291443112578,3.87625138753993,2.49036383880697,1.33888245105868,5.63961043952806,2.28081631715554,6.58967555380058,3.30896772311282,1.62028389576352,3.03619076165871,4.71511682514957,3.37834441449967,0,4.74632829784064,3.66403487860815,19.7670626154095,31.022421131866,10.9023513035634,3.97577561356255,3.41902381494365,3.70745706277013,3.72887606973458,3.90135220418193,1.68203280042692,3.20246987189115,5.18001851676036,5.60179863719579,4.17603083416033,2.94231425604226,6.35701196108712,1.15235184896,9.84150013701946,4.68240115245481,6.27519003698894,6.42629326372745,4.22764195117554,3.56120477609889,4.07307339436521,4.08308342509786,2.7023549808589,6.61284999524899,4.75201142912821,4.45080472701402,11.8320977051943,19.4026898290384,3.70339450698946,3.503318556415,6.64953877162039,3.5118209670467,3.98434134538726,4.95785594391769,2.94923676216055,3.58779271377724,2.56268866582281,3.81477422087211,4.50136644126603,4.63736381572975,6.1833729610951,4.28068769562657,5.40084263172052,4.57953924257634,5.04867548488229,4.32634523618807,3.71785930683267,1.77504796258307,3.22406714328449,3.39121184620975,2.70565194428616,2.45471508531751,2.00763216772303,1.46368447355514,1.32529768321485,1.51052125730374,2.48786532036889,1.26160425437814,0.36497735907583,1.56449532329816,5.78916844373597,6.90674606762403,6.03678306441573,4.33127689001751,3.43089720115547,4.72037132218685,3.13314338848527,3.52940712743661,5.22910665821775,4.27087114399974,1.75280700608214,1.56977172100277,1.53898862778556,4.42893272774789,5.60967095213783,3.7041661019826,5.88034845542168,3.80265104465493,0.982827216677626,1.77236972004421,7.94633578946371,2.7057456479485,2.91665277507493,5.5972645558399,8.99214026060957,5.2275065654048,4.62942225792648,8.14520763275812,10.3993478527958,0,2.66639931442677,4.22671299248958,4.33099343283221,2.77791307545966,2.47330397904978,7.11183958163348,10.3018339451385,4.18568910348575,4.21207677250628,4.16167254408439,0.93733833986777,3.19166043577833,1.55952606966625,4.38836761243957,4.94077695473735,6.13412286664338,1.97065295158377,8.98094026934906,15.5496086655579,18.735593944205,11.8667887420797,6.03229995775606,8.78573378784039,11.7217447210047,8.55362230113526,4.8328921570562,4.80548892550268,5.43070221998099,5.60655421726804,4.3596006883328,4.03360572015225,3.36106460970222,25.0359512096318,1.690605505112,3.1912573990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| |||
|short_description=p2@CBX4 | |||
}} |
Revision as of 17:49, 20 January 2014
Short description: | p2@CBX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CBX4_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000269397_5end |
EntrezGene: | CBX4 |
HGNC: | 1554 |
UniProt: | O00257 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.33e-09 | 18 |
alpha-beta T cell | 2.33e-09 | 18 |
immature T cell | 2.33e-09 | 18 |
mature T cell | 2.33e-09 | 18 |
immature alpha-beta T cell | 2.33e-09 | 18 |
T cell | 3.10e-07 | 25 |
pro-T cell | 3.10e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 9.60e-09 | 22 |
neocortex | 2.05e-08 | 20 |
cerebral hemisphere | 9.05e-08 | 32 |
regional part of forebrain | 2.75e-07 | 41 |
forebrain | 2.75e-07 | 41 |
anterior neural tube | 2.75e-07 | 41 |
future forebrain | 2.75e-07 | 41 |
regional part of nervous system | 5.45e-07 | 53 |
regional part of brain | 5.45e-07 | 53 |
telencephalon | 6.10e-07 | 34 |