FFCP PHASE1:Hg19::chr18:47376170..47376195,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4645 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7603 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_uc002ldz.2_5end | |||
|coexpression_cluster_id=C2462 | |||
|description=CAGE_peak_5_at_MYO5B_5end | |||
|id=chr18:47376170..47376195,- | |||
|ontology_enrichment_celltype=CL:0000066!2.10e-60!254;CL:0000076!5.23e-15!62;CL:0002076!1.14e-13!43;CL:0000223!2.27e-13!59;CL:0000220!1.91e-12!246;CL:0002321!1.92e-12!248;CL:0000082!1.29e-09!19;CL:1000497!1.71e-07!18;CL:0002518!1.71e-07!18;CL:0000077!3.76e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.44e-11;17!CL:0002518;3.44e-11;17!CL:1000507;2.91e-09;10!CL:1000494;2.91e-09;10!CL:0002076;4.11e-09;42!CL:0000082;5.60e-09;19!CL:1000449;1.42e-08;15!CL:0002368;2.20e-08;13!CL:0002202;6.67e-08;9!CL:0002632;6.67e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.83e-47,253;CL:0002076,4.60e-12,42;CL:1000497,5.41e-11,17;CL:0002518,5.41e-11,17;CL:0000223,5.63e-11,58;CL:1000507,3.86e-09,10;CL:1000494,3.86e-09,10;CL:0000082,6.62e-09,19;CL:1000449,2.18e-08,15;CL:0002368,2.97e-08,13;CL:0002202,8.46e-08,9;CL:0002632,8.46e-08,9;CL:0000076,7.20e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.03e-14;29 | |||
|ontology_enrichment_disease=DOID:305!4.05e-35!106;DOID:0050687!1.21e-28!143;DOID:162!5.09e-19!235;DOID:14566!6.42e-19!239;DOID:1749!3.34e-09!14;DOID:1324!2.77e-08!15;DOID:299!3.05e-08!25;DOID:0050615!1.71e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.24e-08;14!DOID:305;1.74e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.99e-30,106;DOID:0050687,8.53e-22,143;DOID:162,5.58e-16,235;DOID:14566,2.99e-15,239;DOID:1749,4.53e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-19!169;UBERON:0000925!1.11e-19!169;UBERON:0006595!1.11e-19!169;UBERON:0001007!2.78e-17!155;UBERON:0001555!2.78e-17!155;UBERON:0007026!2.78e-17!155;UBERON:0008947!7.73e-17!38;UBERON:0003258!7.73e-17!38;UBERON:0000065!1.80e-15!53;UBERON:0004921!2.54e-15!129;UBERON:0004185!2.54e-15!129;UBERON:0001004!2.88e-13!72;UBERON:0005911!4.53e-13!82;UBERON:0000072!1.05e-12!46;UBERON:0000077!1.40e-12!130;UBERON:0000063!2.74e-12!97;UBERON:0005153!3.43e-12!37;UBERON:0005177!2.61e-11!107;UBERON:0001041!3.77e-11!98;UBERON:0001048!6.94e-11!168;UBERON:0002048!1.52e-10!22;UBERON:0000117!1.52e-10!22;UBERON:0000171!1.52e-10!22;UBERON:0000170!1.52e-10!22;UBERON:0005597!1.52e-10!22;UBERON:0000118!1.52e-10!22;UBERON:0000481!5.17e-10!347;UBERON:0004802!1.29e-09!19;UBERON:0000115!1.29e-09!19;UBERON:0000064!1.58e-09!219;UBERON:0005157!2.05e-09!51;UBERON:0000466!7.85e-09!126;UBERON:0005178!9.96e-09!34;UBERON:0002224!9.96e-09!34;UBERON:0006554!1.17e-08!44;UBERON:0003104!1.51e-08!238;UBERON:0009142!1.51e-08!238;UBERON:0004807!1.71e-08!28;UBERON:0000058!2.42e-08!26;UBERON:0009569!2.64e-08!113;UBERON:0001008!2.89e-08!45;UBERON:0005181!2.94e-08!35;UBERON:0001737!3.29e-08!9;UBERON:0000464!4.02e-08!104;UBERON:0002113!3.19e-07!27;UBERON:0003918!3.19e-07!27;UBERON:0005095!3.19e-07!27;UBERON:0007687!3.19e-07!27;UBERON:0007625!3.39e-07!11;UBERON:0002294!3.42e-07!7;UBERON:0001173!3.42e-07!7;UBERON:0004912!3.42e-07!7;UBERON:0000922!6.82e-07!612;UBERON:0000467!7.43e-07!625;UBERON:0000480!9.19e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.84e-14;37!UBERON:0001737;8.28e-13;9!UBERON:0001557;8.28e-13;9!UBERON:0004807;3.03e-12;22!UBERON:0000065;4.72e-12;44!UBERON:0002113;5.97e-10;24!UBERON:0011143;5.97e-10;24!UBERON:0004211;2.91e-09;10!UBERON:0009773;2.91e-09;10!UBERON:0001231;2.91e-09;10!UBERON:0004810;2.91e-09;10!UBERON:0004802;5.60e-09;19!UBERON:0000115;5.60e-09;19!UBERON:0002294;7.39e-09;7!UBERON:0001173;7.39e-09;7!UBERON:0000489;8.65e-09;29!UBERON:0006555;1.42e-08;15!UBERON:0004819;1.42e-08;15!UBERON:0001285;1.42e-08;15!UBERON:0007684;1.42e-08;15!UBERON:0006554;2.27e-08;30!UBERON:0001008;2.27e-08;30!UBERON:0001004;8.33e-08;65!UBERON:0005911;1.48e-07;36!UBERON:0002048;2.22e-07;22!UBERON:0000117;2.22e-07;22!UBERON:0000171;2.22e-07;22!UBERON:0000170;2.22e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,8.08e-17,38;UBERON:0003258,8.08e-17,38;UBERON:0001007,2.77e-14,145;UBERON:0001555,2.77e-14,145;UBERON:0007026,2.77e-14,145;UBERON:0000072,1.79e-13,47;UBERON:0000065,3.76e-13,54;UBERON:0001737,3.84e-13,9;UBERON:0004119,3.84e-13,160;UBERON:0000925,3.84e-13,160;UBERON:0006595,3.84e-13,160;UBERON:0004921,4.15e-12,118;UBERON:0005177,2.64e-11,101;UBERON:0001004,3.10e-11,74;UBERON:0001041,1.69e-09,87;UBERON:0004810,3.86e-09,10;UBERON:0004802,6.62e-09,19;UBERON:0000115,6.62e-09,19;UBERON:0004807,9.33e-09,28;UBERON:0002113,1.02e-08,26;UBERON:0003918,1.02e-08,26;UBERON:0011143,1.02e-08,26;UBERON:0005095,1.02e-08,26;UBERON:0007687,1.02e-08,26;UBERON:0004211,2.18e-08,15;UBERON:0009773,2.18e-08,15;UBERON:0001231,2.18e-08,15;UBERON:0001285,2.18e-08,15;UBERON:0007684,2.18e-08,15;UBERON:0004208,2.18e-08,15;UBERON:0001048,7.48e-08,160;UBERON:0005153,8.21e-08,37;UBERON:0000489,8.60e-08,31;UBERON:0006555,9.94e-08,16;UBERON:0004819,9.94e-08,16;UBERON:0002048,2.55e-07,22;UBERON:0000117,2.55e-07,22;UBERON:0000171,2.55e-07,22;UBERON:0000170,2.55e-07,22;UBERON:0005597,2.55e-07,22;UBERON:0000118,2.55e-07,22;UBERON:0009569,3.59e-07,112;UBERON:0005911,3.68e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,1.39560233594486,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.492484232307152,0.204000691244253,0,0,0.273748850145768,0,0,0,0,0,0,0,3.67768489791571,0,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,1.10864698731282,1.84453049955565,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0,0.516833518338658,1.06729878806013,0.33472061276467,1.20848795132744,0.760272105718513,0,0.367663080345869,0,0.803697554556718,0.44905874525234,0.900891843866578,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,3.47869535693934,3.00020732649918,1.72082757233402,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,2.12952240071719,2.52877035117153,1.92808823906786,2.20587945464788,1.96091499683166,2.37270619111097,2.83145747136345,3.72820783738158,2.69323009862473,0.738155454624648,0,0,0,0,0,0,0,1.35287282397425,0.514703430895577,1.31700342490351,3.37205259772859,2.41269533787914,2.03694579348765,0,0,2.88662684050547,0.231860809950154,0.469634776943287,0,0,0,0,0.858486162094873,0,0,0,3.74935335947108,8.06314215354526,2.1266264586358,4.92571874865666,8.4283842169049,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0.909382714338778,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.241718899183244,2.00506470303285,1.74953878978203,0.68888668898764,0,0,2.25599806453706,3.15762882128101,2.35304930753057,1.46139224653261,2.00548094896464,1.13733384070897,0.510281115829547,0.647747748306418,0,1.62567862526312,0,4.58777291481069,0,3.35812132083267,0,0,1.02580050046556,1.64007322849853,0.650756789328606,0.309123034943167,0.0915694648183434,0,1.14853107599234,0.650060246036521,0,1.83674364755032,0.308097234229289,0,0.551346289938122,0,0,0.340906509664404,2.8490251406956,3.14041339185858,0.576570202095319,0.127612712494584,1.4162089319777,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,2.30933070541229,0,2.17781969722645,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,2.84136146806413,2.62618933211459,0,1.84296421259539,0,0,1.66963057534359,0,0,0,1.65770349318689,0,0.613612095012929,0,0,5.66170612228159,8.41399520975363,0,0,0,0,0,0,0,0,0,0,2.27586896570999,1.27126825146383,0.945550727071745,0.344743373241465,0,0,0,0,0,0,0,0,0.544692317594951,25.2356977144272,0.384751292518985,0.91153644677601,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,13.9258722588498,2.93819054686466,0.282706142867882,0,1.99052386215701,14.6839557075543,1.22206028986725,0,0,0,0,0,0,0,4.69595085437015,0,0,0,0,0,5.71228993775072,1.14057010536972,0,0.330991955875499,0.627865836814451,0,0.569219092059585,1.66409607615766,1.73559738335131,4.21367308881824,3.3953090566357,0.17472666824203,0,3.57998425769615,3.80064448848165,4.18788830971367,0.290967049465258,0,0,0.959293472527256,0.19871461170299,0,2.93327074102205,1.52301758477914,4.0556069000477,0.19980960958213,3.16998917739033,0,0,3.74542474769189,0.99402028452346,6.12804490003668,4.07712618220842,5.85775939349066,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.157566364614447,0,0,1.37798474120648,0,0,0,0,0.137539436597234,0,0,0,0,2.34804281319486,0.157611414598396,0.524545881349981,7.07522254680023,0.896436696664224,4.03021914370835,0,0,0,0,0,0,2.39460383124975,0.082092520749339,0,0,0.146552233678082,0,0.129282956361551,0,6.67238667748885,0.704815022316672,0.213574825135389,0.628817220398664,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,1.74972571146949,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.295710299979268,0.318593534327405,0,0.310525913752519,0,0,0,0,0,0,0,0.214821114084977,0,0,2.80019435264208,0,0,0,0.192619830407303,1.92997432237433,0,0.453411851024545,3.00979216620984,1.22368352253234,2.32815493405934,5.86722749605847,1.09642024789354,0.706756583783524,0.192914038270915,0.506827321959218,1.53744911152768,0.690860683462397,1.51929978088691,0,0,0,0,0,0,10.77691829129,0,0,0,1.70254786070051,0.184105950251841,6.294577847375,0,0,0.431299245586727,0,0,0,0,0,0.558644917973244,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0,0,1.57036349601641,0.943757786781923,0.733714394086716,0.924205329202706,0,2.0710797781803,0,0,0.80682027481408,0,0,0.49131575253029,8.57565300058863,0,0,0,0,0,0,0,0,0.383287282918786,0.535701835878287,0,0.606965604236632,0.227662191351298,0.177404740325278,0,0.514464028312255,0,0,0.945550727071746,0.333694205676207,0,0,3.36326595976547,0,3.45484145949794,9.07728206985395,0,0.158013611732727,0,0.173858272302579,0,0,0.17071847709395,0,0,0.354996002191696,0.511280428554946,0,2.97838929107265,0.31020638566432,0,0.223710863595585,5.20196238160788,5.24247077423759,0,0,0,0,3.50909195193158,0,0,5.30846585583112,0,12.9828045467339,21.6087642702245,0.437119121007915,0.470317296361523,0,2.12108892391463,0,0,0,0,0,0,0,1.42843150884526,2.82315897372553,3.12941330087756,0.730336388246517,0,0,0,0,0,2.645134202577,0,0,0,0.126166424835079,0,0.126698501011437,0.509944148709909,0,2.57305718697566,0,0,0,0,0,0.639701945702943,0.476128862927481,0,0,0.224263725161227,0,0,1.30630048738177,0,0.0673520530145875,1.29099969706817,0.665320713092027,1.30245229777559,0.747091421144008,0,3.23370727583713,0,0,0.406896178315738,0,0,0 | |||
|short_description=p5@MYO5B | |||
}} |
Revision as of 19:20, 20 January 2014
Short description: | p5@MYO5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYO5B_5end |
Coexpression cluster: | C2462_cervical_small_colon_clear_embryonic_renal_mucinous |
Association with transcript: | 20bp_to_uc002ldz.2_5end |
EntrezGene: | MYO5B |
HGNC: | 7603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.83e-47 | 253 |
endo-epithelial cell | 4.60e-12 | 42 |
kidney cell | 5.41e-11 | 17 |
kidney epithelial cell | 5.41e-11 | 17 |
endodermal cell | 5.63e-11 | 58 |
kidney tubule cell | 3.86e-09 | 10 |
nephron tubule epithelial cell | 3.86e-09 | 10 |
epithelial cell of lung | 6.62e-09 | 19 |
epithelial cell of nephron | 2.18e-08 | 15 |
respiratory epithelial cell | 2.97e-08 | 13 |
epithelial cell of tracheobronchial tree | 8.46e-08 | 9 |
epithelial cell of lower respiratory tract | 8.46e-08 | 9 |
squamous epithelial cell | 7.20e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.99e-30 | 106 |
cell type cancer | 8.53e-22 | 143 |
cancer | 5.58e-16 | 235 |
disease of cellular proliferation | 2.99e-15 | 239 |
squamous cell carcinoma | 4.53e-08 | 14 |